Coordinate-aware organelle record

Scutellaria isocheila chloroplast genome

Available PQ058270.1 151,979 bp 133 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

133 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	2	76	74
psbA	gene	photosystem-ii	−	374	1433	1059
trnK-UUU	gene	translation-rna	−	1673	4270	2597
matK	gene	other	−	1968	3513	1545
rps16	gene	ribosomal-protein	−	5192	6327	1135
trnQ-UUG	gene	translation-rna	−	7512	7584	72
psbK	gene	photosystem-ii	+	7908	8094	186
psbI	gene	photosystem-ii	+	8487	8598	111
trnS-GCU	gene	translation-rna	−	8717	8805	88
trnG-UCC	gene	translation-rna	+	9482	10241	759
trnR-UCU	gene	translation-rna	+	10415	10487	72
atpA	gene	atp-synthase	−	10583	12107	1524
atpF	gene	atp-synthase	−	12189	13438	1249
atpH	gene	atp-synthase	−	13799	14045	246
atpI	gene	atp-synthase	−	15034	15778	744
rps2	gene	ribosomal-protein	−	16124	16961	837
rpoC2	gene	rna-polymerase	−	17051	21251	4200
rpoC1	gene	rna-polymerase	−	21396	24243	2847
rpoB	gene	rna-polymerase	−	24269	27482	3213
trnC-GCA	gene	translation-rna	+	28641	28712	71
petN	gene	cytochrome	+	29415	29505	90
psbM	gene	photosystem-ii	−	30592	30706	114
trnD-GUC	gene	translation-rna	−	31248	31322	74
trnY-GUA	gene	translation-rna	−	31435	31519	84
trnE-UUC	gene	translation-rna	−	31574	31647	73
trnT-GGU	gene	translation-rna	+	32210	32282	72
psbD	gene	photosystem-ii	+	33576	34638	1062
psbC	gene	photosystem-ii	+	34585	36007	1422
trnS-UGA	gene	translation-rna	−	36250	36342	92
psbZ	gene	photosystem-ii	+	36661	36850	189
trnG-GCC	gene	translation-rna	+	37121	37192	71
trnfM-CAU	gene	translation-rna	−	37335	37409	74
rps14	gene	ribosomal-protein	−	37558	37861	303
psaB	gene	photosystem-i	−	37988	40193	2205
psaA	gene	photosystem-i	−	40218	42471	2253
ycf3	gene	other	−	43167	45092	1925
trnS-GGA	gene	translation-rna	+	45967	46054	87
rps4	gene	ribosomal-protein	−	46337	46943	606
trnT-UGU	gene	translation-rna	−	47279	47352	73
trnL-UAA	gene	translation-rna	+	48026	48593	567
trnF-GAA	gene	translation-rna	+	48897	48970	73
ndhJ	gene	nad-dehydrogenase	−	49620	50097	477
ndhK	gene	nad-dehydrogenase	−	50204	50882	678
ndhC	gene	nad-dehydrogenase	−	50935	51298	363
trnV-UAC	gene	translation-rna	−	51754	52403	649
trnM-CAU	gene	translation-rna	+	52583	52656	73
atpE	gene	atp-synthase	−	52864	53266	402
atpB	gene	atp-synthase	−	53262	54759	1497
rbcL	gene	other	+	55511	56972	1461
accD	gene	other	+	57688	59167	1479
psaI	gene	photosystem-i	+	59878	59989	111
ycf4	gene	other	+	60422	60977	555
cemA	gene	other	+	61718	62318	600
petA	gene	cytochrome	+	62524	63487	963
psbJ	gene	photosystem-ii	−	64503	64626	123
psbL	gene	photosystem-ii	−	64759	64876	117
psbF	gene	photosystem-ii	−	64899	65019	120
psbE	gene	photosystem-ii	−	65033	65285	252
petL	gene	cytochrome	+	66191	66287	96
petG	gene	cytochrome	+	66462	66576	114
trnW-CCA	gene	translation-rna	−	66694	66768	74
trnP-UGG	gene	translation-rna	−	66931	67005	74
psaJ	gene	photosystem-i	+	67279	67414	135
rpl33	gene	ribosomal-protein	+	67901	68102	201
rps18	gene	ribosomal-protein	+	68277	68604	327
rpl20	gene	ribosomal-protein	−	68842	69229	387
rps12	gene	ribosomal-protein	−	70012	98153	28141
rps12	gene	ribosomal-protein	+	70012	138744	68732
clpP	gene	other	−	70285	72229	1944
psbB	gene	photosystem-ii	+	72692	74219	1527
psbT	gene	photosystem-ii	+	74410	74518	108
psbN	gene	photosystem-ii	−	74578	74710	132
psbH	gene	photosystem-ii	+	74813	75035	222
petB	gene	cytochrome	+	75160	76530	1370
petD	gene	cytochrome	+	76718	77930	1212
rpoA	gene	rna-polymerase	−	78282	79110	828
rps11	gene	ribosomal-protein	−	79181	79598	417
rpl36	gene	ribosomal-protein	−	79698	79812	114
infA	gene	other	−	79907	80141	234
rps8	gene	ribosomal-protein	−	80257	80668	411
rpl14	gene	ribosomal-protein	−	80836	81205	369
rpl16	gene	ribosomal-protein	−	81316	82562	1246
rps3	gene	ribosomal-protein	−	82709	83372	663
rpl22	gene	ribosomal-protein	−	83386	83830	444
rps19	gene	ribosomal-protein	−	83889	84168	279
rpl2	gene	ribosomal-protein	−	84222	85705	1483
rpl23	gene	ribosomal-protein	−	85723	86005	282
trnI-CAU	gene	translation-rna	−	86164	86238	74
ycf2	gene	other	+	86326	93142	6816
ycf15	gene	other	+	93232	93481	249
trnL-CAA	gene	translation-rna	−	93741	93822	81
ndhB	gene	nad-dehydrogenase	−	94355	96567	2212
rps7	gene	ribosomal-protein	−	96841	97309	468
trnV-GAC	gene	translation-rna	+	99718	99790	72
rrn16	gene	ribosomal-rna	+	100017	101508	1491
trnI-GAU	gene	translation-rna	+	101806	102826	1020
trnA-UGC	gene	translation-rna	+	102890	103773	883
rrn23	gene	ribosomal-rna	+	103942	106755	2813
rrn4.5	gene	ribosomal-rna	+	106853	106956	103
rrn5	gene	ribosomal-rna	+	107203	107324	121
trnR-ACG	gene	translation-rna	+	107558	107632	74
trnN-GUU	gene	translation-rna	−	108188	108260	72
ndhF	gene	nad-dehydrogenase	−	109336	111568	2232
rpl32	gene	ribosomal-protein	+	112083	112260	177
trnL-UAG	gene	translation-rna	+	112694	112774	80
ccsA	gene	other	+	112877	113852	975
ndhD	gene	nad-dehydrogenase	−	114085	115615	1530
psaC	gene	photosystem-i	−	115714	115960	246
ndhE	gene	nad-dehydrogenase	−	116198	116504	306
ndhG	gene	nad-dehydrogenase	−	116725	117256	531
ndhI	gene	nad-dehydrogenase	−	117618	118119	501
ndhA	gene	nad-dehydrogenase	−	118199	120291	2092
ndhH	gene	nad-dehydrogenase	−	120292	121504	1212
rps15	gene	ribosomal-protein	−	121562	121835	273
ycf1	gene	other	−	122123	127517	5394
trnN-GUU	gene	translation-rna	+	127846	127918	72
trnR-ACG	gene	translation-rna	−	128474	128548	74
rrn5	gene	ribosomal-rna	−	128782	128903	121
rrn4.5	gene	ribosomal-rna	−	129150	129253	103
rrn23	gene	ribosomal-rna	−	129351	132164	2813
trnA-UGC	gene	translation-rna	−	132333	133216	883
trnI-GAU	gene	translation-rna	−	133280	134300	1020
ycf68	gene	other	−	133851	134145	294
rrn16	gene	ribosomal-rna	−	134598	136089	1491
trnV-GAC	gene	translation-rna	−	136316	136388	72
rps7	gene	ribosomal-protein	+	138797	139265	468
ndhB	gene	nad-dehydrogenase	+	139539	141751	2212
trnL-CAA	gene	translation-rna	+	142284	142365	81
ycf15	gene	other	−	142625	142874	249
ycf2	gene	other	−	142964	149780	6816
trnI-CAU	gene	translation-rna	+	149868	149942	74
rpl23	gene	ribosomal-protein	+	150101	150383	282
rpl2	gene	ribosomal-protein	+	150401	151884	1483

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomePQ058270.1DNA · accDPQ058270DNA · atpBPQ058270DNA · matKPQ058270DNA · ndhFPQ058270DNA · psbAPQ058270DNA · rbcLPQ058270DNA · rps12PQ058270DNA · ycf1PQ058270