Coordinate-aware organelle record

Scutellaria kotkaiensis chloroplast genome

Available PQ059229.1 152,279 bp 133 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

133 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	9	83	74
psbA	gene	photosystem-ii	−	380	1439	1059
trnK-UUU	gene	translation-rna	−	1673	4247	2574
matK	gene	other	−	1955	3482	1527
rps16	gene	ribosomal-protein	−	5147	6306	1159
trnQ-UUG	gene	translation-rna	−	7439	7511	72
psbK	gene	photosystem-ii	+	7835	8021	186
psbI	gene	photosystem-ii	+	8408	8519	111
trnS-GCU	gene	translation-rna	−	8635	8723	88
trnG-UCC	gene	translation-rna	+	9417	10174	757
trnR-UCU	gene	translation-rna	+	10348	10420	72
atpA	gene	atp-synthase	−	10516	12040	1524
atpF	gene	atp-synthase	−	12122	13352	1230
atpH	gene	atp-synthase	−	13714	13960	246
atpI	gene	atp-synthase	−	14947	15691	744
rps2	gene	ribosomal-protein	−	16036	16747	711
rpoC2	gene	rna-polymerase	−	16960	21166	4206
rpoC1	gene	rna-polymerase	−	21320	24162	2842
rpoB	gene	rna-polymerase	−	24188	27401	3213
trnC-GCA	gene	translation-rna	+	28562	28633	71
petN	gene	cytochrome	+	29348	29438	90
psbM	gene	photosystem-ii	−	30505	30610	105
trnD-GUC	gene	translation-rna	−	31135	31209	74
trnY-GUA	gene	translation-rna	−	31322	31406	84
trnE-UUC	gene	translation-rna	−	31465	31538	73
trnT-GGU	gene	translation-rna	+	32113	32185	72
psbD	gene	photosystem-ii	+	33488	34550	1062
psbC	gene	photosystem-ii	+	34497	35919	1422
trnS-UGA	gene	translation-rna	−	36154	36246	92
psbZ	gene	photosystem-ii	+	36561	36750	189
trnG-GCC	gene	translation-rna	+	37028	37099	71
trnfM-CAU	gene	translation-rna	−	37243	37317	74
rps14	gene	ribosomal-protein	−	37471	37774	303
psaB	gene	photosystem-i	−	37901	40106	2205
psaA	gene	photosystem-i	−	40131	42384	2253
ycf3	gene	other	−	43089	45013	1924
trnS-GGA	gene	translation-rna	+	45901	45988	87
rps4	gene	ribosomal-protein	−	46273	46879	606
trnT-UGU	gene	translation-rna	−	47222	47295	73
trnL-UAA	gene	translation-rna	+	47979	48539	560
trnF-GAA	gene	translation-rna	+	48845	48918	73
ndhJ	gene	nad-dehydrogenase	−	49565	50042	477
ndhK	gene	nad-dehydrogenase	−	50150	50828	678
ndhC	gene	nad-dehydrogenase	−	50881	51244	363
trnV-UAC	gene	translation-rna	−	52220	52873	653
trnM-CAU	gene	translation-rna	+	53061	53134	73
atpE	gene	atp-synthase	−	53327	53729	402
atpB	gene	atp-synthase	−	53725	55222	1497
rbcL	gene	other	+	55972	57436	1464
accD	gene	other	+	58160	59639	1479
psaI	gene	photosystem-i	+	60344	60455	111
ycf4	gene	other	+	60888	61443	555
cemA	gene	other	+	62191	62791	600
petA	gene	cytochrome	+	62997	63960	963
psbJ	gene	photosystem-ii	−	64968	65091	123
psbL	gene	photosystem-ii	−	65224	65341	117
psbF	gene	photosystem-ii	−	65364	65484	120
psbE	gene	photosystem-ii	−	65498	65750	252
petL	gene	cytochrome	+	66629	66725	96
petG	gene	cytochrome	+	66900	67014	114
trnW-CCA	gene	translation-rna	−	67132	67206	74
trnP-UGG	gene	translation-rna	−	67375	67449	74
psaJ	gene	photosystem-i	+	67657	67855	198
rpl33	gene	ribosomal-protein	+	68330	68531	201
rps18	gene	ribosomal-protein	+	68704	69010	306
rpl20	gene	ribosomal-protein	−	69243	69630	387
rps12	gene	ribosomal-protein	−	70412	98490	28078
rps12	gene	ribosomal-protein	+	70412	139038	68626
clpP	gene	other	−	70679	72612	1933
psbB	gene	photosystem-ii	+	73063	74590	1527
psbT	gene	photosystem-ii	+	74780	74888	108
psbN	gene	photosystem-ii	−	74948	75080	132
psbH	gene	photosystem-ii	+	75183	75405	222
petB	gene	cytochrome	+	75529	76904	1375
petD	gene	cytochrome	+	77086	78292	1206
rpoA	gene	rna-polymerase	−	78646	79447	801
rps11	gene	ribosomal-protein	−	79518	79935	417
rpl36	gene	ribosomal-protein	−	80036	80150	114
infA	gene	other	−	80244	80478	234
rps8	gene	ribosomal-protein	−	80600	81011	411
rpl14	gene	ribosomal-protein	−	81162	81531	369
rpl16	gene	ribosomal-protein	−	81657	82891	1234
rps3	gene	ribosomal-protein	−	83046	83709	663
rpl22	gene	ribosomal-protein	−	83710	84166	456
rps19	gene	ribosomal-protein	−	84225	84504	279
rpl2	gene	ribosomal-protein	−	84558	86040	1482
rpl23	gene	ribosomal-protein	−	86058	86340	282
trnI-CAU	gene	translation-rna	−	86499	86573	74
ycf2	gene	other	+	86661	93471	6810
ycf15	gene	other	+	93561	93810	249
trnL-CAA	gene	translation-rna	−	94069	94150	81
ndhB	gene	nad-dehydrogenase	−	94692	96850	2158
rps7	gene	ribosomal-protein	−	97178	97646	468
trnV-GAC	gene	translation-rna	+	100061	100133	72
rrn16	gene	ribosomal-rna	+	100359	101850	1491
trnI-GAU	gene	translation-rna	+	102148	103169	1021
trnA-UGC	gene	translation-rna	+	103233	104119	886
rrn23	gene	ribosomal-rna	+	104288	107100	2812
rrn4.5	gene	ribosomal-rna	+	107198	107301	103
rrn5	gene	ribosomal-rna	+	107548	107669	121
trnR-ACG	gene	translation-rna	+	107903	107977	74
trnN-GUU	gene	translation-rna	−	108525	108597	72
ndhF	gene	nad-dehydrogenase	−	109653	111915	2262
rpl32	gene	ribosomal-protein	+	112242	112419	177
trnL-UAG	gene	translation-rna	+	112865	112945	80
ccsA	gene	other	+	113047	114022	975
ndhD	gene	nad-dehydrogenase	−	114278	115781	1503
psaC	gene	photosystem-i	−	115908	116154	246
ndhE	gene	nad-dehydrogenase	−	116405	116711	306
ndhG	gene	nad-dehydrogenase	−	116927	117458	531
ndhI	gene	nad-dehydrogenase	−	117824	118325	501
ndhA	gene	nad-dehydrogenase	−	118405	120533	2128
ndhH	gene	nad-dehydrogenase	−	120534	121716	1182
rps15	gene	ribosomal-protein	−	121812	122085	273
ycf1	gene	other	−	122282	127922	5640
trnN-GUU	gene	translation-rna	+	128140	128212	72
trnR-ACG	gene	translation-rna	−	128760	128834	74
rrn5	gene	ribosomal-rna	−	129068	129189	121
rrn4.5	gene	ribosomal-rna	−	129436	129539	103
rrn23	gene	ribosomal-rna	−	129637	132449	2812
trnA-UGC	gene	translation-rna	−	132618	133504	886
trnI-GAU	gene	translation-rna	−	133568	134589	1021
ycf68	gene	other	−	134140	134434	294
rrn16	gene	ribosomal-rna	−	134887	136378	1491
trnV-GAC	gene	translation-rna	−	136604	136676	72
rps7	gene	ribosomal-protein	+	139091	139559	468
ndhB	gene	nad-dehydrogenase	+	139887	142045	2158
trnL-CAA	gene	translation-rna	+	142587	142668	81
ycf15	gene	other	−	142927	143176	249
ycf2	gene	other	−	143266	150076	6810
trnI-CAU	gene	translation-rna	+	150164	150238	74
rpl23	gene	ribosomal-protein	+	150397	150679	282
rpl2	gene	ribosomal-protein	+	150697	152179	1482

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomePQ059229.1DNA · accDPQ059229DNA · atpBPQ059229DNA · matKPQ059229DNA · ndhFPQ059229DNA · psbAPQ059229DNA · rbcLPQ059229DNA · rps12PQ059229DNA · ycf1PQ059229