Coordinate-aware organelle record

Scutellaria guatemalensis chloroplast genome

Available MW420965.1 152,330 bp 132 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

132 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	2	76	74
psbA	gene	photosystem-ii	−	330	1389	1059
trnK-UUU	gene	translation-rna	−	1633	4220	2587
matK	gene	other	−	1923	3468	1545
rps16	gene	ribosomal-protein	−	5142	6314	1172
trnQ-UUC	gene	translation-rna	−	7441	7513	72
psbK	gene	photosystem-ii	+	7837	8023	186
psbI	gene	photosystem-ii	+	8418	8529	111
trnS-GCU	gene	translation-rna	−	8645	8733	88
trnG-CGA	gene	translation-rna	+	9420	10173	753
trnR-UCU	gene	translation-rna	+	10346	10418	72
atpA	gene	atp-synthase	−	10514	12038	1524
atpF	gene	atp-synthase	−	12119	13350	1231
atpH	gene	atp-synthase	−	13713	13959	246
atpI	gene	atp-synthase	−	14942	15686	744
rps2	gene	ribosomal-protein	−	16015	16726	711
rpoC2	gene	rna-polymerase	−	16942	21148	4206
rpoC1	gene	rna-polymerase	−	21293	24125	2832
rpoB	gene	rna-polymerase	−	24151	27364	3213
trnC-GCA	gene	translation-rna	+	28532	28603	71
petN	gene	cytochrome	+	29330	29420	90
psbM	gene	photosystem-ii	−	30409	30523	114
trnD-GUC	gene	translation-rna	−	31049	31123	74
trnY-GUA	gene	translation-rna	−	31236	31320	84
trnE-UUC	gene	translation-rna	−	31379	31452	73
trnT-GGU	gene	translation-rna	+	32027	32099	72
psbD	gene	photosystem-ii	+	33407	34469	1062
psbC	gene	photosystem-ii	+	34416	35838	1422
trnS-UCA	gene	translation-rna	−	36079	36172	93
psbZ	gene	photosystem-ii	+	36491	36680	189
trnG-GCC	gene	translation-rna	+	36951	37022	71
trnfM-CAU	gene	translation-rna	−	37164	37238	74
rps14	gene	ribosomal-protein	−	37387	37690	303
psaB	gene	photosystem-i	−	37817	40022	2205
psaA	gene	photosystem-i	−	40047	42300	2253
ycf3	gene	other	−	42992	44914	1922
trnS-GGA	gene	translation-rna	+	45781	45868	87
rps4	gene	ribosomal-protein	−	46151	46757	606
trnT-UGU	gene	translation-rna	−	47084	47157	73
trnL-UAA	gene	translation-rna	+	47839	48410	571
trnF-GAA	gene	translation-rna	+	48719	48792	73
ndhJ	gene	nad-dehydrogenase	−	49444	49921	477
ndhK	gene	nad-dehydrogenase	−	50028	50706	678
ndhC	gene	nad-dehydrogenase	−	50758	51121	363
trnV-UAC	gene	translation-rna	−	52029	52683	654
trnM-CAU	gene	translation-rna	+	52863	52936	73
atpE	gene	atp-synthase	−	53145	53547	402
atpB	gene	atp-synthase	−	53543	55040	1497
rbcL	gene	other	+	55813	57253	1440
accD	gene	other	+	57976	59455	1479
psaI	gene	photosystem-i	+	60166	60277	111
ycf4	gene	other	+	60716	61271	555
cemA	gene	other	+	61950	62610	660
petA	gene	cytochrome	+	62816	63779	963
pabJ	gene	other	−	64795	64918	123
psbL	gene	photosystem-ii	−	65051	65168	117
psbF	gene	photosystem-ii	−	65191	65311	120
psbE	gene	photosystem-ii	−	65325	65577	252
petL	gene	cytochrome	+	66486	66582	96
petG	gene	cytochrome	+	66757	66871	114
trnW-CCA	gene	translation-rna	−	66989	67063	74
trnP-UGG	gene	translation-rna	−	67218	67292	74
psbJ	gene	photosystem-ii	+	67564	67699	135
rpl33	gene	ribosomal-protein	+	68171	68372	201
rps18	gene	ribosomal-protein	+	68547	68853	306
rpl20	gene	ribosomal-protein	−	69088	69475	387
rps12	gene	ribosomal-protein	−	70262	98401	28139
rps12	gene	ribosomal-protein	+	70262	139091	68829
clpP	gene	other	−	70528	72463	1935
psbB	gene	photosystem-ii	+	72925	74452	1527
psbT	gene	photosystem-ii	+	74643	74751	108
psbN	gene	photosystem-ii	−	74811	74943	132
psbH	gene	photosystem-ii	+	75046	75268	222
petB	gene	cytochrome	+	75393	76764	1371
petD	gene	cytochrome	+	76952	78164	1212
rpoA	gene	rna-polymerase	−	78326	79340	1014
rps11	gene	ribosomal-protein	−	79411	79828	417
rpl36	gene	ribosomal-protein	−	79929	80043	114
infA	gene	other	−	80138	80372	234
rps8	gene	ribosomal-protein	−	80490	80901	411
rpl14	gene	ribosomal-protein	−	81069	81438	369
rpl16	gene	ribosomal-protein	−	81555	82799	1244
rps3	gene	ribosomal-protein	−	82953	83616	663
rpl22	gene	ribosomal-protein	−	83642	84074	432
rps19	gene	ribosomal-protein	−	84133	84412	279
rpl2	gene	ribosomal-protein	−	84467	85950	1483
rpl23	gene	ribosomal-protein	−	85968	86250	282
trnI-CAU	gene	translation-rna	−	86409	86483	74
ycf2	gene	other	+	86571	93381	6810
ycf15	gene	other	+	93522	93720	198
trnL-CAA	gene	translation-rna	−	93980	94061	81
ndhB	gene	nad-dehydrogenase	−	94603	96815	2212
rps7	gene	ribosomal-protein	−	97089	97557	468
trnV-GAC	gene	translation-rna	+	99971	100043	72
rrn16	gene	ribosomal-rna	+	100270	101761	1491
trnI-GAU	gene	translation-rna	+	102059	103078	1019
trnA-UGC	gene	translation-rna	+	103143	104034	891
rrn23	gene	ribosomal-rna	+	104203	107016	2813
rrn4.5	gene	ribosomal-rna	+	107114	107217	103
rrn5	gene	ribosomal-rna	+	107464	107585	121
trnR-ACG	gene	translation-rna	+	107819	107893	74
trnN-GUU	gene	translation-rna	+	108442	108514	72
ndhF	gene	nad-dehydrogenase	−	109590	111831	2241
rpl32	gene	ribosomal-protein	+	112356	112533	177
trnL-UAG	gene	translation-rna	+	112965	113045	80
ccsA	gene	other	+	113151	114126	975
ndhD	gene	nad-dehydrogenase	−	114353	115883	1530
psaC	gene	photosystem-i	−	115982	116228	246
ndhE	gene	nad-dehydrogenase	−	116483	116789	306
ndhG	gene	nad-dehydrogenase	−	117020	117551	531
ndhI	gene	nad-dehydrogenase	−	117902	118403	501
ndhA	gene	nad-dehydrogenase	−	118483	120585	2102
ndhH	gene	nad-dehydrogenase	−	120586	121768	1182
rps15	gene	ribosomal-protein	−	121864	122137	273
ycf1	gene	other	−	122407	127858	5451
trnN-GUU	gene	translation-rna	+	128187	128259	72
trnR-ACG	gene	translation-rna	−	128808	128882	74
rrn5	gene	ribosomal-rna	−	129116	129237	121
rrn4.5	gene	ribosomal-rna	−	129484	129587	103
rrn23	gene	ribosomal-rna	−	129685	132498	2813
trnA-UGC	gene	translation-rna	−	132667	133558	891
trnI-GAU	gene	translation-rna	−	133623	134642	1019
rrn16	gene	ribosomal-rna	−	134940	136431	1491
trnV-GAC	gene	translation-rna	−	136658	136730	72
rps7	gene	ribosomal-protein	+	139144	139612	468
ndhB	gene	nad-dehydrogenase	+	139886	142098	2212
trnL-CAA	gene	translation-rna	+	142640	142721	81
ycf15	gene	other	−	142981	143179	198
ycf2	gene	other	−	143320	150130	6810
trnI-CAU	gene	translation-rna	+	150218	150292	74
rpl23	gene	ribosomal-protein	+	150451	150733	282
rpl2	gene	ribosomal-protein	+	150751	152234	1483

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomeMW420965.1DNA · accDMW420965DNA · atpBMW420965DNA · matKMW420965DNA · ndhFMW420965DNA · psbAMW420965DNA · rbcLMW420965DNA · rps12MW420965DNA · ycf1MW420965