Coordinate-aware organelle record

Scutellaria hainanensis chloroplast genome

Available PQ075885.1 152,189 bp 133 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

133 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	2	76	74
psbA	gene	photosystem-ii	−	364	1423	1059
trnK-UUU	gene	translation-rna	−	1664	4253	2589
matK	gene	other	−	1959	3495	1536
rps16	gene	ribosomal-protein	−	5135	6303	1168
trnQ-UUG	gene	translation-rna	−	7322	7394	72
psbK	gene	photosystem-ii	+	7718	7904	186
psbI	gene	photosystem-ii	+	8298	8409	111
trnS-GCU	gene	translation-rna	−	8526	8614	88
trnG-UCC	gene	translation-rna	+	9315	10089	774
trnR-UCU	gene	translation-rna	+	10241	10313	72
atpA	gene	atp-synthase	−	10409	11933	1524
atpF	gene	atp-synthase	−	12015	13243	1228
atpH	gene	atp-synthase	−	13598	13844	246
atpI	gene	atp-synthase	−	14839	15583	744
rps2	gene	ribosomal-protein	−	15931	16642	711
rpoC2	gene	rna-polymerase	−	16865	21071	4206
rpoC1	gene	rna-polymerase	−	21225	24050	2825
rpoB	gene	rna-polymerase	−	24076	27289	3213
trnC-GCA	gene	translation-rna	+	28458	28529	71
petN	gene	cytochrome	+	29232	29322	90
psbM	gene	photosystem-ii	−	30355	30460	105
trnD-GUC	gene	translation-rna	−	30986	31060	74
trnY-GUA	gene	translation-rna	−	31173	31257	84
trnE-UUC	gene	translation-rna	−	31316	31389	73
trnT-GGU	gene	translation-rna	+	31965	32037	72
psbD	gene	photosystem-ii	+	33333	34395	1062
psbC	gene	photosystem-ii	+	34342	35764	1422
trnS-UGA	gene	translation-rna	−	36000	36092	92
psbZ	gene	photosystem-ii	+	36411	36600	189
trnG-GCC	gene	translation-rna	+	36871	36942	71
trnfM-CAU	gene	translation-rna	−	37095	37169	74
rps14	gene	ribosomal-protein	−	37318	37621	303
psaB	gene	photosystem-i	−	37748	39953	2205
psaA	gene	photosystem-i	−	39978	42231	2253
ycf3	gene	other	−	42902	44825	1923
trnS-GGA	gene	translation-rna	+	45709	45796	87
rps4	gene	ribosomal-protein	−	46081	46687	606
trnT-UGU	gene	translation-rna	−	47026	47099	73
trnL-UAA	gene	translation-rna	+	47787	48350	563
trnF-GAA	gene	translation-rna	+	48657	48730	73
ndhJ	gene	nad-dehydrogenase	−	49382	49859	477
ndhK	gene	nad-dehydrogenase	−	50002	50644	642
ndhC	gene	nad-dehydrogenase	−	50696	51059	363
trnV-UAC	gene	translation-rna	−	51914	52567	653
trnM-CAU	gene	translation-rna	+	52747	52820	73
atpE	gene	atp-synthase	−	53035	53437	402
atpB	gene	atp-synthase	−	53433	54921	1488
rbcL	gene	other	+	55670	57134	1464
accD	gene	other	+	57872	59348	1476
psaI	gene	photosystem-i	+	59921	60032	111
ycf4	gene	other	+	60465	61020	555
cemA	gene	other	+	61757	62357	600
petA	gene	cytochrome	+	62563	63526	963
psbJ	gene	photosystem-ii	−	64560	64683	123
psbL	gene	photosystem-ii	−	64816	65038	222
psbF	gene	photosystem-ii	−	64956	65076	120
psbE	gene	photosystem-ii	−	65090	65342	252
petL	gene	cytochrome	+	66250	66346	96
petG	gene	cytochrome	+	66521	66635	114
trnW-CCA	gene	translation-rna	−	66753	66827	74
trnP-UGG	gene	translation-rna	−	66996	67070	74
psaJ	gene	photosystem-i	+	67342	67477	135
rpl33	gene	ribosomal-protein	+	67950	68151	201
rps18	gene	ribosomal-protein	+	68325	68631	306
rpl20	gene	ribosomal-protein	−	68868	69255	387
rps12	gene	ribosomal-protein	−	70041	98167	28126
rps12	gene	ribosomal-protein	+	70041	138956	68915
clpP	gene	other	−	70309	72241	1932
psbB	gene	photosystem-ii	+	72707	74234	1527
psbT	gene	photosystem-ii	+	74425	74527	102
psbN	gene	photosystem-ii	−	74600	74732	132
psbH	gene	photosystem-ii	+	74835	75057	222
petB	gene	cytochrome	+	75181	76548	1367
petD	gene	cytochrome	+	76736	77938	1202
rpoA	gene	rna-polymerase	−	78312	79113	801
rps11	gene	ribosomal-protein	−	79184	79601	417
rpl36	gene	ribosomal-protein	−	79702	79816	114
infA	gene	other	−	79911	80145	234
rps8	gene	ribosomal-protein	−	80264	80675	411
rpl14	gene	ribosomal-protein	−	80843	81212	369
rpl16	gene	ribosomal-protein	−	81338	82572	1234
rps3	gene	ribosomal-protein	−	82726	83389	663
rpl22	gene	ribosomal-protein	−	83390	83846	456
rps19	gene	ribosomal-protein	−	83905	84184	279
rpl2	gene	ribosomal-protein	−	84238	85721	1483
rpl23	gene	ribosomal-protein	−	85739	86021	282
trnI-CAU	gene	translation-rna	−	86180	86254	74
ycf2	gene	other	+	86342	93152	6810
ycf15	gene	other	+	93293	93491	198
trnL-CAA	gene	translation-rna	−	93746	93827	81
ndhB	gene	nad-dehydrogenase	−	94369	96581	2212
rps7	gene	ribosomal-protein	−	96855	97323	468
trnV-GAC	gene	translation-rna	+	99744	99816	72
rrn16	gene	ribosomal-rna	+	100043	101534	1491
trnI-GAU	gene	translation-rna	+	101832	102853	1021
trnA-UGC	gene	translation-rna	+	102917	103799	882
rrn23	gene	ribosomal-rna	+	103977	106790	2813
rrn4.5	gene	ribosomal-rna	+	106888	106991	103
rrn5	gene	ribosomal-rna	+	107238	107359	121
trnR-ACG	gene	translation-rna	+	107593	107667	74
trnN-GUU	gene	translation-rna	−	108213	108285	72
ndhF	gene	nad-dehydrogenase	−	109361	111602	2241
rpl32	gene	ribosomal-protein	+	112122	112299	177
trnL-UAG	gene	translation-rna	+	112742	112822	80
ccsA	gene	other	+	112918	113893	975
ndhD	gene	nad-dehydrogenase	−	114125	115628	1503
psaC	gene	photosystem-i	−	115746	115992	246
ndhE	gene	nad-dehydrogenase	−	116248	116554	306
ndhG	gene	nad-dehydrogenase	−	116784	117315	531
ndhI	gene	nad-dehydrogenase	−	117679	118180	501
ndhA	gene	nad-dehydrogenase	−	118260	120359	2099
ndhH	gene	nad-dehydrogenase	−	120360	121572	1212
rps15	gene	ribosomal-protein	−	121644	121917	273
ycf1	gene	other	−	122183	127829	5646
trnN-GUU	gene	translation-rna	+	128047	128119	72
trnR-ACG	gene	translation-rna	−	128665	128739	74
rrn5	gene	ribosomal-rna	−	128973	129094	121
rrn4.5	gene	ribosomal-rna	−	129341	129444	103
rrn23	gene	ribosomal-rna	−	129542	132355	2813
trnA-UGC	gene	translation-rna	−	132533	133415	882
trnI-GAU	gene	translation-rna	−	133479	134500	1021
ycf68	gene	other	−	134105	134345	240
rrn16	gene	ribosomal-rna	−	134798	136289	1491
trnV-GAC	gene	translation-rna	−	136516	136588	72
rps7	gene	ribosomal-protein	+	139009	139477	468
ndhB	gene	nad-dehydrogenase	+	139751	141963	2212
trnL-CAA	gene	translation-rna	+	142505	142586	81
ycf15	gene	other	−	142841	143039	198
ycf2	gene	other	−	143180	149990	6810
trnI-CAU	gene	translation-rna	+	150078	150152	74
rpl23	gene	ribosomal-protein	+	150311	150593	282
rpl2	gene	ribosomal-protein	+	150611	152094	1483

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomePQ075885.1DNA · accDPQ075885DNA · atpBPQ075885DNA · matKPQ075885DNA · ndhFPQ075885DNA · psbAPQ075885DNA · rbcLPQ075885DNA · rps12PQ075885DNA · ycf1PQ075885