Coordinate-aware organelle record

Scutellaria hastifolia chloroplast genome

Available MW420934.1 152,333 bp 132 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

132 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	2	76	74
psbA	gene	photosystem-ii	−	379	1438	1059
trnK-UUU	gene	translation-rna	−	1674	4267	2593
matK	gene	other	−	1965	3501	1536
rps16	gene	ribosomal-protein	−	5176	6344	1168
trnQ-UUC	gene	translation-rna	−	7384	7456	72
psbK	gene	photosystem-ii	+	7780	7966	186
psbI	gene	photosystem-ii	+	8356	8467	111
trnS-GCU	gene	translation-rna	−	8585	8673	88
trnG-CGA	gene	translation-rna	+	9232	9992	760
trnR-UCU	gene	translation-rna	+	10166	10238	72
atpA	gene	atp-synthase	−	10334	11858	1524
atpF	gene	atp-synthase	−	11931	13159	1228
atpH	gene	atp-synthase	−	13524	13770	246
atpI	gene	atp-synthase	−	14766	15510	744
rps2	gene	ribosomal-protein	−	15858	16569	711
rpoC2	gene	rna-polymerase	−	16785	20991	4206
rpoC1	gene	rna-polymerase	−	21145	23981	2836
rpoB	gene	rna-polymerase	−	24007	27220	3213
trnC-GCA	gene	translation-rna	+	28386	28457	71
petN	gene	cytochrome	+	29159	29249	90
psbM	gene	photosystem-ii	−	30245	30350	105
trnD-GUC	gene	translation-rna	−	30875	30949	74
trnY-GUA	gene	translation-rna	−	31062	31146	84
trnE-UUC	gene	translation-rna	−	31205	31278	73
trnT-GGU	gene	translation-rna	+	31860	31932	72
psbD	gene	photosystem-ii	+	33240	34302	1062
psbC	gene	photosystem-ii	+	34249	35671	1422
trnS-UCA	gene	translation-rna	−	35915	36008	93
psbZ	gene	photosystem-ii	+	36327	36516	189
trnG-GCC	gene	translation-rna	+	36792	36863	71
trnfM-CAU	gene	translation-rna	−	37007	37081	74
rps14	gene	ribosomal-protein	−	37230	37533	303
psaB	gene	photosystem-i	−	37660	39865	2205
psaA	gene	photosystem-i	−	39890	42143	2253
ycf3	gene	other	−	42818	44740	1922
trnS-GGA	gene	translation-rna	+	45625	45712	87
rps4	gene	ribosomal-protein	−	45997	46603	606
trnT-UGU	gene	translation-rna	−	46943	47016	73
trnL-UAA	gene	translation-rna	+	47701	48271	570
trnF-GAA	gene	translation-rna	+	48577	48650	73
ndhJ	gene	nad-dehydrogenase	−	49298	49775	477
ndhK	gene	nad-dehydrogenase	−	49882	50560	678
ndhC	gene	nad-dehydrogenase	−	50612	50975	363
trnV-UAC	gene	translation-rna	−	51954	52607	653
trnM-CAU	gene	translation-rna	+	52787	52860	73
atpE	gene	atp-synthase	−	53069	53471	402
atpB	gene	atp-synthase	−	53467	54955	1488
rbcL	gene	other	+	55727	57170	1443
accD	gene	other	+	57880	59347	1467
psaI	gene	photosystem-i	+	60063	60174	111
ycf4	gene	other	+	60608	61163	555
cemA	gene	other	+	61851	62511	660
petA	gene	cytochrome	+	62717	63680	963
pabJ	gene	other	−	64697	64820	123
psbL	gene	photosystem-ii	−	64953	65070	117
psbF	gene	photosystem-ii	−	65093	65213	120
psbE	gene	photosystem-ii	−	65227	65479	252
petL	gene	cytochrome	+	66386	66482	96
petG	gene	cytochrome	+	66656	66770	114
trnW-CCA	gene	translation-rna	−	66888	66962	74
trnP-UGG	gene	translation-rna	−	67131	67205	74
psbJ	gene	photosystem-ii	+	67476	67611	135
rpl33	gene	ribosomal-protein	+	68082	68283	201
rps18	gene	ribosomal-protein	+	68457	68763	306
rpl20	gene	ribosomal-protein	−	69000	69387	387
rps12	gene	ribosomal-protein	−	70168	98307	28139
rps12	gene	ribosomal-protein	+	70168	139100	68932
clpP	gene	other	−	70436	72371	1935
psbB	gene	photosystem-ii	+	72845	74372	1527
psbT	gene	photosystem-ii	+	74563	74665	102
psbN	gene	photosystem-ii	−	74738	74870	132
psbH	gene	photosystem-ii	+	74973	75195	222
petB	gene	cytochrome	+	75319	76687	1368
petD	gene	cytochrome	+	76875	78077	1202
rpoA	gene	rna-polymerase	−	78239	79253	1014
rps11	gene	ribosomal-protein	−	79324	79741	417
rpl36	gene	ribosomal-protein	−	79842	79956	114
infA	gene	other	−	80051	80285	234
rps8	gene	ribosomal-protein	−	80404	80815	411
rpl14	gene	ribosomal-protein	−	80973	81342	369
rpl16	gene	ribosomal-protein	−	81468	82712	1244
rps3	gene	ribosomal-protein	−	82866	83529	663
rpl22	gene	ribosomal-protein	−	83530	83986	456
rps19	gene	ribosomal-protein	−	84045	84324	279
rpl2	gene	ribosomal-protein	−	84378	85861	1483
rpl23	gene	ribosomal-protein	−	85879	86161	282
trnI-CAU	gene	translation-rna	−	86320	86394	74
ycf2	gene	other	+	86482	93292	6810
ycf15	gene	other	+	93367	93631	264
trnL-CAA	gene	translation-rna	−	93886	93967	81
ndhB	gene	nad-dehydrogenase	−	94509	96721	2212
rps7	gene	ribosomal-protein	−	96995	97463	468
trnV-GAC	gene	translation-rna	+	99884	99956	72
rrn16	gene	ribosomal-rna	+	100183	101674	1491
trnI-GAU	gene	translation-rna	+	101972	102992	1020
trnA-UGC	gene	translation-rna	+	103057	103944	887
rrn23	gene	ribosomal-rna	+	104113	106926	2813
rrn4.5	gene	ribosomal-rna	+	107024	107127	103
rrn5	gene	ribosomal-rna	+	107374	107495	121
trnR-ACG	gene	translation-rna	+	107729	107803	74
trnN-GUU	gene	translation-rna	+	108349	108421	72
ndhF	gene	nad-dehydrogenase	−	109497	111738	2241
rpl32	gene	ribosomal-protein	+	112254	112431	177
trnL-UAG	gene	translation-rna	+	112875	112955	80
ccsA	gene	other	+	113052	114027	975
ndhD	gene	nad-dehydrogenase	−	114259	115807	1548
psaC	gene	photosystem-i	−	115881	116127	246
ndhE	gene	nad-dehydrogenase	−	116383	116689	306
ndhG	gene	nad-dehydrogenase	−	116919	117450	531
ndhI	gene	nad-dehydrogenase	−	117814	118315	501
ndhA	gene	nad-dehydrogenase	−	118395	120495	2100
ndhH	gene	nad-dehydrogenase	−	120496	121678	1182
rps15	gene	ribosomal-protein	−	121780	122053	273
ycf1	gene	other	−	122322	127866	5544
trnN-GUU	gene	translation-rna	+	128195	128267	72
trnR-ACG	gene	translation-rna	−	128813	128887	74
rrn5	gene	ribosomal-rna	−	129121	129242	121
rrn4.5	gene	ribosomal-rna	−	129489	129592	103
rrn23	gene	ribosomal-rna	−	129690	132503	2813
trnA-UGC	gene	translation-rna	−	132672	133559	887
trnI-GAU	gene	translation-rna	−	133624	134644	1020
rrn16	gene	ribosomal-rna	−	134942	136433	1491
trnV-GAC	gene	translation-rna	−	136660	136732	72
rps7	gene	ribosomal-protein	+	139153	139621	468
ndhB	gene	nad-dehydrogenase	+	139895	142107	2212
trnL-CAA	gene	translation-rna	+	142649	142730	81
ycf15	gene	other	−	142985	143249	264
ycf2	gene	other	−	143324	150134	6810
trnI-CAU	gene	translation-rna	+	150222	150296	74
rpl23	gene	ribosomal-protein	+	150455	150737	282
rpl2	gene	ribosomal-protein	+	150755	152238	1483

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomeMW420934.1DNA · accDMW420934DNA · atpBMW420934DNA · matKMW420934DNA · ndhFMW420934DNA · psbAMW420934DNA · rbcLMW420934DNA · rps12MW420934DNA · ycf1MW420934