Coordinate-aware organelle record

Scutellaria lateriflora chloroplast genome

Available PQ058260.1 152,353 bp 133 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

133 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	2	76	74
psbA	gene	photosystem-ii	−	378	1437	1059
trnK-UUU	gene	translation-rna	−	1669	4257	2588
matK	gene	other	−	1964	3500	1536
rps16	gene	ribosomal-protein	−	5162	6331	1169
trnQ-UUG	gene	translation-rna	−	7373	7445	72
psbK	gene	photosystem-ii	+	7769	7955	186
psbI	gene	photosystem-ii	+	8345	8456	111
trnS-GCU	gene	translation-rna	−	8580	8668	88
trnG-UCC	gene	translation-rna	+	9359	10124	765
trnR-UCU	gene	translation-rna	+	10298	10370	72
atpA	gene	atp-synthase	−	10466	11990	1524
atpF	gene	atp-synthase	−	12063	13291	1228
atpH	gene	atp-synthase	−	13659	13905	246
atpI	gene	atp-synthase	−	14901	15645	744
rps2	gene	ribosomal-protein	−	15986	16697	711
rpoC2	gene	rna-polymerase	−	16913	21119	4206
rpoC1	gene	rna-polymerase	−	21273	24109	2836
rpoB	gene	rna-polymerase	−	24135	27348	3213
trnC-GCA	gene	translation-rna	+	28511	28582	71
petN	gene	cytochrome	+	29292	29382	90
psbM	gene	photosystem-ii	−	30396	30501	105
trnD-GUC	gene	translation-rna	−	31026	31100	74
trnY-GUA	gene	translation-rna	−	31213	31297	84
trnE-UUC	gene	translation-rna	−	31356	31429	73
trnT-GGU	gene	translation-rna	+	32011	32083	72
psbD	gene	photosystem-ii	+	33391	34453	1062
psbC	gene	photosystem-ii	+	34400	35822	1422
trnS-UGA	gene	translation-rna	−	36057	36149	92
psbZ	gene	photosystem-ii	+	36459	36648	189
trnG-GCC	gene	translation-rna	+	36919	36990	71
trnfM-CAU	gene	translation-rna	−	37134	37208	74
rps14	gene	ribosomal-protein	−	37357	37660	303
psaB	gene	photosystem-i	−	37787	39992	2205
psaA	gene	photosystem-i	−	40017	42270	2253
ycf3	gene	other	−	42945	44868	1923
trnS-GGA	gene	translation-rna	+	45752	45839	87
rps4	gene	ribosomal-protein	−	46124	46730	606
trnT-UGU	gene	translation-rna	−	47070	47143	73
trnL-UAA	gene	translation-rna	+	47826	48407	581
trnF-GAA	gene	translation-rna	+	48713	48786	73
ndhJ	gene	nad-dehydrogenase	−	49434	49911	477
ndhK	gene	nad-dehydrogenase	−	50018	50696	678
ndhC	gene	nad-dehydrogenase	−	50748	51111	363
trnV-UAC	gene	translation-rna	−	52106	52759	653
trnM-CAU	gene	translation-rna	+	52939	53012	73
atpE	gene	atp-synthase	−	53221	53623	402
atpB	gene	atp-synthase	−	53619	55107	1488
rbcL	gene	other	+	55852	57316	1464
accD	gene	other	+	58026	59493	1467
psaI	gene	photosystem-i	+	60224	60335	111
ycf4	gene	other	+	60768	61323	555
cemA	gene	other	+	62071	62671	600
petA	gene	cytochrome	+	62877	63840	963
psbJ	gene	photosystem-ii	−	64830	64953	123
psbL	gene	photosystem-ii	−	65086	65203	117
psbF	gene	photosystem-ii	−	65226	65346	120
psbE	gene	photosystem-ii	−	65360	65612	252
petL	gene	cytochrome	+	66519	66615	96
petG	gene	cytochrome	+	66789	66903	114
trnW-CCA	gene	translation-rna	−	67021	67095	74
trnP-UGG	gene	translation-rna	−	67264	67338	74
psaJ	gene	photosystem-i	+	67609	67744	135
rpl33	gene	ribosomal-protein	+	68215	68416	201
rps18	gene	ribosomal-protein	+	68590	68896	306
rpl20	gene	ribosomal-protein	−	69132	69519	387
rps12	gene	ribosomal-protein	−	70307	98431	28124
rps12	gene	ribosomal-protein	+	70307	139120	68813
clpP	gene	other	−	70556	72492	1936
psbB	gene	photosystem-ii	+	72961	74488	1527
psbT	gene	photosystem-ii	+	74679	74781	102
psbN	gene	photosystem-ii	−	74854	74986	132
psbH	gene	photosystem-ii	+	75089	75311	222
petB	gene	cytochrome	+	75435	76803	1368
petD	gene	cytochrome	+	76991	78193	1202
rpoA	gene	rna-polymerase	−	78355	79369	1014
rps11	gene	ribosomal-protein	−	79440	79857	417
rpl36	gene	ribosomal-protein	−	79958	80072	114
infA	gene	other	−	80167	80401	234
rps8	gene	ribosomal-protein	−	80521	80932	411
rpl14	gene	ribosomal-protein	−	81097	81466	369
rpl16	gene	ribosomal-protein	−	81592	82836	1244
rps3	gene	ribosomal-protein	−	82990	83653	663
rpl22	gene	ribosomal-protein	−	83654	84110	456
rps19	gene	ribosomal-protein	−	84169	84448	279
rpl2	gene	ribosomal-protein	−	84502	85985	1483
rpl23	gene	ribosomal-protein	−	86003	86285	282
trnI-CAU	gene	translation-rna	−	86444	86518	74
ycf2	gene	other	+	86606	93416	6810
ycf15	gene	other	+	93506	93755	249
trnL-CAA	gene	translation-rna	−	94010	94091	81
ndhB	gene	nad-dehydrogenase	−	94633	96845	2212
rps7	gene	ribosomal-protein	−	97119	97587	468
trnV-GAC	gene	translation-rna	+	100002	100074	72
rrn16	gene	ribosomal-rna	+	100301	101792	1491
trnI-GAU	gene	translation-rna	+	102090	103111	1021
trnA-UGC	gene	translation-rna	+	103175	104061	886
rrn23	gene	ribosomal-rna	+	104230	107043	2813
rrn4.5	gene	ribosomal-rna	+	107141	107244	103
rrn5	gene	ribosomal-rna	+	107491	107612	121
trnR-ACG	gene	translation-rna	+	107846	107920	74
trnN-GUU	gene	translation-rna	−	108466	108538	72
ndhF	gene	nad-dehydrogenase	−	109614	111855	2241
rpl32	gene	ribosomal-protein	+	112365	112542	177
trnL-UAG	gene	translation-rna	+	112986	113066	80
ccsA	gene	other	+	113097	114138	1041
ndhD	gene	nad-dehydrogenase	−	114370	115894	1524
psaC	gene	photosystem-i	−	115992	116238	246
ndhE	gene	nad-dehydrogenase	−	116494	116800	306
ndhG	gene	nad-dehydrogenase	−	116941	117472	531
ndhI	gene	nad-dehydrogenase	−	117836	118337	501
ndhA	gene	nad-dehydrogenase	−	118417	120519	2102
ndhH	gene	nad-dehydrogenase	−	120520	121702	1182
rps15	gene	ribosomal-protein	−	121804	122137	333
ycf1	gene	other	−	122343	128004	5661
trnN-GUU	gene	translation-rna	+	128222	128294	72
trnR-ACG	gene	translation-rna	−	128840	128914	74
rrn5	gene	ribosomal-rna	−	129148	129269	121
rrn4.5	gene	ribosomal-rna	−	129516	129619	103
rrn23	gene	ribosomal-rna	−	129717	132530	2813
trnA-UGC	gene	translation-rna	−	132699	133585	886
trnI-GAU	gene	translation-rna	−	133649	134670	1021
ycf68	gene	other	−	134275	134515	240
rrn16	gene	ribosomal-rna	−	134968	136459	1491
trnV-GAC	gene	translation-rna	−	136686	136758	72
rps7	gene	ribosomal-protein	+	139173	139641	468
ndhB	gene	nad-dehydrogenase	+	139915	142127	2212
trnL-CAA	gene	translation-rna	+	142669	142750	81
ycf15	gene	other	−	143005	143254	249
ycf2	gene	other	−	143344	150154	6810
trnI-CAU	gene	translation-rna	+	150242	150316	74
rpl23	gene	ribosomal-protein	+	150475	150757	282
rpl2	gene	ribosomal-protein	+	150775	152258	1483

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomePQ058260.1DNA · accDPQ058260DNA · atpBPQ058260DNA · matKPQ058260DNA · ndhFPQ058260DNA · psbAPQ058260DNA · rbcLPQ058260DNA · rps12PQ058260DNA · ycf1PQ058260