Coordinate-aware organelle record

Scutellaria laeteviolacea var. maekawae chloroplast genome

Available PQ059359.1 151,889 bp 133 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

133 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	2	76	74
psbA	gene	photosystem-ii	−	368	1427	1059
trnK-UUU	gene	translation-rna	−	1668	4249	2581
matK	gene	other	−	1955	3491	1536
rps16	gene	ribosomal-protein	−	5121	6285	1164
trnQ-UUG	gene	translation-rna	−	7305	7377	72
psbK	gene	photosystem-ii	+	7701	7887	186
psbI	gene	photosystem-ii	+	8279	8390	111
trnS-GCU	gene	translation-rna	−	8509	8597	88
trnG-UCC	gene	translation-rna	+	9166	9927	761
trnR-UCU	gene	translation-rna	+	10097	10169	72
atpA	gene	atp-synthase	−	10265	11789	1524
atpF	gene	atp-synthase	−	11871	13099	1228
atpH	gene	atp-synthase	−	13456	13702	246
atpI	gene	atp-synthase	−	14697	15441	744
rps2	gene	ribosomal-protein	−	15788	16625	837
rpoC2	gene	rna-polymerase	−	16715	20921	4206
rpoC1	gene	rna-polymerase	−	21075	23905	2830
rpoB	gene	rna-polymerase	−	23931	27144	3213
trnC-GCA	gene	translation-rna	+	28324	28395	71
petN	gene	cytochrome	+	29106	29196	90
psbM	gene	photosystem-ii	−	30181	30286	105
trnD-GUC	gene	translation-rna	−	30812	30886	74
trnY-GUA	gene	translation-rna	−	30999	31083	84
trnE-UUC	gene	translation-rna	−	31142	31215	73
trnT-GGU	gene	translation-rna	+	31790	31862	72
psbD	gene	photosystem-ii	+	33164	34226	1062
psbC	gene	photosystem-ii	+	34173	35595	1422
trnS-UGA	gene	translation-rna	−	35832	35924	92
psbZ	gene	photosystem-ii	+	36243	36432	189
trnG-GCC	gene	translation-rna	+	36703	36774	71
trnfM-CAU	gene	translation-rna	−	36927	37001	74
rps14	gene	ribosomal-protein	−	37150	37453	303
psaB	gene	photosystem-i	−	37580	39785	2205
psaA	gene	photosystem-i	−	39810	42063	2253
ycf3	gene	other	−	42734	44657	1923
trnS-GGA	gene	translation-rna	+	45532	45619	87
rps4	gene	ribosomal-protein	−	45896	46502	606
trnT-UGU	gene	translation-rna	−	46849	46922	73
trnL-UAA	gene	translation-rna	+	47607	48168	561
trnF-GAA	gene	translation-rna	+	48468	48541	73
ndhJ	gene	nad-dehydrogenase	−	49189	49666	477
ndhK	gene	nad-dehydrogenase	−	49773	50451	678
ndhC	gene	nad-dehydrogenase	−	50503	50866	363
trnV-UAC	gene	translation-rna	−	51703	52356	653
trnM-CAU	gene	translation-rna	+	52536	52609	73
atpE	gene	atp-synthase	−	52824	53226	402
atpB	gene	atp-synthase	−	53222	54710	1488
rbcL	gene	other	+	55465	56926	1461
accD	gene	other	+	57648	59115	1467
psaI	gene	photosystem-i	+	59672	59783	111
ycf4	gene	other	+	60216	60771	555
cemA	gene	other	+	61508	62108	600
petA	gene	cytochrome	+	62314	63277	963
psbJ	gene	photosystem-ii	−	64311	64434	123
psbL	gene	photosystem-ii	−	64567	64684	117
psbF	gene	photosystem-ii	−	64707	64827	120
psbE	gene	photosystem-ii	−	64841	65093	252
petL	gene	cytochrome	+	65993	66089	96
petG	gene	cytochrome	+	66264	66378	114
trnW-CCA	gene	translation-rna	−	66496	66570	74
trnP-UGG	gene	translation-rna	−	66739	66813	74
psaJ	gene	photosystem-i	+	67085	67220	135
rpl33	gene	ribosomal-protein	+	67695	67896	201
rps18	gene	ribosomal-protein	+	68070	68376	306
rpl20	gene	ribosomal-protein	−	68612	68999	387
rps12	gene	ribosomal-protein	−	69799	97923	28124
rps12	gene	ribosomal-protein	+	69799	138656	68857
clpP	gene	other	−	70047	71991	1944
psbB	gene	photosystem-ii	+	72457	73984	1527
psbT	gene	photosystem-ii	+	74175	74277	102
psbN	gene	photosystem-ii	−	74350	74482	132
psbH	gene	photosystem-ii	+	74585	74807	222
petB	gene	cytochrome	+	74931	76300	1369
petD	gene	cytochrome	+	76488	77690	1202
rpoA	gene	rna-polymerase	−	77852	78866	1014
rps11	gene	ribosomal-protein	−	78937	79354	417
rpl36	gene	ribosomal-protein	−	79455	79569	114
infA	gene	other	−	79664	79898	234
rps8	gene	ribosomal-protein	−	80017	80428	411
rpl14	gene	ribosomal-protein	−	80598	80967	369
rpl16	gene	ribosomal-protein	−	81093	82328	1235
rps3	gene	ribosomal-protein	−	82482	83145	663
rpl22	gene	ribosomal-protein	−	83146	83602	456
rps19	gene	ribosomal-protein	−	83661	83940	279
rpl2	gene	ribosomal-protein	−	83994	85477	1483
rpl23	gene	ribosomal-protein	−	85495	85777	282
trnI-CAU	gene	translation-rna	−	85936	86010	74
ycf2	gene	other	+	86098	92908	6810
ycf15	gene	other	+	92998	93247	249
trnL-CAA	gene	translation-rna	−	93502	93583	81
ndhB	gene	nad-dehydrogenase	−	94125	96283	2158
rps7	gene	ribosomal-protein	−	96611	97079	468
trnV-GAC	gene	translation-rna	+	99492	99564	72
rrn16	gene	ribosomal-rna	+	99791	101282	1491
trnI-GAU	gene	translation-rna	+	101580	102601	1021
trnA-UGC	gene	translation-rna	+	102665	103548	883
rrn23	gene	ribosomal-rna	+	103717	106530	2813
rrn4.5	gene	ribosomal-rna	+	106628	106731	103
rrn5	gene	ribosomal-rna	+	106978	107099	121
trnR-ACG	gene	translation-rna	+	107333	107407	74
trnN-GUU	gene	translation-rna	−	107953	108025	72
ndhF	gene	nad-dehydrogenase	−	109101	111342	2241
rpl32	gene	ribosomal-protein	+	111862	112039	177
trnL-UAG	gene	translation-rna	+	112473	112553	80
ccsA	gene	other	+	112650	113625	975
ndhD	gene	nad-dehydrogenase	−	113857	115360	1503
psaC	gene	photosystem-i	−	115480	115726	246
ndhE	gene	nad-dehydrogenase	−	115982	116288	306
ndhG	gene	nad-dehydrogenase	−	116508	117039	531
ndhI	gene	nad-dehydrogenase	−	117403	117904	501
ndhA	gene	nad-dehydrogenase	−	117984	120075	2091
ndhH	gene	nad-dehydrogenase	−	120076	121288	1212
rps15	gene	ribosomal-protein	−	121360	121693	333
ycf1	gene	other	−	121899	127545	5646
trnN-GUU	gene	translation-rna	+	127763	127835	72
trnR-ACG	gene	translation-rna	−	128381	128455	74
rrn5	gene	ribosomal-rna	−	128689	128810	121
rrn4.5	gene	ribosomal-rna	−	129057	129160	103
rrn23	gene	ribosomal-rna	−	129258	132071	2813
trnA-UGC	gene	translation-rna	−	132240	133123	883
trnI-GAU	gene	translation-rna	−	133187	134208	1021
ycf68	gene	other	−	133813	134053	240
rrn16	gene	ribosomal-rna	−	134506	135997	1491
trnV-GAC	gene	translation-rna	−	136224	136296	72
rps7	gene	ribosomal-protein	+	138709	139177	468
ndhB	gene	nad-dehydrogenase	+	139505	141663	2158
trnL-CAA	gene	translation-rna	+	142205	142286	81
ycf15	gene	other	−	142541	142790	249
ycf2	gene	other	−	142880	149690	6810
trnI-CAU	gene	translation-rna	+	149778	149852	74
rpl23	gene	ribosomal-protein	+	150011	150293	282
rpl2	gene	ribosomal-protein	+	150311	151794	1483

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomePQ059359.1DNA · accDPQ059359DNA · atpBPQ059359DNA · matKPQ059359DNA · ndhFPQ059359DNA · psbAPQ059359DNA · rbcLPQ059359DNA · rps12PQ059359DNA · ycf1PQ059359