Coordinate-aware organelle record

Scutellaria heterophylla chloroplast genome

Available MW420938.1 152,365 bp 132 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

132 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	3	77	74
psbA	gene	photosystem-ii	−	379	1438	1059
trnK-UUU	gene	translation-rna	−	1682	4264	2582
matK	gene	other	−	1968	3510	1542
rps16	gene	ribosomal-protein	−	5159	6335	1176
trnQ-UUC	gene	translation-rna	−	7445	7517	72
psbK	gene	photosystem-ii	+	7842	8028	186
psbI	gene	photosystem-ii	+	8421	8532	111
trnS-GCU	gene	translation-rna	−	8651	8739	88
trnG-CGA	gene	translation-rna	+	9418	10174	756
trnR-UCU	gene	translation-rna	+	10348	10420	72
atpA	gene	atp-synthase	−	10516	12040	1524
atpF	gene	atp-synthase	−	12113	13344	1231
atpH	gene	atp-synthase	−	13707	13953	246
atpI	gene	atp-synthase	−	14935	15679	744
rps2	gene	ribosomal-protein	−	16025	16736	711
rpoC2	gene	rna-polymerase	−	16941	21144	4203
rpoC1	gene	rna-polymerase	−	21297	24129	2832
rpoB	gene	rna-polymerase	−	24155	27368	3213
trnC-GCA	gene	translation-rna	+	28528	28599	71
petN	gene	cytochrome	+	29325	29415	90
psbM	gene	photosystem-ii	−	30432	30537	105
trnD-GUC	gene	translation-rna	−	31069	31143	74
trnY-GUA	gene	translation-rna	−	31256	31340	84
trnE-UUC	gene	translation-rna	−	31399	31472	73
trnT-GGU	gene	translation-rna	+	32040	32112	72
psbD	gene	photosystem-ii	+	33416	34478	1062
psbC	gene	photosystem-ii	+	34425	35847	1422
trnS-UCA	gene	translation-rna	−	36080	36173	93
psbZ	gene	photosystem-ii	+	36480	36669	189
trnG-GCC	gene	translation-rna	+	36942	37013	71
trnfM-CAU	gene	translation-rna	−	37157	37231	74
rps14	gene	ribosomal-protein	−	37385	37688	303
psaB	gene	photosystem-i	−	37815	40020	2205
psaA	gene	photosystem-i	−	40045	42298	2253
ycf3	gene	other	−	42989	44916	1927
trnS-GGA	gene	translation-rna	+	45805	45892	87
rps4	gene	ribosomal-protein	−	46173	46779	606
trnT-UGU	gene	translation-rna	−	47111	47184	73
trnL-UAA	gene	translation-rna	+	47870	48435	565
trnF-GAA	gene	translation-rna	+	48740	48813	73
ndhJ	gene	nad-dehydrogenase	−	49455	49932	477
ndhK	gene	nad-dehydrogenase	−	50040	50718	678
ndhC	gene	nad-dehydrogenase	−	50770	51133	363
trnV-UAC	gene	translation-rna	−	52133	52786	653
trnM-CAU	gene	translation-rna	+	52974	53047	73
atpE	gene	atp-synthase	−	53255	53657	402
atpB	gene	atp-synthase	−	53653	55150	1497
rbcL	gene	other	+	55922	57365	1443
accD	gene	other	+	58056	59535	1479
psaI	gene	photosystem-i	+	60244	60355	111
ycf4	gene	other	+	60790	61345	555
cemA	gene	other	+	62001	62700	699
petA	gene	cytochrome	+	62906	63869	963
pabJ	gene	other	−	64890	65013	123
psbL	gene	photosystem-ii	−	65146	65263	117
psbF	gene	photosystem-ii	−	65286	65406	120
psbE	gene	photosystem-ii	−	65420	65672	252
petL	gene	cytochrome	+	66538	66634	96
petG	gene	cytochrome	+	66808	66922	114
trnW-CCA	gene	translation-rna	−	67040	67114	74
trnP-UGG	gene	translation-rna	−	67283	67357	74
psbJ	gene	photosystem-ii	+	67628	67763	135
rpl33	gene	ribosomal-protein	+	68222	68423	201
rps18	gene	ribosomal-protein	+	68606	68912	306
rpl20	gene	ribosomal-protein	−	69149	69536	387
rps12	gene	ribosomal-protein	−	70311	98420	28109
rps12	gene	ribosomal-protein	+	70311	139155	68844
clpP	gene	other	−	70578	72511	1933
psbB	gene	photosystem-ii	+	72977	74504	1527
psbT	gene	photosystem-ii	+	74695	74797	102
psbN	gene	photosystem-ii	−	74870	75002	132
psbH	gene	photosystem-ii	+	75105	75327	222
petB	gene	cytochrome	+	75452	76821	1369
petD	gene	cytochrome	+	77009	78200	1191
rpoA	gene	rna-polymerase	−	78362	79376	1014
rps11	gene	ribosomal-protein	−	79447	79864	417
rpl36	gene	ribosomal-protein	−	79965	80079	114
infA	gene	other	−	80173	80407	234
rps8	gene	ribosomal-protein	−	80527	80938	411
rpl14	gene	ribosomal-protein	−	81095	81464	369
rpl16	gene	ribosomal-protein	−	81590	82852	1262
rps3	gene	ribosomal-protein	−	83007	83670	663
rpl22	gene	ribosomal-protein	−	83671	84127	456
rps19	gene	ribosomal-protein	−	84186	84465	279
rpl2	gene	ribosomal-protein	−	84518	86000	1482
rpl23	gene	ribosomal-protein	−	86018	86300	282
trnI-CAU	gene	translation-rna	−	86459	86533	74
ycf2	gene	other	+	86621	93401	6780
ycf15	gene	other	+	93542	93740	198
trnL-CAA	gene	translation-rna	−	93999	94080	81
ndhB	gene	nad-dehydrogenase	−	94622	96834	2212
rps7	gene	ribosomal-protein	−	97108	97576	468
trnV-GAC	gene	translation-rna	+	99992	100064	72
rrn16	gene	ribosomal-rna	+	100290	101782	1492
trnI-GAU	gene	translation-rna	+	102080	103100	1020
trnA-UGC	gene	translation-rna	+	103165	104051	886
rrn23	gene	ribosomal-rna	+	104220	107023	2803
rrn4.5	gene	ribosomal-rna	+	107121	107224	103
rrn5	gene	ribosomal-rna	+	107471	107592	121
trnR-ACG	gene	translation-rna	+	107826	107900	74
trnN-GUU	gene	translation-rna	+	108451	108523	72
ndhF	gene	nad-dehydrogenase	−	109599	111840	2241
rpl32	gene	ribosomal-protein	+	112352	112529	177
trnL-UAG	gene	translation-rna	+	112974	113054	80
ccsA	gene	other	+	113155	114130	975
ndhD	gene	nad-dehydrogenase	−	114363	115893	1530
psaC	gene	photosystem-i	−	115991	116237	246
ndhE	gene	nad-dehydrogenase	−	116492	116798	306
ndhG	gene	nad-dehydrogenase	−	117041	117572	531
ndhI	gene	nad-dehydrogenase	−	117937	118438	501
ndhA	gene	nad-dehydrogenase	−	118525	120635	2110
ndhH	gene	nad-dehydrogenase	−	120636	121818	1182
rps15	gene	ribosomal-protein	−	121914	122187	273
ycf1	gene	other	−	122400	127932	5532
trnN-GUU	gene	translation-rna	+	128261	128333	72
trnR-ACG	gene	translation-rna	−	128884	128958	74
rrn5	gene	ribosomal-rna	−	129192	129313	121
rrn4.5	gene	ribosomal-rna	−	129560	129663	103
rrn23	gene	ribosomal-rna	−	129761	132564	2803
trnA-UGC	gene	translation-rna	−	132733	133619	886
trnI-GAU	gene	translation-rna	−	133684	134704	1020
rrn16	gene	ribosomal-rna	−	135002	136494	1492
trnV-GAC	gene	translation-rna	−	136720	136792	72
rps7	gene	ribosomal-protein	+	139208	139676	468
ndhB	gene	nad-dehydrogenase	+	139950	142162	2212
trnL-CAA	gene	translation-rna	+	142704	142785	81
ycf15	gene	other	−	143044	143242	198
ycf2	gene	other	−	143383	150163	6780
trnI-CAU	gene	translation-rna	+	150251	150325	74
rpl23	gene	ribosomal-protein	+	150484	150766	282
rpl2	gene	ribosomal-protein	+	150784	152266	1482

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomeMW420938.1DNA · accDMW420938DNA · atpBMW420938DNA · matKMW420938DNA · ndhFMW420938DNA · psbAMW420938DNA · rbcLMW420938DNA · rps12MW420938DNA · ycf1MW420938