Coordinate-aware organelle record

Scutellaria hissarica chloroplast genome

Available MW420942.1 152,042 bp 132 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

132 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	2	76	74
psbA	gene	photosystem-ii	−	376	1435	1059
trnK-UUU	gene	translation-rna	−	1679	4265	2586
matK	gene	other	−	1964	3509	1545
rps16	gene	ribosomal-protein	−	5177	6347	1170
trnQ-UUC	gene	translation-rna	−	7458	7530	72
psbK	gene	photosystem-ii	+	7854	8040	186
psbI	gene	photosystem-ii	+	8430	8541	111
trnS-GCU	gene	translation-rna	−	8647	8735	88
trnG-CGA	gene	translation-rna	+	9427	10181	754
trnR-UCU	gene	translation-rna	+	10347	10419	72
atpA	gene	atp-synthase	−	10515	12039	1524
atpF	gene	atp-synthase	−	12121	13351	1230
atpH	gene	atp-synthase	−	13723	13969	246
atpI	gene	atp-synthase	−	14963	15707	744
rps2	gene	ribosomal-protein	−	16054	16765	711
rpoC2	gene	rna-polymerase	−	16981	21181	4200
rpoC1	gene	rna-polymerase	−	21335	24163	2828
rpoB	gene	rna-polymerase	−	24189	27402	3213
trnC-GCA	gene	translation-rna	+	28569	28640	71
petN	gene	cytochrome	+	29369	29459	90
psbM	gene	photosystem-ii	−	30439	30553	114
trnD-GUC	gene	translation-rna	−	31084	31158	74
trnY-GUA	gene	translation-rna	−	31271	31355	84
trnE-UUC	gene	translation-rna	−	31414	31487	73
trnT-GGU	gene	translation-rna	+	32058	32130	72
psbD	gene	photosystem-ii	+	33444	34506	1062
psbC	gene	photosystem-ii	+	34453	35875	1422
trnS-UCA	gene	translation-rna	−	36110	36203	93
psbZ	gene	photosystem-ii	+	36522	36711	189
trnG-GCC	gene	translation-rna	+	36982	37053	71
trnfM-CAU	gene	translation-rna	−	37197	37271	74
rps14	gene	ribosomal-protein	−	37420	37723	303
psaB	gene	photosystem-i	−	37850	40055	2205
psaA	gene	photosystem-i	−	40080	42333	2253
ycf3	gene	other	−	43032	44959	1927
trnS-GGA	gene	translation-rna	+	45840	45927	87
rps4	gene	ribosomal-protein	−	46210	46816	606
trnT-UGU	gene	translation-rna	−	47155	47228	73
trnL-UAA	gene	translation-rna	+	47919	48487	568
trnF-GAA	gene	translation-rna	+	48791	48864	73
ndhJ	gene	nad-dehydrogenase	−	49514	49991	477
ndhK	gene	nad-dehydrogenase	−	50099	50777	678
ndhC	gene	nad-dehydrogenase	−	50829	51192	363
trnV-UAC	gene	translation-rna	−	52180	52839	659
trnM-CAU	gene	translation-rna	+	53019	53092	73
atpE	gene	atp-synthase	−	53300	53702	402
atpB	gene	atp-synthase	−	53698	55195	1497
rbcL	gene	other	+	55975	57418	1443
accD	gene	other	+	58150	59641	1491
psaI	gene	photosystem-i	+	59878	59989	111
ycf4	gene	other	+	60422	60977	555
cemA	gene	other	+	61543	62203	660
petA	gene	cytochrome	+	62409	63372	963
pabJ	gene	other	−	64399	64522	123
psbL	gene	photosystem-ii	−	64656	64773	117
psbF	gene	photosystem-ii	−	64796	64916	120
psbE	gene	photosystem-ii	−	64930	65182	252
petL	gene	cytochrome	+	66093	66189	96
petG	gene	cytochrome	+	66364	66478	114
trnW-CCA	gene	translation-rna	−	66586	66660	74
trnP-UGG	gene	translation-rna	−	66830	66904	74
psbJ	gene	photosystem-ii	+	67176	67311	135
rpl33	gene	ribosomal-protein	+	67785	67986	201
rps18	gene	ribosomal-protein	+	68160	68466	306
rpl20	gene	ribosomal-protein	−	68706	69093	387
rps12	gene	ribosomal-protein	−	69875	97998	28123
rps12	gene	ribosomal-protein	+	69875	138797	68922
clpP	gene	other	−	70142	72074	1932
psbB	gene	photosystem-ii	+	72541	74068	1527
psbT	gene	photosystem-ii	+	74247	74355	108
psbN	gene	photosystem-ii	−	74415	74547	132
psbH	gene	photosystem-ii	+	74650	74872	222
petB	gene	cytochrome	+	74996	76365	1369
petD	gene	cytochrome	+	76553	77765	1212
rpoA	gene	rna-polymerase	−	77927	78944	1017
rps11	gene	ribosomal-protein	−	79015	79432	417
rpl36	gene	ribosomal-protein	−	79533	79647	114
infA	gene	other	−	79742	79976	234
rps8	gene	ribosomal-protein	−	80098	80509	411
rpl14	gene	ribosomal-protein	−	80669	81038	369
rpl16	gene	ribosomal-protein	−	81164	82391	1227
rps3	gene	ribosomal-protein	−	82545	83208	663
rpl22	gene	ribosomal-protein	−	83209	83665	456
rps19	gene	ribosomal-protein	−	83724	84003	279
rpl2	gene	ribosomal-protein	−	84058	85541	1483
rpl23	gene	ribosomal-protein	−	85559	85841	282
trnI-CAU	gene	translation-rna	−	86000	86074	74
ycf2	gene	other	+	86162	92978	6816
ycf15	gene	other	+	93119	93317	198
trnL-CAA	gene	translation-rna	−	93577	93658	81
ndhB	gene	nad-dehydrogenase	−	94200	96412	2212
rps7	gene	ribosomal-protein	−	96686	97154	468
trnV-GAC	gene	translation-rna	+	99570	99642	72
rrn16	gene	ribosomal-rna	+	99864	101355	1491
trnI-GAU	gene	translation-rna	+	101653	102673	1020
trnA-UGC	gene	translation-rna	+	102738	103625	887
rrn23	gene	ribosomal-rna	+	103794	106606	2812
rrn4.5	gene	ribosomal-rna	+	106704	106807	103
rrn5	gene	ribosomal-rna	+	107054	107175	121
trnR-ACG	gene	translation-rna	+	107409	107483	74
trnN-GUU	gene	translation-rna	+	108038	108110	72
ndhF	gene	nad-dehydrogenase	−	109186	111427	2241
rpl32	gene	ribosomal-protein	+	111948	112125	177
trnL-UAG	gene	translation-rna	+	112559	112639	80
ccsA	gene	other	+	112740	113715	975
ndhD	gene	nad-dehydrogenase	−	113953	115483	1530
psaC	gene	photosystem-i	−	115592	115838	246
ndhE	gene	nad-dehydrogenase	−	116093	116399	306
ndhG	gene	nad-dehydrogenase	−	116623	117154	531
ndhI	gene	nad-dehydrogenase	−	117502	118003	501
ndhA	gene	nad-dehydrogenase	−	118083	120193	2110
ndhH	gene	nad-dehydrogenase	−	120194	121376	1182
rps15	gene	ribosomal-protein	−	121472	121745	273
ycf1	gene	other	−	122015	127565	5550
trnN-GUU	gene	translation-rna	+	127894	127966	72
trnR-ACG	gene	translation-rna	−	128521	128595	74
rrn5	gene	ribosomal-rna	−	128829	128950	121
rrn4.5	gene	ribosomal-rna	−	129197	129300	103
rrn23	gene	ribosomal-rna	−	129398	132210	2812
trnA-UGC	gene	translation-rna	−	132379	133266	887
trnI-GAU	gene	translation-rna	−	133331	134351	1020
rrn16	gene	ribosomal-rna	−	134649	136140	1491
trnV-GAC	gene	translation-rna	−	136362	136434	72
rps7	gene	ribosomal-protein	+	138850	139318	468
ndhB	gene	nad-dehydrogenase	+	139592	141804	2212
trnL-CAA	gene	translation-rna	+	142346	142427	81
ycf15	gene	other	−	142687	142885	198
ycf2	gene	other	−	143026	149842	6816
trnI-CAU	gene	translation-rna	+	149930	150004	74
rpl23	gene	ribosomal-protein	+	150163	150445	282
rpl2	gene	ribosomal-protein	+	150463	151946	1483

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomeMW420942.1DNA · accDMW420942DNA · atpBMW420942DNA · matKMW420942DNA · ndhFMW420942DNA · psbAMW420942DNA · rbcLMW420942DNA · rps12MW420942DNA · ycf1MW420942