Coordinate-aware organelle record

Scutellaria lanipes chloroplast genome

Available PQ058244.1 151,880 bp 133 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

133 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	3	77	74
psbA	gene	photosystem-ii	−	373	1432	1059
trnK-UUU	gene	translation-rna	−	1673	4255	2582
matK	gene	other	−	1963	3490	1527
rps16	gene	ribosomal-protein	−	5156	6317	1161
trnQ-UUG	gene	translation-rna	−	7062	7134	72
psbK	gene	photosystem-ii	+	7458	7644	186
psbI	gene	photosystem-ii	+	8033	8144	111
trnS-GCU	gene	translation-rna	−	8262	8350	88
trnG-UCC	gene	translation-rna	+	9052	9809	757
trnR-UCU	gene	translation-rna	+	9983	10055	72
atpA	gene	atp-synthase	−	10151	11675	1524
atpF	gene	atp-synthase	−	11756	12986	1230
atpH	gene	atp-synthase	−	13346	13592	246
atpI	gene	atp-synthase	−	14579	15323	744
rps2	gene	ribosomal-protein	−	15668	16379	711
rpoC2	gene	rna-polymerase	−	16593	20799	4206
rpoC1	gene	rna-polymerase	−	20953	23790	2837
rpoB	gene	rna-polymerase	−	23816	27029	3213
trnC-GCA	gene	translation-rna	+	28189	28260	71
petN	gene	cytochrome	+	28975	29065	90
psbM	gene	photosystem-ii	−	30131	30236	105
trnD-GUC	gene	translation-rna	−	30761	30835	74
trnY-GUA	gene	translation-rna	−	30948	31032	84
trnE-UUC	gene	translation-rna	−	31091	31164	73
trnT-GGU	gene	translation-rna	+	31738	31810	72
psbD	gene	photosystem-ii	+	33116	34178	1062
psbC	gene	photosystem-ii	+	34125	35547	1422
trnS-UGA	gene	translation-rna	−	35782	35874	92
psbZ	gene	photosystem-ii	+	36189	36378	189
trnG-GCC	gene	translation-rna	+	36654	36725	71
trnfM-CAU	gene	translation-rna	−	36872	36946	74
rps14	gene	ribosomal-protein	−	37095	37398	303
psaB	gene	photosystem-i	−	37526	39731	2205
psaA	gene	photosystem-i	−	39756	42009	2253
ycf3	gene	other	−	42701	44623	1922
trnS-GGA	gene	translation-rna	+	45522	45609	87
rps4	gene	ribosomal-protein	−	45884	46490	606
trnT-UGU	gene	translation-rna	−	46836	46909	73
trnL-UAA	gene	translation-rna	+	47590	48150	560
trnF-GAA	gene	translation-rna	+	48450	48523	73
ndhJ	gene	nad-dehydrogenase	−	49171	49648	477
ndhK	gene	nad-dehydrogenase	−	49756	50434	678
ndhC	gene	nad-dehydrogenase	−	50487	50850	363
trnV-UAC	gene	translation-rna	−	51835	52488	653
trnM-CAU	gene	translation-rna	+	52676	52749	73
atpE	gene	atp-synthase	−	52942	53344	402
atpB	gene	atp-synthase	−	53340	54837	1497
rbcL	gene	other	+	55587	57051	1464
accD	gene	other	+	57764	59243	1479
psaI	gene	photosystem-i	+	59948	60059	111
ycf4	gene	other	+	60492	61047	555
cemA	gene	other	+	61794	62394	600
petA	gene	cytochrome	+	62600	63563	963
psbJ	gene	photosystem-ii	−	64570	64693	123
psbL	gene	photosystem-ii	−	64826	64943	117
psbF	gene	photosystem-ii	−	64966	65086	120
psbE	gene	photosystem-ii	−	65100	65352	252
petL	gene	cytochrome	+	66228	66324	96
petG	gene	cytochrome	+	66499	66613	114
trnW-CCA	gene	translation-rna	−	66731	66805	74
trnP-UGG	gene	translation-rna	−	66975	67049	74
psaJ	gene	photosystem-i	+	67320	67455	135
rpl33	gene	ribosomal-protein	+	67930	68131	201
rps18	gene	ribosomal-protein	+	68305	68611	306
rpl20	gene	ribosomal-protein	−	68845	69232	387
rps12	gene	ribosomal-protein	−	70014	98077	28063
rps12	gene	ribosomal-protein	+	70014	138648	68634
clpP	gene	other	−	70281	72210	1929
psbB	gene	photosystem-ii	+	72661	74188	1527
psbT	gene	photosystem-ii	+	74379	74487	108
psbN	gene	photosystem-ii	−	74547	74679	132
psbH	gene	photosystem-ii	+	74782	75004	222
petB	gene	cytochrome	+	75128	76498	1370
petD	gene	cytochrome	+	76680	77887	1207
rpoA	gene	rna-polymerase	−	78241	79042	801
rps11	gene	ribosomal-protein	−	79113	79530	417
rpl36	gene	ribosomal-protein	−	79631	79745	114
infA	gene	other	−	79839	80073	234
rps8	gene	ribosomal-protein	−	80196	80607	411
rpl14	gene	ribosomal-protein	−	80759	81128	369
rpl16	gene	ribosomal-protein	−	81254	82487	1233
rps3	gene	ribosomal-protein	−	82642	83305	663
rpl22	gene	ribosomal-protein	−	83306	83762	456
rps19	gene	ribosomal-protein	−	83821	84100	279
rpl2	gene	ribosomal-protein	−	84154	85636	1482
rpl23	gene	ribosomal-protein	−	85654	85936	282
trnI-CAU	gene	translation-rna	−	86095	86169	74
ycf2	gene	other	+	86257	93058	6801
ycf15	gene	other	+	93199	93397	198
trnL-CAA	gene	translation-rna	−	93656	93737	81
ndhB	gene	nad-dehydrogenase	−	94279	96491	2212
rps7	gene	ribosomal-protein	−	96765	97233	468
trnV-GAC	gene	translation-rna	+	99648	99720	72
rrn16	gene	ribosomal-rna	+	99946	101437	1491
trnI-GAU	gene	translation-rna	+	101735	102756	1021
trnA-UGC	gene	translation-rna	+	102820	103710	890
rrn23	gene	ribosomal-rna	+	103879	106691	2812
rrn4.5	gene	ribosomal-rna	+	106789	106892	103
rrn5	gene	ribosomal-rna	+	107139	107260	121
trnR-ACG	gene	translation-rna	+	107494	107568	74
trnN-GUU	gene	translation-rna	−	108116	108188	72
ndhF	gene	nad-dehydrogenase	−	109244	111506	2262
rpl32	gene	ribosomal-protein	+	111833	112010	177
trnL-UAG	gene	translation-rna	+	112456	112536	80
ccsA	gene	other	+	112637	113612	975
ndhD	gene	nad-dehydrogenase	−	113885	115415	1530
psaC	gene	photosystem-i	−	115515	115761	246
ndhE	gene	nad-dehydrogenase	−	116016	116322	306
ndhG	gene	nad-dehydrogenase	−	116538	117069	531
ndhI	gene	nad-dehydrogenase	−	117434	117935	501
ndhA	gene	nad-dehydrogenase	−	118020	120142	2122
ndhH	gene	nad-dehydrogenase	−	120143	121325	1182
rps15	gene	ribosomal-protein	−	121421	121694	273
ycf1	gene	other	−	121891	127528	5637
trnN-GUU	gene	translation-rna	+	127746	127818	72
trnR-ACG	gene	translation-rna	−	128366	128440	74
rrn5	gene	ribosomal-rna	−	128674	128795	121
rrn4.5	gene	ribosomal-rna	−	129042	129145	103
rrn23	gene	ribosomal-rna	−	129243	132055	2812
trnA-UGC	gene	translation-rna	−	132224	133114	890
trnI-GAU	gene	translation-rna	−	133178	134199	1021
ycf68	gene	other	−	133750	134044	294
rrn16	gene	ribosomal-rna	−	134497	135988	1491
trnV-GAC	gene	translation-rna	−	136214	136286	72
rps7	gene	ribosomal-protein	+	138701	139169	468
ndhB	gene	nad-dehydrogenase	+	139443	141655	2212
trnL-CAA	gene	translation-rna	+	142197	142278	81
ycf15	gene	other	−	142537	142735	198
ycf2	gene	other	−	142876	149677	6801
trnI-CAU	gene	translation-rna	+	149765	149839	74
rpl23	gene	ribosomal-protein	+	149998	150280	282
rpl2	gene	ribosomal-protein	+	150298	151780	1482

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomePQ058244.1DNA · accDPQ058244DNA · atpBPQ058244DNA · matKPQ058244DNA · ndhFPQ058244DNA · psbAPQ058244DNA · rbcLPQ058244DNA · rps12PQ058244DNA · ycf1PQ058244