Coordinate-aware organelle record

Scutellaria guttata chloroplast genome

Available PQ058239.1 152,238 bp 132 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

132 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	9	83	74
psbA	gene	photosystem-ii	−	380	1439	1059
trnK-UUU	gene	translation-rna	−	1672	4256	2584
matK	gene	other	−	1962	3489	1527
rps16	gene	ribosomal-protein	−	5153	6312	1159
trnQ-UUG	gene	translation-rna	−	7443	7515	72
psbK	gene	photosystem-ii	+	7839	8025	186
psbI	gene	photosystem-ii	+	8414	8525	111
trnS-GCU	gene	translation-rna	−	8643	8731	88
trnG-UCC	gene	translation-rna	+	9426	10183	757
trnR-UCU	gene	translation-rna	+	10357	10429	72
atpA	gene	atp-synthase	−	10525	12049	1524
atpF	gene	atp-synthase	−	12129	13358	1229
atpH	gene	atp-synthase	−	13716	13962	246
atpI	gene	atp-synthase	−	14949	15693	744
rps2	gene	ribosomal-protein	−	16038	16749	711
rpoC2	gene	rna-polymerase	−	16965	21177	4212
rpoC1	gene	rna-polymerase	−	21331	24159	2828
rpoB	gene	rna-polymerase	−	24185	27398	3213
trnC-GCA	gene	translation-rna	+	28558	28629	71
petN	gene	cytochrome	+	29339	29429	90
psbM	gene	photosystem-ii	−	30520	30625	105
trnD-GUC	gene	translation-rna	−	31150	31224	74
trnY-GUA	gene	translation-rna	−	31337	31421	84
trnE-UUC	gene	translation-rna	−	31480	31553	73
trnT-GGU	gene	translation-rna	+	32128	32200	72
psbD	gene	photosystem-ii	+	33503	34565	1062
psbC	gene	photosystem-ii	+	34512	35934	1422
trnS-UGA	gene	translation-rna	−	36170	36262	92
psbZ	gene	photosystem-ii	+	36577	36766	189
trnG-GCC	gene	translation-rna	+	37042	37113	71
trnfM-CAU	gene	translation-rna	−	37260	37334	74
rps14	gene	ribosomal-protein	−	37488	37791	303
psaB	gene	photosystem-i	−	37919	40124	2205
psaA	gene	photosystem-i	−	40149	42402	2253
ycf3	gene	other	−	43099	45021	1922
trnS-GGA	gene	translation-rna	+	45903	45990	87
rps4	gene	ribosomal-protein	−	46265	46871	606
trnT-UGU	gene	translation-rna	−	47210	47283	73
trnL-UAA	gene	translation-rna	+	47960	48520	560
trnF-GAA	gene	translation-rna	+	48824	48897	73
ndhJ	gene	nad-dehydrogenase	−	49537	50014	477
ndhK	gene	nad-dehydrogenase	−	50122	50800	678
ndhC	gene	nad-dehydrogenase	−	50853	51216	363
trnV-UAC	gene	translation-rna	−	52201	52854	653
trnM-CAU	gene	translation-rna	+	53042	53115	73
atpE	gene	atp-synthase	−	53308	53710	402
atpB	gene	atp-synthase	−	53706	55203	1497
rbcL	gene	other	+	55954	57418	1464
accD	gene	other	+	58143	59622	1479
psaI	gene	photosystem-i	+	60328	60439	111
ycf4	gene	other	+	60864	61419	555
cemA	gene	other	+	62167	62767	600
petA	gene	cytochrome	+	62973	63936	963
psbJ	gene	photosystem-ii	−	64941	65064	123
psbL	gene	photosystem-ii	−	65197	65419	222
psbF	gene	photosystem-ii	−	65337	65457	120
psbE	gene	photosystem-ii	−	65471	65723	252
petL	gene	cytochrome	+	66597	66693	96
petG	gene	cytochrome	+	66868	66982	114
trnW-CCA	gene	translation-rna	−	67100	67174	74
trnP-UGG	gene	translation-rna	−	67344	67418	74
psaJ	gene	photosystem-i	+	67688	67823	135
rpl33	gene	ribosomal-protein	+	68300	68501	201
rps18	gene	ribosomal-protein	+	68675	68981	306
rpl20	gene	ribosomal-protein	−	69215	69602	387
rps12	gene	ribosomal-protein	−	70384	98466	28082
rps12	gene	ribosomal-protein	+	70384	138997	68613
clpP	gene	other	−	70651	72581	1930
psbB	gene	photosystem-ii	+	73039	74566	1527
psbT	gene	photosystem-ii	+	74756	74864	108
psbN	gene	photosystem-ii	−	74924	75056	132
psbH	gene	photosystem-ii	+	75159	75381	222
petB	gene	cytochrome	+	75505	76879	1374
petD	gene	cytochrome	+	77061	78267	1206
rpoA	gene	rna-polymerase	−	78621	79422	801
rps11	gene	ribosomal-protein	−	79493	79910	417
rpl36	gene	ribosomal-protein	−	80011	80125	114
infA	gene	other	−	80219	80453	234
rps8	gene	ribosomal-protein	−	80575	80986	411
rpl14	gene	ribosomal-protein	−	81138	81507	369
rpl16	gene	ribosomal-protein	−	81633	82867	1234
rps3	gene	ribosomal-protein	−	83022	83685	663
rpl22	gene	ribosomal-protein	−	83686	84142	456
rps19	gene	ribosomal-protein	−	84201	84480	279
rpl2	gene	ribosomal-protein	−	84534	86016	1482
rpl23	gene	ribosomal-protein	−	86034	86316	282
trnI-CAU	gene	translation-rna	−	86475	86549	74
ycf2	gene	other	+	86637	93447	6810
ycf15	gene	other	+	93588	93786	198
trnL-CAA	gene	translation-rna	−	94045	94126	81
ndhB	gene	nad-dehydrogenase	−	94668	96880	2212
rps7	gene	ribosomal-protein	−	97154	97622	468
trnV-GAC	gene	translation-rna	+	100037	100109	72
rrn16	gene	ribosomal-rna	+	100335	101826	1491
trnI-GAU	gene	translation-rna	+	102124	103144	1020
rrn23	gene	ribosomal-rna	+	104266	107078	2812
rrn4.5	gene	ribosomal-rna	+	107176	107279	103
rrn5	gene	ribosomal-rna	+	107526	107647	121
trnR-ACG	gene	translation-rna	+	107881	107955	74
trnN-GUU	gene	translation-rna	−	108502	108574	72
ndhF	gene	nad-dehydrogenase	−	109630	111892	2262
rpl32	gene	ribosomal-protein	+	112219	112396	177
trnL-UAG	gene	translation-rna	+	112842	112922	80
ccsA	gene	other	+	113022	113997	975
ndhD	gene	nad-dehydrogenase	−	114253	115756	1503
psaC	gene	photosystem-i	−	115884	116130	246
ndhE	gene	nad-dehydrogenase	−	116385	116691	306
ndhG	gene	nad-dehydrogenase	−	116907	117438	531
ndhI	gene	nad-dehydrogenase	−	117804	118305	501
ndhA	gene	nad-dehydrogenase	−	118385	120507	2122
ndhH	gene	nad-dehydrogenase	−	120508	121690	1182
rps15	gene	ribosomal-protein	−	121786	122059	273
ycf1	gene	other	−	122252	127880	5628
trnN-GUU	gene	translation-rna	+	128098	128170	72
trnR-ACG	gene	translation-rna	−	128717	128791	74
rrn5	gene	ribosomal-rna	−	129025	129146	121
rrn4.5	gene	ribosomal-rna	−	129393	129496	103
rrn23	gene	ribosomal-rna	−	129594	132406	2812
trnA-UGC	gene	translation-rna	−	132575	133464	889
trnI-GAU	gene	translation-rna	−	133528	134548	1020
ycf68	gene	other	−	134099	134393	294
rrn16	gene	ribosomal-rna	−	134846	136337	1491
trnV-GAC	gene	translation-rna	−	136563	136635	72
rps7	gene	ribosomal-protein	+	139050	139518	468
ndhB	gene	nad-dehydrogenase	+	139792	142004	2212
trnL-CAA	gene	translation-rna	+	142546	142627	81
ycf15	gene	other	−	142886	143084	198
ycf2	gene	other	−	143225	150035	6810
trnI-CAU	gene	translation-rna	+	150123	150197	74
rpl23	gene	ribosomal-protein	+	150356	150638	282
rpl2	gene	ribosomal-protein	+	150656	152138	1482

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomePQ058239.1DNA · accDPQ058239DNA · atpBPQ058239DNA · matKPQ058239DNA · ndhFPQ058239DNA · psbAPQ058239DNA · rbcLPQ058239DNA · rps12PQ058239DNA · ycf1PQ058239