Coordinate-aware organelle record

Scutellaria humilis chloroplast genome

Available PQ058251.1 152,406 bp 133 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

133 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	1	75	74
psbA	gene	photosystem-ii	−	381	1440	1059
trnK-UUU	gene	translation-rna	−	1680	4274	2594
matK	gene	other	−	1975	3511	1536
rps16	gene	ribosomal-protein	−	5175	6347	1172
trnQ-UUG	gene	translation-rna	−	7466	7538	72
psbK	gene	photosystem-ii	+	7862	8048	186
psbI	gene	photosystem-ii	+	8435	8546	111
trnS-GCU	gene	translation-rna	−	8664	8752	88
trnG-UCC	gene	translation-rna	+	9434	10194	760
trnR-UCU	gene	translation-rna	+	10368	10440	72
atpA	gene	atp-synthase	−	10536	12060	1524
atpF	gene	atp-synthase	−	12142	13369	1227
atpH	gene	atp-synthase	−	13730	13976	246
atpI	gene	atp-synthase	−	14964	15708	744
rps2	gene	ribosomal-protein	−	16055	16766	711
rpoC2	gene	rna-polymerase	−	16983	21189	4206
rpoC1	gene	rna-polymerase	−	21343	24181	2838
rpoB	gene	rna-polymerase	−	24207	27420	3213
trnC-GCA	gene	translation-rna	+	28580	28651	71
petN	gene	cytochrome	+	29370	29460	90
psbM	gene	photosystem-ii	−	30484	30589	105
trnD-GUC	gene	translation-rna	−	31110	31184	74
trnY-GUA	gene	translation-rna	−	31297	31381	84
trnE-UUC	gene	translation-rna	−	31440	31513	73
trnT-GGU	gene	translation-rna	+	32095	32167	72
psbD	gene	photosystem-ii	+	33476	34538	1062
psbC	gene	photosystem-ii	+	34485	35907	1422
trnS-UGA	gene	translation-rna	−	36149	36241	92
psbZ	gene	photosystem-ii	+	36560	36749	189
trnG-GCC	gene	translation-rna	+	37020	37091	71
trnfM-CAU	gene	translation-rna	−	37234	37308	74
rps14	gene	ribosomal-protein	−	37457	37760	303
psaB	gene	photosystem-i	−	37887	40092	2205
psaA	gene	photosystem-i	−	40117	42370	2253
ycf3	gene	other	−	43037	44961	1924
trnS-GGA	gene	translation-rna	+	45845	45932	87
rps4	gene	ribosomal-protein	−	46217	46823	606
trnT-UGU	gene	translation-rna	−	47163	47236	73
trnL-UAA	gene	translation-rna	+	47903	48471	568
trnF-GAA	gene	translation-rna	+	48776	48849	73
ndhJ	gene	nad-dehydrogenase	−	49498	49975	477
ndhK	gene	nad-dehydrogenase	−	50082	50760	678
ndhC	gene	nad-dehydrogenase	−	50812	51175	363
trnV-UAC	gene	translation-rna	−	52163	52816	653
trnM-CAU	gene	translation-rna	+	52996	53069	73
atpE	gene	atp-synthase	−	53278	53680	402
atpB	gene	atp-synthase	−	53676	55164	1488
rbcL	gene	other	+	55907	57371	1464
accD	gene	other	+	58100	59567	1467
psaI	gene	photosystem-i	+	60268	60379	111
ycf4	gene	other	+	60818	61373	555
cemA	gene	other	+	62114	62714	600
petA	gene	cytochrome	+	62920	63883	963
psbJ	gene	photosystem-ii	−	64898	65021	123
psbL	gene	photosystem-ii	−	65158	65380	222
psbF	gene	photosystem-ii	−	65298	65418	120
psbE	gene	photosystem-ii	−	65432	65684	252
petL	gene	cytochrome	+	66592	66688	96
petG	gene	cytochrome	+	66866	66980	114
trnW-CCA	gene	translation-rna	−	67098	67172	74
trnP-UGG	gene	translation-rna	−	67341	67415	74
psaJ	gene	photosystem-i	+	67687	67822	135
rpl33	gene	ribosomal-protein	+	68285	68486	201
rps18	gene	ribosomal-protein	+	68660	68966	306
rpl20	gene	ribosomal-protein	−	69218	69605	387
rps12	gene	ribosomal-protein	−	70402	98525	28123
rps12	gene	ribosomal-protein	+	70402	139171	68769
clpP	gene	other	−	70658	72593	1935
psbB	gene	photosystem-ii	+	73066	74593	1527
psbT	gene	photosystem-ii	+	74784	74886	102
psbN	gene	photosystem-ii	−	74960	75092	132
psbH	gene	photosystem-ii	+	75195	75417	222
petB	gene	cytochrome	+	75541	76907	1366
petD	gene	cytochrome	+	77095	78297	1202
rpoA	gene	rna-polymerase	−	78459	79473	1014
rps11	gene	ribosomal-protein	−	79544	79961	417
rpl36	gene	ribosomal-protein	−	80062	80176	114
infA	gene	other	−	80271	80505	234
rps8	gene	ribosomal-protein	−	80624	81035	411
rpl14	gene	ribosomal-protein	−	81195	81564	369
rpl16	gene	ribosomal-protein	−	81690	82921	1231
rps3	gene	ribosomal-protein	−	83076	83739	663
rpl22	gene	ribosomal-protein	−	83740	84196	456
rps19	gene	ribosomal-protein	−	84262	84541	279
rpl2	gene	ribosomal-protein	−	84595	86078	1483
rpl23	gene	ribosomal-protein	−	86096	86378	282
trnI-CAU	gene	translation-rna	−	86537	86611	74
ycf2	gene	other	+	86699	93509	6810
ycf15	gene	other	+	93650	93848	198
trnL-CAA	gene	translation-rna	−	94103	94184	81
ndhB	gene	nad-dehydrogenase	−	94727	96939	2212
rps7	gene	ribosomal-protein	−	97213	97681	468
trnV-GAC	gene	translation-rna	+	100102	100174	72
rrn16	gene	ribosomal-rna	+	100401	101892	1491
trnI-GAU	gene	translation-rna	+	102190	103211	1021
trnA-UGC	gene	translation-rna	+	103275	104157	882
rrn23	gene	ribosomal-rna	+	104319	107132	2813
rrn4.5	gene	ribosomal-rna	+	107230	107333	103
rrn5	gene	ribosomal-rna	+	107580	107701	121
trnR-ACG	gene	translation-rna	+	107935	108009	74
trnN-GUU	gene	translation-rna	−	108555	108627	72
ndhF	gene	nad-dehydrogenase	−	109703	111944	2241
rpl32	gene	ribosomal-protein	+	112458	112635	177
trnL-UAG	gene	translation-rna	+	113067	113147	80
ccsA	gene	other	+	113241	114216	975
ndhD	gene	nad-dehydrogenase	−	114448	115951	1503
psaC	gene	photosystem-i	−	116070	116316	246
ndhE	gene	nad-dehydrogenase	−	116572	116878	306
ndhG	gene	nad-dehydrogenase	−	117108	117639	531
ndhI	gene	nad-dehydrogenase	−	118004	118505	501
ndhA	gene	nad-dehydrogenase	−	118585	120675	2090
ndhH	gene	nad-dehydrogenase	−	120676	121888	1212
rps15	gene	ribosomal-protein	−	121960	122233	273
ycf1	gene	other	−	122504	128060	5556
trnN-GUU	gene	translation-rna	+	128278	128350	72
trnR-ACG	gene	translation-rna	−	128896	128970	74
rrn5	gene	ribosomal-rna	−	129204	129325	121
rrn4.5	gene	ribosomal-rna	−	129572	129675	103
rrn23	gene	ribosomal-rna	−	129773	132586	2813
trnA-UGC	gene	translation-rna	−	132748	133630	882
trnI-GAU	gene	translation-rna	−	133694	134715	1021
ycf68	gene	other	−	134320	134560	240
rrn16	gene	ribosomal-rna	−	135013	136504	1491
trnV-GAC	gene	translation-rna	−	136731	136803	72
rps7	gene	ribosomal-protein	+	139224	139692	468
ndhB	gene	nad-dehydrogenase	+	139966	142178	2212
trnL-CAA	gene	translation-rna	+	142721	142802	81
ycf15	gene	other	−	143057	143255	198
ycf2	gene	other	−	143396	150206	6810
trnI-CAU	gene	translation-rna	+	150294	150368	74
rpl23	gene	ribosomal-protein	+	150527	150809	282
rpl2	gene	ribosomal-protein	+	150827	152310	1483

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomePQ058251.1DNA · accDPQ058251DNA · atpBPQ058251DNA · matKPQ058251DNA · ndhFPQ058251DNA · psbAPQ058251DNA · rbcLPQ058251DNA · rps12PQ058251DNA · ycf1PQ058251