Coordinate-aware organelle record

Scutellaria indica var. parvifolia chloroplast genome

Available PQ059312.1 151,888 bp 133 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

133 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	2	76	74
psbA	gene	photosystem-ii	−	374	1433	1059
trnK-UUU	gene	translation-rna	−	1674	4254	2580
matK	gene	other	−	1969	3496	1527
rps16	gene	ribosomal-protein	−	5126	6296	1170
trnQ-UUG	gene	translation-rna	−	7325	7397	72
psbK	gene	photosystem-ii	+	7725	7911	186
psbI	gene	photosystem-ii	+	8303	8414	111
trnS-GCU	gene	translation-rna	−	8524	8612	88
trnG-UCC	gene	translation-rna	+	9296	10057	761
trnR-UCU	gene	translation-rna	+	10227	10299	72
atpA	gene	atp-synthase	−	10395	11919	1524
atpF	gene	atp-synthase	−	12001	13236	1235
atpH	gene	atp-synthase	−	13592	13838	246
atpI	gene	atp-synthase	−	14833	15577	744
rps2	gene	ribosomal-protein	−	15925	16762	837
rpoC2	gene	rna-polymerase	−	16852	21058	4206
rpoC1	gene	rna-polymerase	−	21212	24042	2830
rpoB	gene	rna-polymerase	−	24068	27281	3213
trnC-GCA	gene	translation-rna	+	28439	28510	71
petN	gene	cytochrome	+	29221	29311	90
psbM	gene	photosystem-ii	−	30283	30388	105
trnD-GUC	gene	translation-rna	−	30909	30983	74
trnY-GUA	gene	translation-rna	−	31096	31180	84
trnE-UUC	gene	translation-rna	−	31239	31312	73
trnT-GGU	gene	translation-rna	+	31784	31856	72
psbD	gene	photosystem-ii	+	33163	34225	1062
psbC	gene	photosystem-ii	+	34172	35594	1422
trnS-UGA	gene	translation-rna	−	35829	35921	92
psbZ	gene	photosystem-ii	+	36240	36429	189
trnG-GCC	gene	translation-rna	+	36700	36771	71
trnfM-CAU	gene	translation-rna	−	36925	36999	74
rps14	gene	ribosomal-protein	−	37148	37451	303
psaB	gene	photosystem-i	−	37578	39783	2205
psaA	gene	photosystem-i	−	39808	42061	2253
ycf3	gene	other	−	42736	44658	1922
trnS-GGA	gene	translation-rna	+	45544	45631	87
rps4	gene	ribosomal-protein	−	45916	46522	606
trnT-UGU	gene	translation-rna	−	46863	46936	73
trnL-UAA	gene	translation-rna	+	47620	48181	561
trnF-GAA	gene	translation-rna	+	48487	48560	73
ndhJ	gene	nad-dehydrogenase	−	49208	49685	477
ndhK	gene	nad-dehydrogenase	−	49784	50462	678
ndhC	gene	nad-dehydrogenase	−	50514	50877	363
trnV-UAC	gene	translation-rna	−	51724	52377	653
trnM-CAU	gene	translation-rna	+	52557	52630	73
atpE	gene	atp-synthase	−	52845	53247	402
atpB	gene	atp-synthase	−	53243	54731	1488
rbcL	gene	other	+	55482	56946	1464
accD	gene	other	+	57672	59139	1467
psaI	gene	photosystem-i	+	59697	59808	111
ycf4	gene	other	+	60233	60788	555
cemA	gene	other	+	61525	62125	600
petA	gene	cytochrome	+	62331	63294	963
psbJ	gene	photosystem-ii	−	64327	64450	123
psbL	gene	photosystem-ii	−	64583	64700	117
psbF	gene	photosystem-ii	−	64723	64843	120
psbE	gene	photosystem-ii	−	64857	65109	252
petL	gene	cytochrome	+	66017	66113	96
petG	gene	cytochrome	+	66288	66402	114
trnW-CCA	gene	translation-rna	−	66520	66594	74
trnP-UGG	gene	translation-rna	−	66763	66837	74
psaJ	gene	photosystem-i	+	67109	67244	135
rpl33	gene	ribosomal-protein	+	67717	67918	201
rps18	gene	ribosomal-protein	+	68092	68398	306
rpl20	gene	ribosomal-protein	−	68634	69021	387
rps12	gene	ribosomal-protein	−	69820	97927	28107
rps12	gene	ribosomal-protein	+	69820	138655	68835
clpP	gene	other	−	70076	72009	1933
psbB	gene	photosystem-ii	+	72475	74002	1527
psbT	gene	photosystem-ii	+	74193	74295	102
psbN	gene	photosystem-ii	−	74368	74500	132
psbH	gene	photosystem-ii	+	74603	74825	222
petB	gene	cytochrome	+	74949	76317	1368
petD	gene	cytochrome	+	76505	77707	1202
rpoA	gene	rna-polymerase	−	77869	78883	1014
rps11	gene	ribosomal-protein	−	78954	79371	417
rpl36	gene	ribosomal-protein	−	79472	79586	114
infA	gene	other	−	79681	79915	234
rps8	gene	ribosomal-protein	−	80035	80446	411
rpl14	gene	ribosomal-protein	−	80614	80983	369
rpl16	gene	ribosomal-protein	−	81109	82332	1223
rps3	gene	ribosomal-protein	−	82486	83149	663
rpl22	gene	ribosomal-protein	−	83150	83606	456
rps19	gene	ribosomal-protein	−	83665	83944	279
rpl2	gene	ribosomal-protein	−	83998	85481	1483
rpl23	gene	ribosomal-protein	−	85499	85781	282
trnI-CAU	gene	translation-rna	−	85940	86014	74
ycf2	gene	other	+	86102	92912	6810
ycf15	gene	other	+	93002	93251	249
trnL-CAA	gene	translation-rna	−	93506	93587	81
ndhB	gene	nad-dehydrogenase	−	94129	96341	2212
rps7	gene	ribosomal-protein	−	96615	97083	468
trnV-GAC	gene	translation-rna	+	99496	99568	72
rrn16	gene	ribosomal-rna	+	99795	101286	1491
trnI-GAU	gene	translation-rna	+	101584	102605	1021
trnA-UGC	gene	translation-rna	+	102669	103552	883
rrn23	gene	ribosomal-rna	+	103721	106534	2813
rrn4.5	gene	ribosomal-rna	+	106632	106735	103
rrn5	gene	ribosomal-rna	+	106982	107103	121
trnR-ACG	gene	translation-rna	+	107337	107411	74
trnN-GUU	gene	translation-rna	−	107957	108029	72
ndhF	gene	nad-dehydrogenase	−	109105	111346	2241
rpl32	gene	ribosomal-protein	+	111866	112043	177
trnL-UAG	gene	translation-rna	+	112487	112567	80
ccsA	gene	other	+	112663	113638	975
ndhD	gene	nad-dehydrogenase	−	113864	115388	1524
psaC	gene	photosystem-i	−	115486	115732	246
ndhE	gene	nad-dehydrogenase	−	115988	116294	306
ndhG	gene	nad-dehydrogenase	−	116514	117045	531
ndhI	gene	nad-dehydrogenase	−	117409	117910	501
ndhA	gene	nad-dehydrogenase	−	117990	120083	2093
ndhH	gene	nad-dehydrogenase	−	120084	121296	1212
rps15	gene	ribosomal-protein	−	121368	121641	273
ycf1	gene	other	−	121907	127544	5637
trnN-GUU	gene	translation-rna	+	127762	127834	72
trnR-ACG	gene	translation-rna	−	128380	128454	74
rrn5	gene	ribosomal-rna	−	128688	128809	121
rrn4.5	gene	ribosomal-rna	−	129056	129159	103
rrn23	gene	ribosomal-rna	−	129257	132070	2813
trnA-UGC	gene	translation-rna	−	132239	133122	883
trnI-GAU	gene	translation-rna	−	133186	134207	1021
ycf68	gene	other	−	133812	134052	240
rrn16	gene	ribosomal-rna	−	134505	135996	1491
trnV-GAC	gene	translation-rna	−	136223	136295	72
rps7	gene	ribosomal-protein	+	138708	139176	468
ndhB	gene	nad-dehydrogenase	+	139450	141662	2212
trnL-CAA	gene	translation-rna	+	142204	142285	81
ycf15	gene	other	−	142540	142789	249
ycf2	gene	other	−	142879	149689	6810
trnI-CAU	gene	translation-rna	+	149777	149851	74
rpl23	gene	ribosomal-protein	+	150010	150292	282
rpl2	gene	ribosomal-protein	+	150310	151793	1483

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomePQ059312.1DNA · accDPQ059312DNA · atpBPQ059312DNA · matKPQ059312DNA · ndhFPQ059312DNA · psbAPQ059312DNA · rbcLPQ059312DNA · rps12PQ059312DNA · ycf1PQ059312