Coordinate-aware organelle record

Scutellaria helenae chloroplast genome

Available PQ059306.1 152,278 bp 132 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

132 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	3	77	74
psbA	gene	photosystem-ii	−	379	1438	1059
trnK-UUU	gene	translation-rna	−	1678	4261	2583
matK	gene	other	−	1968	3504	1536
rps16	gene	ribosomal-protein	−	5153	6314	1161
trnQ-UUG	gene	translation-rna	−	7426	7498	72
psbK	gene	photosystem-ii	+	7823	8009	186
psbI	gene	photosystem-ii	+	8403	8514	111
trnS-GCU	gene	translation-rna	−	8634	8722	88
trnG-UCC	gene	translation-rna	+	9402	10160	758
trnR-UCU	gene	translation-rna	+	10334	10406	72
atpA	gene	atp-synthase	−	10502	12026	1524
atpF	gene	atp-synthase	−	12098	13329	1231
atpH	gene	atp-synthase	−	13692	13938	246
atpI	gene	atp-synthase	−	14918	15662	744
rps2	gene	ribosomal-protein	−	16008	16719	711
rpoC2	gene	rna-polymerase	−	16933	21190	4257
rpoC1	gene	rna-polymerase	−	21292	24134	2842
rpoB	gene	rna-polymerase	−	24160	27373	3213
trnC-GCA	gene	translation-rna	+	28533	28604	71
petN	gene	cytochrome	+	29333	29423	90
psbM	gene	photosystem-ii	−	30408	30513	105
trnD-GUC	gene	translation-rna	−	31046	31120	74
trnY-GUA	gene	translation-rna	−	31233	31317	84
trnE-UUC	gene	translation-rna	−	31376	31449	73
trnT-GGU	gene	translation-rna	+	32017	32089	72
psbD	gene	photosystem-ii	+	33397	34459	1062
psbC	gene	photosystem-ii	+	34406	35828	1422
trnS-UGA	gene	translation-rna	−	36063	36155	92
psbZ	gene	photosystem-ii	+	36462	36651	189
trnG-GCC	gene	translation-rna	+	36923	36994	71
trnfM-CAU	gene	translation-rna	−	37140	37214	74
rps14	gene	ribosomal-protein	−	37368	37671	303
psaB	gene	photosystem-i	−	37798	40003	2205
psaA	gene	photosystem-i	−	40028	42281	2253
ycf3	gene	other	−	42976	44907	1931
trnS-GGA	gene	translation-rna	+	45789	45876	87
rps4	gene	ribosomal-protein	−	46157	46763	606
trnT-UGU	gene	translation-rna	−	47094	47167	73
trnL-UAA	gene	translation-rna	+	47850	48415	565
trnF-GAA	gene	translation-rna	+	48726	48799	73
ndhJ	gene	nad-dehydrogenase	−	49440	49917	477
ndhK	gene	nad-dehydrogenase	−	50025	50703	678
ndhC	gene	nad-dehydrogenase	−	50755	51118	363
trnV-UAC	gene	translation-rna	−	52104	52757	653
trnM-CAU	gene	translation-rna	+	52945	53018	73
atpE	gene	atp-synthase	−	53226	53628	402
atpB	gene	atp-synthase	−	53624	55121	1497
rbcL	gene	other	+	55872	57336	1464
accD	gene	other	+	58027	59506	1479
psaI	gene	photosystem-i	+	60215	60326	111
ycf4	gene	other	+	60761	61316	555
cemA	gene	other	+	62057	62657	600
petA	gene	cytochrome	+	62863	63826	963
psbJ	gene	photosystem-ii	−	64849	64972	123
psbL	gene	photosystem-ii	−	65105	65327	222
psbF	gene	photosystem-ii	−	65245	65365	120
psbE	gene	photosystem-ii	−	65379	65631	252
petL	gene	cytochrome	+	66496	66592	96
petG	gene	cytochrome	+	66767	66881	114
trnW-CCA	gene	translation-rna	−	66999	67073	74
trnP-UGG	gene	translation-rna	−	67242	67316	74
psaJ	gene	photosystem-i	+	67524	67722	198
rpl33	gene	ribosomal-protein	+	68207	68408	201
rps18	gene	ribosomal-protein	+	68583	68889	306
rpl20	gene	ribosomal-protein	−	69127	69514	387
rps12	gene	ribosomal-protein	−	70290	98367	28077
rps12	gene	ribosomal-protein	+	70290	139068	68778
clpP	gene	other	−	70556	72488	1932
psbB	gene	photosystem-ii	+	72954	74481	1527
psbT	gene	photosystem-ii	+	74673	74775	102
psbN	gene	photosystem-ii	−	74848	74980	132
psbH	gene	photosystem-ii	+	75083	75305	222
petB	gene	cytochrome	+	75430	76798	1368
petD	gene	cytochrome	+	76986	78177	1191
rpoA	gene	rna-polymerase	−	78551	79346	795
rps11	gene	ribosomal-protein	−	79417	79834	417
rpl36	gene	ribosomal-protein	−	79935	80049	114
infA	gene	other	−	80143	80377	234
rps8	gene	ribosomal-protein	−	80500	80911	411
rpl14	gene	ribosomal-protein	−	81067	81436	369
rpl16	gene	ribosomal-protein	−	81562	82799	1237
rps3	gene	ribosomal-protein	−	82954	83617	663
rpl22	gene	ribosomal-protein	−	83618	84074	456
rps19	gene	ribosomal-protein	−	84133	84412	279
rpl2	gene	ribosomal-protein	−	84465	85947	1482
rpl23	gene	ribosomal-protein	−	85965	86247	282
trnI-CAU	gene	translation-rna	−	86406	86480	74
ycf2	gene	other	+	86568	93348	6780
ycf15	gene	other	+	93438	93687	249
trnL-CAA	gene	translation-rna	−	93946	94027	81
ndhB	gene	nad-dehydrogenase	−	94569	96781	2212
rps7	gene	ribosomal-protein	−	97055	97523	468
trnV-GAC	gene	translation-rna	+	99938	100010	72
rrn16	gene	ribosomal-rna	+	100236	101727	1491
trnI-GAU	gene	translation-rna	+	102025	103046	1021
trnA-UGC	gene	translation-rna	+	103110	103996	886
rrn23	gene	ribosomal-rna	+	104165	106977	2812
rrn4.5	gene	ribosomal-rna	+	107075	107178	103
rrn5	gene	ribosomal-rna	+	107425	107546	121
trnR-ACG	gene	translation-rna	+	107780	107854	74
trnN-GUU	gene	translation-rna	−	108405	108477	72
ndhF	gene	nad-dehydrogenase	−	109553	111794	2241
rpl32	gene	ribosomal-protein	+	112307	112484	177
trnL-UAG	gene	translation-rna	+	112931	113011	80
ccsA	gene	other	+	113100	114075	975
ndhD	gene	nad-dehydrogenase	−	114308	115811	1503
psaC	gene	photosystem-i	−	115936	116182	246
ndhE	gene	nad-dehydrogenase	−	116437	116743	306
ndhG	gene	nad-dehydrogenase	−	116964	117495	531
ndhI	gene	nad-dehydrogenase	−	117860	118361	501
ndhA	gene	nad-dehydrogenase	−	118448	120557	2109
ndhH	gene	nad-dehydrogenase	−	120558	121740	1182
rps15	gene	ribosomal-protein	−	121836	122109	273
ycf1	gene	other	−	122306	127949	5643
trnN-GUU	gene	translation-rna	+	128167	128239	72
trnR-ACG	gene	translation-rna	−	128790	128864	74
rrn5	gene	ribosomal-rna	−	129098	129219	121
rrn4.5	gene	ribosomal-rna	−	129466	129569	103
rrn23	gene	ribosomal-rna	−	129667	132479	2812
trnI-GAU	gene	translation-rna	−	133598	134619	1021
ycf68	gene	other	−	134170	134464	294
rrn16	gene	ribosomal-rna	−	134917	136408	1491
trnV-GAC	gene	translation-rna	−	136634	136706	72
rps7	gene	ribosomal-protein	+	139121	139589	468
ndhB	gene	nad-dehydrogenase	+	139863	142075	2212
trnL-CAA	gene	translation-rna	+	142617	142698	81
ycf15	gene	other	−	142957	143206	249
ycf2	gene	other	−	143296	150076	6780
trnI-CAU	gene	translation-rna	+	150164	150238	74
rpl23	gene	ribosomal-protein	+	150397	150679	282
rpl2	gene	ribosomal-protein	+	150697	152179	1482

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomePQ059306.1DNA · accDPQ059306DNA · atpBPQ059306DNA · matKPQ059306DNA · ndhFPQ059306DNA · psbAPQ059306DNA · rbcLPQ059306DNA · rps12PQ059306DNA · ycf1PQ059306