Coordinate-aware organelle record

Scutellaria karjaginii chloroplast genome

Available PQ059195.1 151,821 bp 133 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

133 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	3	77	74
psbA	gene	photosystem-ii	−	373	1432	1059
trnK-UUU	gene	translation-rna	−	1673	4255	2582
matK	gene	other	−	1963	3490	1527
rps16	gene	ribosomal-protein	−	5156	6316	1160
trnQ-UUG	gene	translation-rna	−	7058	7130	72
psbK	gene	photosystem-ii	+	7466	7652	186
psbI	gene	photosystem-ii	+	8042	8153	111
trnS-GCU	gene	translation-rna	−	8271	8359	88
trnG-UCC	gene	translation-rna	+	9061	9818	757
trnR-UCU	gene	translation-rna	+	9992	10064	72
atpA	gene	atp-synthase	−	10160	11684	1524
atpF	gene	atp-synthase	−	11765	12995	1230
atpH	gene	atp-synthase	−	13355	13601	246
atpI	gene	atp-synthase	−	14588	15332	744
rps2	gene	ribosomal-protein	−	15677	16388	711
rpoC2	gene	rna-polymerase	−	16603	20809	4206
rpoC1	gene	rna-polymerase	−	20963	23800	2837
rpoB	gene	rna-polymerase	−	23826	27039	3213
trnC-GCA	gene	translation-rna	+	28199	28270	71
petN	gene	cytochrome	+	28985	29075	90
psbM	gene	photosystem-ii	−	30083	30188	105
trnD-GUC	gene	translation-rna	−	30713	30787	74
trnY-GUA	gene	translation-rna	−	30900	30984	84
trnE-UUC	gene	translation-rna	−	31043	31116	73
trnT-GGU	gene	translation-rna	+	31691	31763	72
psbD	gene	photosystem-ii	+	33068	34130	1062
psbC	gene	photosystem-ii	+	34077	35499	1422
trnS-UGA	gene	translation-rna	−	35734	35826	92
psbZ	gene	photosystem-ii	+	36141	36330	189
trnG-GCC	gene	translation-rna	+	36607	36678	71
trnfM-CAU	gene	translation-rna	−	36823	36897	74
rps14	gene	ribosomal-protein	−	37051	37354	303
psaB	gene	photosystem-i	−	37482	39687	2205
psaA	gene	photosystem-i	−	39712	41965	2253
ycf3	gene	other	−	42671	44594	1923
trnS-GGA	gene	translation-rna	+	45476	45563	87
rps4	gene	ribosomal-protein	−	45838	46444	606
trnT-UGU	gene	translation-rna	−	46785	46858	73
trnL-UAA	gene	translation-rna	+	47538	48098	560
trnF-GAA	gene	translation-rna	+	48402	48475	73
ndhJ	gene	nad-dehydrogenase	−	49122	49599	477
ndhK	gene	nad-dehydrogenase	−	49707	50385	678
ndhC	gene	nad-dehydrogenase	−	50438	50801	363
trnV-UAC	gene	translation-rna	−	51786	52439	653
trnM-CAU	gene	translation-rna	+	52627	52700	73
atpE	gene	atp-synthase	−	52893	53295	402
atpB	gene	atp-synthase	−	53291	54788	1497
rbcL	gene	other	+	55538	57002	1464
accD	gene	other	+	57715	59194	1479
psaI	gene	photosystem-i	+	59900	60011	111
ycf4	gene	other	+	60444	60999	555
cemA	gene	other	+	61747	62347	600
petA	gene	cytochrome	+	62553	63516	963
psbJ	gene	photosystem-ii	−	64526	64649	123
psbL	gene	photosystem-ii	−	64782	64899	117
psbF	gene	photosystem-ii	−	64922	65042	120
psbE	gene	photosystem-ii	−	65056	65308	252
petL	gene	cytochrome	+	66185	66281	96
petG	gene	cytochrome	+	66456	66570	114
trnW-CCA	gene	translation-rna	−	66688	66762	74
trnP-UGG	gene	translation-rna	−	66931	67005	74
psaJ	gene	photosystem-i	+	67213	67411	198
rpl33	gene	ribosomal-protein	+	67895	68096	201
rps18	gene	ribosomal-protein	+	68270	68576	306
rpl20	gene	ribosomal-protein	−	68810	69197	387
rps12	gene	ribosomal-protein	−	69991	98040	28049
rps12	gene	ribosomal-protein	+	69991	138589	68598
clpP	gene	other	−	70246	72175	1929
psbB	gene	photosystem-ii	+	72626	74153	1527
psbT	gene	photosystem-ii	+	74344	74452	108
psbN	gene	photosystem-ii	−	74512	74644	132
psbH	gene	photosystem-ii	+	74747	74969	222
petB	gene	cytochrome	+	75093	76462	1369
petD	gene	cytochrome	+	76644	77851	1207
rpoA	gene	rna-polymerase	−	78183	79005	822
rps11	gene	ribosomal-protein	−	79076	79493	417
rpl36	gene	ribosomal-protein	−	79594	79708	114
infA	gene	other	−	79802	80036	234
rps8	gene	ribosomal-protein	−	80159	80570	411
rpl14	gene	ribosomal-protein	−	80721	81090	369
rpl16	gene	ribosomal-protein	−	81216	82450	1234
rps3	gene	ribosomal-protein	−	82605	83268	663
rpl22	gene	ribosomal-protein	−	83269	83725	456
rps19	gene	ribosomal-protein	−	83784	84063	279
rpl2	gene	ribosomal-protein	−	84117	85599	1482
rpl23	gene	ribosomal-protein	−	85617	85899	282
trnI-CAU	gene	translation-rna	−	86058	86132	74
ycf2	gene	other	+	86220	93021	6801
ycf15	gene	other	+	93111	93360	249
trnL-CAA	gene	translation-rna	−	93619	93700	81
ndhB	gene	nad-dehydrogenase	−	94242	96454	2212
rps7	gene	ribosomal-protein	−	96728	97196	468
trnV-GAC	gene	translation-rna	+	99611	99683	72
rrn16	gene	ribosomal-rna	+	99909	101400	1491
trnI-GAU	gene	translation-rna	+	101698	102719	1021
trnA-UGC	gene	translation-rna	+	102783	103670	887
rrn23	gene	ribosomal-rna	+	103839	106651	2812
rrn4.5	gene	ribosomal-rna	+	106749	106852	103
rrn5	gene	ribosomal-rna	+	107099	107220	121
trnR-ACG	gene	translation-rna	+	107454	107528	74
trnN-GUU	gene	translation-rna	−	108076	108148	72
ndhF	gene	nad-dehydrogenase	−	109204	111466	2262
rpl32	gene	ribosomal-protein	+	111793	111970	177
trnL-UAG	gene	translation-rna	+	112417	112497	80
ccsA	gene	other	+	112585	113560	975
ndhD	gene	nad-dehydrogenase	−	113816	115346	1530
psaC	gene	photosystem-i	−	115446	115692	246
ndhE	gene	nad-dehydrogenase	−	115947	116253	306
ndhG	gene	nad-dehydrogenase	−	116469	117000	531
ndhI	gene	nad-dehydrogenase	−	117366	117867	501
ndhA	gene	nad-dehydrogenase	−	117966	120088	2122
ndhH	gene	nad-dehydrogenase	−	120089	121301	1212
rps15	gene	ribosomal-protein	−	121367	121640	273
ycf1	gene	other	−	121835	127472	5637
trnN-GUU	gene	translation-rna	+	127690	127762	72
trnR-ACG	gene	translation-rna	−	128310	128384	74
rrn5	gene	ribosomal-rna	−	128618	128739	121
rrn4.5	gene	ribosomal-rna	−	128986	129089	103
rrn23	gene	ribosomal-rna	−	129187	131999	2812
trnA-UGC	gene	translation-rna	−	132168	133055	887
trnI-GAU	gene	translation-rna	−	133119	134140	1021
ycf68	gene	other	−	133691	133985	294
rrn16	gene	ribosomal-rna	−	134438	135929	1491
trnV-GAC	gene	translation-rna	−	136155	136227	72
rps7	gene	ribosomal-protein	+	138642	139110	468
ndhB	gene	nad-dehydrogenase	+	139384	141596	2212
trnL-CAA	gene	translation-rna	+	142138	142219	81
ycf15	gene	other	−	142478	142727	249
ycf2	gene	other	−	142817	149618	6801
trnI-CAU	gene	translation-rna	+	149706	149780	74
rpl23	gene	ribosomal-protein	+	149939	150221	282
rpl2	gene	ribosomal-protein	+	150239	151721	1482

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomePQ059195.1DNA · accDPQ059195DNA · atpBPQ059195DNA · matKPQ059195DNA · ndhFPQ059195DNA · psbAPQ059195DNA · rbcLPQ059195DNA · rps12PQ059195DNA · ycf1PQ059195