Coordinate-aware organelle record

Scutellaria indica var. subacaulis chloroplast genome

Available PQ059311.1 152,025 bp 133 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

133 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	2	76	74
psbA	gene	photosystem-ii	−	364	1423	1059
trnK-UUU	gene	translation-rna	−	1656	4245	2589
matK	gene	other	−	1951	3487	1536
rps16	gene	ribosomal-protein	−	5118	6291	1173
trnQ-UUG	gene	translation-rna	−	7329	7401	72
psbK	gene	photosystem-ii	+	7725	7911	186
psbI	gene	photosystem-ii	+	8302	8413	111
trnS-GCU	gene	translation-rna	−	8531	8619	88
trnG-UCC	gene	translation-rna	+	9298	10059	761
trnR-UCU	gene	translation-rna	+	10229	10301	72
atpA	gene	atp-synthase	−	10397	11921	1524
atpF	gene	atp-synthase	−	12003	13231	1228
atpH	gene	atp-synthase	−	13587	13833	246
atpI	gene	atp-synthase	−	14828	15572	744
rps2	gene	ribosomal-protein	−	15920	16631	711
rpoC2	gene	rna-polymerase	−	16847	21053	4206
rpoC1	gene	rna-polymerase	−	21207	24036	2829
rpoB	gene	rna-polymerase	−	24062	27275	3213
trnC-GCA	gene	translation-rna	+	28444	28515	71
petN	gene	cytochrome	+	29227	29317	90
psbM	gene	photosystem-ii	−	30309	30414	105
trnD-GUC	gene	translation-rna	−	30940	31014	74
trnY-GUA	gene	translation-rna	−	31127	31211	84
trnE-UUC	gene	translation-rna	−	31270	31343	73
trnT-GGU	gene	translation-rna	+	31918	31990	72
psbD	gene	photosystem-ii	+	33296	34358	1062
psbC	gene	photosystem-ii	+	34305	35727	1422
trnS-UGA	gene	translation-rna	−	35962	36054	92
psbZ	gene	photosystem-ii	+	36373	36562	189
trnG-GCC	gene	translation-rna	+	36833	36904	71
trnfM-CAU	gene	translation-rna	−	37058	37132	74
rps14	gene	ribosomal-protein	−	37281	37584	303
psaB	gene	photosystem-i	−	37711	39916	2205
psaA	gene	photosystem-i	−	39941	42194	2253
ycf3	gene	other	−	42860	44784	1924
trnS-GGA	gene	translation-rna	+	45668	45755	87
rps4	gene	ribosomal-protein	−	46040	46646	606
trnT-UGU	gene	translation-rna	−	46974	47047	73
trnL-UAA	gene	translation-rna	+	47669	48231	562
trnF-GAA	gene	translation-rna	+	48537	48610	73
ndhJ	gene	nad-dehydrogenase	−	49258	49735	477
ndhK	gene	nad-dehydrogenase	−	49842	50520	678
ndhC	gene	nad-dehydrogenase	−	50572	50935	363
trnV-UAC	gene	translation-rna	−	51779	52432	653
trnM-CAU	gene	translation-rna	+	52612	52685	73
atpE	gene	atp-synthase	−	52900	53302	402
atpB	gene	atp-synthase	−	53298	54786	1488
rbcL	gene	other	+	55535	56999	1464
accD	gene	other	+	57725	59192	1467
psaI	gene	photosystem-i	+	59749	59860	111
ycf4	gene	other	+	60293	60848	555
cemA	gene	other	+	61585	62185	600
petA	gene	cytochrome	+	62391	63354	963
psbJ	gene	photosystem-ii	−	64389	64512	123
psbL	gene	photosystem-ii	−	64645	64867	222
psbF	gene	photosystem-ii	−	64785	64905	120
psbE	gene	photosystem-ii	−	64919	65171	252
petL	gene	cytochrome	+	66079	66175	96
petG	gene	cytochrome	+	66350	66464	114
trnW-CCA	gene	translation-rna	−	66582	66656	74
trnP-UGG	gene	translation-rna	−	66825	66899	74
psaJ	gene	photosystem-i	+	67171	67306	135
rpl33	gene	ribosomal-protein	+	67779	67980	201
rps18	gene	ribosomal-protein	+	68155	68461	306
rpl20	gene	ribosomal-protein	−	68696	69083	387
rps12	gene	ribosomal-protein	−	69883	98014	28131
rps12	gene	ribosomal-protein	+	69883	138786	68903
clpP	gene	other	−	70139	72072	1933
psbB	gene	photosystem-ii	+	72538	74065	1527
psbT	gene	photosystem-ii	+	74256	74358	102
psbN	gene	photosystem-ii	−	74431	74563	132
psbH	gene	photosystem-ii	+	74666	74888	222
petB	gene	cytochrome	+	75012	76380	1368
petD	gene	cytochrome	+	76568	77770	1202
rpoA	gene	rna-polymerase	−	77932	78946	1014
rps11	gene	ribosomal-protein	−	79024	79441	417
rpl36	gene	ribosomal-protein	−	79542	79656	114
infA	gene	other	−	79751	79985	234
rps8	gene	ribosomal-protein	−	80104	80515	411
rpl14	gene	ribosomal-protein	−	80684	81053	369
rpl16	gene	ribosomal-protein	−	81179	82413	1234
rps3	gene	ribosomal-protein	−	82567	83230	663
rpl22	gene	ribosomal-protein	−	83231	83687	456
rps19	gene	ribosomal-protein	−	83746	84025	279
rpl2	gene	ribosomal-protein	−	84079	85568	1489
rpl23	gene	ribosomal-protein	−	85586	85868	282
trnI-CAU	gene	translation-rna	−	86027	86101	74
ycf2	gene	other	+	86189	92999	6810
ycf15	gene	other	+	93140	93338	198
trnL-CAA	gene	translation-rna	−	93593	93674	81
ndhB	gene	nad-dehydrogenase	−	94216	96374	2158
rps7	gene	ribosomal-protein	−	96702	97170	468
trnV-GAC	gene	translation-rna	+	99591	99663	72
rrn16	gene	ribosomal-rna	+	99890	101381	1491
trnI-GAU	gene	translation-rna	+	101679	102700	1021
trnA-UGC	gene	translation-rna	+	102764	103649	885
rrn23	gene	ribosomal-rna	+	103818	106631	2813
rrn4.5	gene	ribosomal-rna	+	106729	106832	103
rrn5	gene	ribosomal-rna	+	107079	107200	121
trnR-ACG	gene	translation-rna	+	107434	107508	74
trnN-GUU	gene	translation-rna	−	108054	108126	72
ndhF	gene	nad-dehydrogenase	−	109202	111443	2241
rpl32	gene	ribosomal-protein	+	111963	112140	177
trnL-UAG	gene	translation-rna	+	112584	112664	80
ccsA	gene	other	+	112760	113735	975
ndhD	gene	nad-dehydrogenase	−	113967	115470	1503
psaC	gene	photosystem-i	−	115589	115835	246
ndhE	gene	nad-dehydrogenase	−	116091	116397	306
ndhG	gene	nad-dehydrogenase	−	116627	117158	531
ndhI	gene	nad-dehydrogenase	−	117522	118023	501
ndhA	gene	nad-dehydrogenase	−	118103	120195	2092
ndhH	gene	nad-dehydrogenase	−	120196	121408	1212
rps15	gene	ribosomal-protein	−	121480	121813	333
ycf1	gene	other	−	122019	127665	5646
trnN-GUU	gene	translation-rna	+	127883	127955	72
trnR-ACG	gene	translation-rna	−	128501	128575	74
rrn5	gene	ribosomal-rna	−	128809	128930	121
rrn4.5	gene	ribosomal-rna	−	129177	129280	103
rrn23	gene	ribosomal-rna	−	129378	132191	2813
trnA-UGC	gene	translation-rna	−	132360	133245	885
trnI-GAU	gene	translation-rna	−	133309	134330	1021
ycf68	gene	other	−	133935	134175	240
rrn16	gene	ribosomal-rna	−	134628	136119	1491
trnV-GAC	gene	translation-rna	−	136346	136418	72
rps7	gene	ribosomal-protein	+	138839	139307	468
ndhB	gene	nad-dehydrogenase	+	139635	141793	2158
trnL-CAA	gene	translation-rna	+	142335	142416	81
ycf15	gene	other	−	142671	142869	198
ycf2	gene	other	−	143010	149820	6810
trnI-CAU	gene	translation-rna	+	149908	149982	74
rpl23	gene	ribosomal-protein	+	150141	150423	282
rpl2	gene	ribosomal-protein	+	150441	151930	1489

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomePQ059311.1DNA · accDPQ059311DNA · atpBPQ059311DNA · matKPQ059311DNA · ndhFPQ059311DNA · psbAPQ059311DNA · rbcLPQ059311DNA · rps12PQ059311DNA · ycf1PQ059311