Coordinate-aware organelle record

Scutellaria incana chloroplast genome

Available MW420975.1 151,634 bp 132 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

132 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	1	75	74
psbA	gene	photosystem-ii	−	378	1437	1059
trnK-UUU	gene	translation-rna	−	1667	4254	2587
matK	gene	other	−	1964	3500	1536
rps16	gene	ribosomal-protein	−	5160	6326	1166
trnQ-UUC	gene	translation-rna	−	7418	7490	72
psbK	gene	photosystem-ii	+	7822	8008	186
psbI	gene	photosystem-ii	+	8390	8501	111
trnS-GCU	gene	translation-rna	−	8610	8698	88
trnG-CGA	gene	translation-rna	+	9371	10133	762
trnR-UCU	gene	translation-rna	+	10307	10379	72
atpA	gene	atp-synthase	−	10481	12005	1524
atpF	gene	atp-synthase	−	12077	13311	1234
atpH	gene	atp-synthase	−	13673	13919	246
atpI	gene	atp-synthase	−	14908	15652	744
rps2	gene	ribosomal-protein	−	15991	16702	711
rpoC2	gene	rna-polymerase	−	16931	21125	4194
rpoC1	gene	rna-polymerase	−	21279	24088	2809
rpoB	gene	rna-polymerase	−	24114	27327	3213
trnC-GCA	gene	translation-rna	+	28483	28554	71
petN	gene	cytochrome	+	29265	29355	90
psbM	gene	photosystem-ii	−	30355	30460	105
trnD-GUC	gene	translation-rna	−	30989	31063	74
trnY-GUA	gene	translation-rna	−	31182	31266	84
trnE-UUC	gene	translation-rna	−	31325	31398	73
trnT-GGU	gene	translation-rna	+	31981	32053	72
psbD	gene	photosystem-ii	+	33344	34406	1062
psbC	gene	photosystem-ii	+	34353	35775	1422
trnS-UCA	gene	translation-rna	−	36013	36106	93
psbZ	gene	photosystem-ii	+	36425	36614	189
trnG-GCC	gene	translation-rna	+	36889	36960	71
trnfM-CAU	gene	translation-rna	−	37113	37187	74
rps14	gene	ribosomal-protein	−	37336	37639	303
psaB	gene	photosystem-i	−	37766	39971	2205
psaA	gene	photosystem-i	−	39995	42248	2253
ycf3	gene	other	−	42943	44855	1912
trnS-GGA	gene	translation-rna	+	45195	45282	87
rps4	gene	ribosomal-protein	−	45565	46171	606
trnT-UGU	gene	translation-rna	−	46510	46583	73
trnL-UAA	gene	translation-rna	+	47215	47780	565
trnF-GAA	gene	translation-rna	+	48084	48157	73
ndhJ	gene	nad-dehydrogenase	−	48808	49285	477
ndhK	gene	nad-dehydrogenase	−	49392	50070	678
ndhC	gene	nad-dehydrogenase	−	50122	50485	363
trnV-UAC	gene	translation-rna	−	51480	52133	653
trnM-CAU	gene	translation-rna	+	52313	52386	73
atpE	gene	atp-synthase	−	52596	52998	402
atpB	gene	atp-synthase	−	52994	54491	1497
rbcL	gene	other	+	55257	56700	1443
accD	gene	other	+	57411	58890	1479
psaI	gene	photosystem-i	+	59584	59695	111
ycf4	gene	other	+	60121	60676	555
cemA	gene	other	+	61356	62016	660
petA	gene	cytochrome	+	62222	63185	963
pabJ	gene	other	−	64227	64350	123
psbL	gene	photosystem-ii	−	64484	64601	117
psbF	gene	photosystem-ii	−	64624	64744	120
psbE	gene	photosystem-ii	−	64758	65010	252
petL	gene	cytochrome	+	65917	66013	96
petG	gene	cytochrome	+	66188	66302	114
trnW-CCA	gene	translation-rna	−	66420	66494	74
trnP-UGG	gene	translation-rna	−	66657	66731	74
psbJ	gene	photosystem-ii	+	66999	67134	135
rpl33	gene	ribosomal-protein	+	67605	67806	201
rps18	gene	ribosomal-protein	+	67979	68285	306
rpl20	gene	ribosomal-protein	−	68520	68907	387
rps12	gene	ribosomal-protein	−	69690	97781	28091
rps12	gene	ribosomal-protein	+	69690	138414	68724
clpP	gene	other	−	69957	71886	1929
psbB	gene	photosystem-ii	+	72337	73864	1527
psbT	gene	photosystem-ii	+	74056	74158	102
psbN	gene	photosystem-ii	−	74231	74363	132
psbH	gene	photosystem-ii	+	74466	74688	222
petB	gene	cytochrome	+	74812	76183	1371
petD	gene	cytochrome	+	76371	77577	1206
rpoA	gene	rna-polymerase	−	77761	78754	993
rps11	gene	ribosomal-protein	−	78825	79242	417
rpl36	gene	ribosomal-protein	−	79343	79457	114
infA	gene	other	−	79552	79786	234
rps8	gene	ribosomal-protein	−	79906	80317	411
rpl14	gene	ribosomal-protein	−	80475	80844	369
rpl16	gene	ribosomal-protein	−	80970	82195	1225
rps3	gene	ribosomal-protein	−	82349	83012	663
rpl22	gene	ribosomal-protein	−	83013	83469	456
rps19	gene	ribosomal-protein	−	83533	83812	279
rpl2	gene	ribosomal-protein	−	83868	85351	1483
rpl23	gene	ribosomal-protein	−	85369	85651	282
trnI-CAU	gene	translation-rna	−	85810	85884	74
ycf2	gene	other	+	85972	92770	6798
ycf15	gene	other	+	92959	93109	150
trnL-CAA	gene	translation-rna	−	93369	93450	81
ndhB	gene	nad-dehydrogenase	−	93992	96195	2203
rps7	gene	ribosomal-protein	−	96469	96937	468
trnV-GAC	gene	translation-rna	+	99350	99422	72
rrn16	gene	ribosomal-rna	+	99649	101140	1491
trnI-GAU	gene	translation-rna	+	101438	102458	1020
trnA-UGC	gene	translation-rna	+	102523	103412	889
rrn23	gene	ribosomal-rna	+	103574	106387	2813
rrn4.5	gene	ribosomal-rna	+	106485	106588	103
rrn5	gene	ribosomal-rna	+	106835	106956	121
trnR-ACG	gene	translation-rna	+	107180	107254	74
trnN-GUU	gene	translation-rna	+	107801	107873	72
ndhF	gene	nad-dehydrogenase	−	108949	111190	2241
rpl32	gene	ribosomal-protein	+	111711	111888	177
trnL-UAG	gene	translation-rna	+	112323	112403	80
ccsA	gene	other	+	112496	113471	975
ndhD	gene	nad-dehydrogenase	−	113705	115226	1521
psaC	gene	photosystem-i	−	115334	115580	246
ndhE	gene	nad-dehydrogenase	−	115831	116137	306
ndhG	gene	nad-dehydrogenase	−	116367	116898	531
ndhI	gene	nad-dehydrogenase	−	117262	117763	501
ndhA	gene	nad-dehydrogenase	−	117843	119941	2098
ndhH	gene	nad-dehydrogenase	−	119942	121124	1182
rps15	gene	ribosomal-protein	−	121220	121493	273
ycf1	gene	other	−	121766	127202	5436
trnN-GUU	gene	translation-rna	+	127531	127603	72
trnR-ACG	gene	translation-rna	−	128150	128224	74
rrn5	gene	ribosomal-rna	−	128448	128569	121
rrn4.5	gene	ribosomal-rna	−	128816	128919	103
rrn23	gene	ribosomal-rna	−	129017	131830	2813
trnA-UGC	gene	translation-rna	−	131992	132881	889
trnI-GAU	gene	translation-rna	−	132946	133966	1020
rrn16	gene	ribosomal-rna	−	134264	135755	1491
trnV-GAC	gene	translation-rna	−	135982	136054	72
rps7	gene	ribosomal-protein	+	138467	138935	468
ndhB	gene	nad-dehydrogenase	+	139209	141412	2203
trnL-CAA	gene	translation-rna	+	141954	142035	81
ycf15	gene	other	−	142295	142445	150
ycf2	gene	other	−	142634	149432	6798
trnI-CAU	gene	translation-rna	+	149520	149594	74
rpl23	gene	ribosomal-protein	+	149753	150035	282
rpl2	gene	ribosomal-protein	+	150053	151536	1483

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomeMW420975.1DNA · accDMW420975DNA · atpBMW420975DNA · matKMW420975DNA · ndhFMW420975DNA · psbAMW420975DNA · rbcLMW420975DNA · rps12MW420975DNA · ycf1MW420975