Coordinate-aware organelle record

Scutellaria integrifolia chloroplast genome

Available PQ059295.1 151,669 bp 133 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

133 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	1	75	74
psbA	gene	photosystem-ii	−	380	1439	1059
trnK-UUU	gene	translation-rna	−	1681	4276	2595
matK	gene	other	−	1982	3518	1536
rps16	gene	ribosomal-protein	−	5178	6340	1162
trnQ-UUG	gene	translation-rna	−	7432	7504	72
psbK	gene	photosystem-ii	+	7836	8022	186
psbI	gene	photosystem-ii	+	8403	8514	111
trnS-GCU	gene	translation-rna	−	8622	8710	88
trnG-UCC	gene	translation-rna	+	9391	10153	762
trnR-UCU	gene	translation-rna	+	10327	10399	72
atpA	gene	atp-synthase	−	10501	12025	1524
atpF	gene	atp-synthase	−	12097	13331	1234
atpH	gene	atp-synthase	−	13693	13939	246
atpI	gene	atp-synthase	−	14927	15671	744
rps2	gene	ribosomal-protein	−	16010	16847	837
rpoC2	gene	rna-polymerase	−	16943	21137	4194
rpoC1	gene	rna-polymerase	−	21291	24099	2808
rpoB	gene	rna-polymerase	−	24125	27338	3213
trnC-GCA	gene	translation-rna	+	28494	28565	71
petN	gene	cytochrome	+	29276	29366	90
psbM	gene	photosystem-ii	−	30366	30471	105
trnD-GUC	gene	translation-rna	−	30992	31066	74
trnY-GUA	gene	translation-rna	−	31185	31269	84
trnE-UUC	gene	translation-rna	−	31328	31401	73
trnT-GGU	gene	translation-rna	+	31984	32056	72
psbD	gene	photosystem-ii	+	33348	34410	1062
psbC	gene	photosystem-ii	+	34357	35779	1422
trnS-UGA	gene	translation-rna	−	36018	36110	92
psbZ	gene	photosystem-ii	+	36429	36618	189
trnG-GCC	gene	translation-rna	+	36893	36964	71
trnfM-CAU	gene	translation-rna	−	37117	37191	74
rps14	gene	ribosomal-protein	−	37340	37643	303
psaB	gene	photosystem-i	−	37770	39975	2205
psaA	gene	photosystem-i	−	39999	42252	2253
ycf3	gene	other	−	42947	44859	1912
trnS-GGA	gene	translation-rna	+	45199	45286	87
rps4	gene	ribosomal-protein	−	45569	46175	606
trnT-UGU	gene	translation-rna	−	46514	46587	73
trnL-UAA	gene	translation-rna	+	47218	47782	564
trnF-GAA	gene	translation-rna	+	48087	48160	73
ndhJ	gene	nad-dehydrogenase	−	48811	49288	477
ndhK	gene	nad-dehydrogenase	−	49395	50073	678
ndhC	gene	nad-dehydrogenase	−	50125	50488	363
trnV-UAC	gene	translation-rna	−	51489	52142	653
trnM-CAU	gene	translation-rna	+	52322	52395	73
atpE	gene	atp-synthase	−	52605	53007	402
atpB	gene	atp-synthase	−	53003	54500	1497
rbcL	gene	other	+	55245	56709	1464
accD	gene	other	+	57420	58899	1479
psaI	gene	photosystem-i	+	59593	59704	111
ycf4	gene	other	+	60130	60685	555
cemA	gene	other	+	61425	62025	600
petA	gene	cytochrome	+	62231	63194	963
psbJ	gene	photosystem-ii	−	64236	64359	123
psbL	gene	photosystem-ii	−	64493	64610	117
psbF	gene	photosystem-ii	−	64633	64753	120
psbE	gene	photosystem-ii	−	64767	65019	252
petL	gene	cytochrome	+	65926	66022	96
petG	gene	cytochrome	+	66197	66311	114
trnW-CCA	gene	translation-rna	−	66429	66503	74
trnP-UGG	gene	translation-rna	−	66666	66740	74
psaJ	gene	photosystem-i	+	67008	67143	135
rpl33	gene	ribosomal-protein	+	67615	67816	201
rps18	gene	ribosomal-protein	+	67989	68295	306
rpl20	gene	ribosomal-protein	−	68530	68917	387
rps12	gene	ribosomal-protein	−	69713	97810	28097
rps12	gene	ribosomal-protein	+	69713	138449	68736
clpP	gene	other	−	69968	71898	1930
psbB	gene	photosystem-ii	+	72349	73876	1527
psbT	gene	photosystem-ii	+	74067	74169	102
psbN	gene	photosystem-ii	−	74242	74374	132
psbH	gene	photosystem-ii	+	74477	74699	222
petB	gene	cytochrome	+	74823	76194	1371
petD	gene	cytochrome	+	76382	77588	1206
rpoA	gene	rna-polymerase	−	77750	78764	1014
rps11	gene	ribosomal-protein	−	78835	79252	417
rpl36	gene	ribosomal-protein	−	79353	79467	114
infA	gene	other	−	79562	79796	234
rps8	gene	ribosomal-protein	−	79916	80327	411
rpl14	gene	ribosomal-protein	−	80485	80854	369
rpl16	gene	ribosomal-protein	−	80980	82224	1244
rps3	gene	ribosomal-protein	−	82378	83041	663
rpl22	gene	ribosomal-protein	−	83042	83498	456
rps19	gene	ribosomal-protein	−	83562	83841	279
rpl2	gene	ribosomal-protein	−	83897	85380	1483
rpl23	gene	ribosomal-protein	−	85398	85680	282
trnI-CAU	gene	translation-rna	−	85839	85913	74
ycf2	gene	other	+	86001	92799	6798
ycf15	gene	other	+	92940	93138	198
trnL-CAA	gene	translation-rna	−	93398	93479	81
ndhB	gene	nad-dehydrogenase	−	94021	96224	2203
rps7	gene	ribosomal-protein	−	96498	96966	468
trnV-GAC	gene	translation-rna	+	99379	99451	72
rrn16	gene	ribosomal-rna	+	99678	101169	1491
trnI-GAU	gene	translation-rna	+	101467	102488	1021
trnA-UGC	gene	translation-rna	+	102552	103440	888
rrn23	gene	ribosomal-rna	+	103602	106415	2813
rrn4.5	gene	ribosomal-rna	+	106513	106616	103
rrn5	gene	ribosomal-rna	+	106863	106984	121
trnR-ACG	gene	translation-rna	+	107208	107282	74
trnN-GUU	gene	translation-rna	−	107829	107901	72
ndhF	gene	nad-dehydrogenase	−	108977	111218	2241
rpl32	gene	ribosomal-protein	+	111741	111918	177
trnL-UAG	gene	translation-rna	+	112353	112433	80
ccsA	gene	other	+	112526	113501	975
ndhD	gene	nad-dehydrogenase	−	113735	115238	1503
psaC	gene	photosystem-i	−	115364	115610	246
ndhE	gene	nad-dehydrogenase	−	115861	116167	306
ndhG	gene	nad-dehydrogenase	−	116397	116928	531
ndhI	gene	nad-dehydrogenase	−	117292	117793	501
ndhA	gene	nad-dehydrogenase	−	117873	119971	2098
ndhH	gene	nad-dehydrogenase	−	119972	121154	1182
rps15	gene	ribosomal-protein	−	121250	121523	273
ycf1	gene	other	−	121796	127349	5553
trnN-GUU	gene	translation-rna	+	127567	127639	72
trnR-ACG	gene	translation-rna	−	128186	128260	74
rrn5	gene	ribosomal-rna	−	128484	128605	121
rrn4.5	gene	ribosomal-rna	−	128852	128955	103
rrn23	gene	ribosomal-rna	−	129053	131866	2813
trnA-UGC	gene	translation-rna	−	132028	132916	888
trnI-GAU	gene	translation-rna	−	132980	134001	1021
ycf68	gene	other	−	133606	133846	240
rrn16	gene	ribosomal-rna	−	134299	135790	1491
trnV-GAC	gene	translation-rna	−	136017	136089	72
rps7	gene	ribosomal-protein	+	138502	138970	468
ndhB	gene	nad-dehydrogenase	+	139244	141447	2203
trnL-CAA	gene	translation-rna	+	141989	142070	81
ycf15	gene	other	−	142330	142528	198
ycf2	gene	other	−	142669	149467	6798
trnI-CAU	gene	translation-rna	+	149555	149629	74
rpl23	gene	ribosomal-protein	+	149788	150070	282
rpl2	gene	ribosomal-protein	+	150088	151571	1483

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomePQ059295.1DNA · accDPQ059295DNA · atpBPQ059295DNA · matKPQ059295DNA · ndhFPQ059295DNA · psbAPQ059295DNA · rbcLPQ059295DNA · rps12PQ059295DNA · ycf1PQ059295