Coordinate-aware organelle record

Scutellaria javanica chloroplast genome

Available PQ059314.1 152,070 bp 133 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

133 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	2	76	74
psbA	gene	photosystem-ii	−	364	1423	1059
trnK-UUU	gene	translation-rna	−	1656	4245	2589
matK	gene	other	−	1951	3487	1536
rps16	gene	ribosomal-protein	−	5136	6309	1173
trnQ-UUG	gene	translation-rna	−	7328	7400	72
psbK	gene	photosystem-ii	+	7724	7910	186
psbI	gene	photosystem-ii	+	8300	8411	111
trnS-GCU	gene	translation-rna	−	8529	8617	88
trnG-UCC	gene	translation-rna	+	9298	10059	761
trnR-UCU	gene	translation-rna	+	10229	10301	72
atpA	gene	atp-synthase	−	10397	11921	1524
atpF	gene	atp-synthase	−	12003	13231	1228
atpH	gene	atp-synthase	−	13586	13832	246
atpI	gene	atp-synthase	−	14827	15571	744
rps2	gene	ribosomal-protein	−	15919	16630	711
rpoC2	gene	rna-polymerase	−	16846	21052	4206
rpoC1	gene	rna-polymerase	−	21206	24037	2831
rpoB	gene	rna-polymerase	−	24063	27276	3213
trnC-GCA	gene	translation-rna	+	28444	28515	71
petN	gene	cytochrome	+	29226	29316	90
psbM	gene	photosystem-ii	−	30308	30413	105
trnD-GUC	gene	translation-rna	−	30939	31013	74
trnY-GUA	gene	translation-rna	−	31126	31210	84
trnE-UUC	gene	translation-rna	−	31269	31342	73
trnT-GGU	gene	translation-rna	+	31917	31989	72
psbD	gene	photosystem-ii	+	33296	34358	1062
psbC	gene	photosystem-ii	+	34305	35727	1422
trnS-UGA	gene	translation-rna	−	35962	36054	92
psbZ	gene	photosystem-ii	+	36373	36562	189
trnG-GCC	gene	translation-rna	+	36833	36904	71
trnfM-CAU	gene	translation-rna	−	37058	37132	74
rps14	gene	ribosomal-protein	−	37281	37584	303
psaB	gene	photosystem-i	−	37711	39916	2205
psaA	gene	photosystem-i	−	39941	42194	2253
ycf3	gene	other	−	42863	44787	1924
trnS-GGA	gene	translation-rna	+	45677	45764	87
rps4	gene	ribosomal-protein	−	46049	46655	606
trnT-UGU	gene	translation-rna	−	46997	47070	73
trnL-UAA	gene	translation-rna	+	47755	48316	561
trnF-GAA	gene	translation-rna	+	48622	48695	73
ndhJ	gene	nad-dehydrogenase	−	49343	49820	477
ndhK	gene	nad-dehydrogenase	−	49927	50605	678
ndhC	gene	nad-dehydrogenase	−	50657	51020	363
trnV-UAC	gene	translation-rna	−	51875	52528	653
trnM-CAU	gene	translation-rna	+	52708	52781	73
atpE	gene	atp-synthase	−	52996	53398	402
atpB	gene	atp-synthase	−	53394	54882	1488
rbcL	gene	other	+	55631	57095	1464
accD	gene	other	+	57828	59295	1467
psaI	gene	photosystem-i	+	59852	59963	111
ycf4	gene	other	+	60396	60951	555
cemA	gene	other	+	61688	62288	600
petA	gene	cytochrome	+	62494	63457	963
psbJ	gene	photosystem-ii	−	64484	64607	123
psbL	gene	photosystem-ii	−	64740	64962	222
psbF	gene	photosystem-ii	−	64880	65000	120
psbE	gene	photosystem-ii	−	65014	65266	252
petL	gene	cytochrome	+	66174	66270	96
petG	gene	cytochrome	+	66445	66559	114
trnW-CCA	gene	translation-rna	−	66677	66751	74
trnP-UGG	gene	translation-rna	−	66926	67000	74
psaJ	gene	photosystem-i	+	67208	67406	198
rpl33	gene	ribosomal-protein	+	67879	68080	201
rps18	gene	ribosomal-protein	+	68254	68560	306
rpl20	gene	ribosomal-protein	−	68796	69183	387
rps12	gene	ribosomal-protein	−	69983	98089	28106
rps12	gene	ribosomal-protein	+	69983	138849	68866
clpP	gene	other	−	70239	72172	1933
psbB	gene	photosystem-ii	+	72638	74165	1527
psbT	gene	photosystem-ii	+	74356	74458	102
psbN	gene	photosystem-ii	−	74531	74663	132
psbH	gene	photosystem-ii	+	74766	74988	222
petB	gene	cytochrome	+	75112	76480	1368
petD	gene	cytochrome	+	76668	77870	1202
rpoA	gene	rna-polymerase	−	78032	79046	1014
rps11	gene	ribosomal-protein	−	79117	79534	417
rpl36	gene	ribosomal-protein	−	79635	79749	114
infA	gene	other	−	79844	80078	234
rps8	gene	ribosomal-protein	−	80197	80608	411
rpl14	gene	ribosomal-protein	−	80777	81146	369
rpl16	gene	ribosomal-protein	−	81272	82506	1234
rps3	gene	ribosomal-protein	−	82660	83323	663
rpl22	gene	ribosomal-protein	−	83324	83780	456
rps19	gene	ribosomal-protein	−	83839	84118	279
rpl2	gene	ribosomal-protein	−	84172	85655	1483
rpl23	gene	ribosomal-protein	−	85673	85955	282
trnI-CAU	gene	translation-rna	−	86114	86188	74
ycf2	gene	other	+	86276	93074	6798
ycf15	gene	other	+	93164	93413	249
trnL-CAA	gene	translation-rna	−	93668	93749	81
ndhB	gene	nad-dehydrogenase	−	94291	96449	2158
rps7	gene	ribosomal-protein	−	96777	97245	468
trnV-GAC	gene	translation-rna	+	99666	99738	72
rrn16	gene	ribosomal-rna	+	99965	101456	1491
trnI-GAU	gene	translation-rna	+	101754	102775	1021
trnA-UGC	gene	translation-rna	+	102839	103724	885
rrn23	gene	ribosomal-rna	+	103893	106706	2813
rrn4.5	gene	ribosomal-rna	+	106804	106907	103
rrn5	gene	ribosomal-rna	+	107154	107275	121
trnR-ACG	gene	translation-rna	+	107509	107583	74
trnN-GUU	gene	translation-rna	−	108129	108201	72
ndhF	gene	nad-dehydrogenase	−	109277	111518	2241
rpl32	gene	ribosomal-protein	+	112038	112215	177
trnL-UAG	gene	translation-rna	+	112659	112739	80
ccsA	gene	other	+	112823	113798	975
ndhD	gene	nad-dehydrogenase	−	114030	115533	1503
psaC	gene	photosystem-i	−	115652	115898	246
ndhE	gene	nad-dehydrogenase	−	116154	116460	306
ndhG	gene	nad-dehydrogenase	−	116690	117221	531
ndhI	gene	nad-dehydrogenase	−	117585	118086	501
ndhA	gene	nad-dehydrogenase	−	118166	120258	2092
ndhH	gene	nad-dehydrogenase	−	120259	121441	1182
rps15	gene	ribosomal-protein	−	121543	121876	333
ycf1	gene	other	−	122082	127728	5646
trnN-GUU	gene	translation-rna	+	127946	128018	72
trnR-ACG	gene	translation-rna	−	128564	128638	74
rrn5	gene	ribosomal-rna	−	128872	128993	121
rrn4.5	gene	ribosomal-rna	−	129240	129343	103
rrn23	gene	ribosomal-rna	−	129441	132254	2813
trnA-UGC	gene	translation-rna	−	132423	133308	885
trnI-GAU	gene	translation-rna	−	133372	134393	1021
ycf68	gene	other	−	133998	134238	240
rrn16	gene	ribosomal-rna	−	134691	136182	1491
trnV-GAC	gene	translation-rna	−	136409	136481	72
rps7	gene	ribosomal-protein	+	138902	139370	468
ndhB	gene	nad-dehydrogenase	+	139698	141856	2158
trnL-CAA	gene	translation-rna	+	142398	142479	81
ycf15	gene	other	−	142734	142983	249
ycf2	gene	other	−	143073	149871	6798
trnI-CAU	gene	translation-rna	+	149959	150033	74
rpl23	gene	ribosomal-protein	+	150192	150474	282
rpl2	gene	ribosomal-protein	+	150492	151975	1483

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomePQ059314.1DNA · accDPQ059314DNA · atpBPQ059314DNA · matKPQ059314DNA · ndhFPQ059314DNA · psbAPQ059314DNA · rbcLPQ059314DNA · rps12PQ059314DNA · ycf1PQ059314