Coordinate-aware organelle record

Scutellaria leptosiphon chloroplast genome

Available MW420940.1 152,146 bp 132 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

132 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	9	83	74
psbA	gene	photosystem-ii	−	380	1439	1059
trnK-UUU	gene	translation-rna	−	1676	4252	2576
matK	gene	other	−	1962	3489	1527
rps16	gene	ribosomal-protein	−	5153	6311	1158
trnQ-UUC	gene	translation-rna	−	7441	7513	72
psbK	gene	photosystem-ii	+	7837	8023	186
psbI	gene	photosystem-ii	+	8412	8523	111
trnS-GCU	gene	translation-rna	−	8640	8728	88
trnG-CGA	gene	translation-rna	+	9424	10181	757
trnR-UCU	gene	translation-rna	+	10355	10427	72
atpA	gene	atp-synthase	−	10523	12047	1524
atpF	gene	atp-synthase	−	12127	13356	1229
atpH	gene	atp-synthase	−	13714	13960	246
atpI	gene	atp-synthase	−	14947	15691	744
rps2	gene	ribosomal-protein	−	16036	16747	711
rpoC2	gene	rna-polymerase	−	16963	21175	4212
rpoC1	gene	rna-polymerase	−	21329	24157	2828
rpoB	gene	rna-polymerase	−	24183	27396	3213
trnC-GCA	gene	translation-rna	+	28556	28627	71
petN	gene	cytochrome	+	29337	29427	90
psbM	gene	photosystem-ii	−	30427	30532	105
trnD-GUC	gene	translation-rna	−	31057	31131	74
trnY-GUA	gene	translation-rna	−	31244	31328	84
trnE-UUC	gene	translation-rna	−	31387	31460	73
trnT-GGU	gene	translation-rna	+	32035	32107	72
psbD	gene	photosystem-ii	+	33410	34472	1062
psbC	gene	photosystem-ii	+	34419	35841	1422
trnS-UCA	gene	translation-rna	−	36076	36169	93
psbZ	gene	photosystem-ii	+	36484	36673	189
trnG-GCC	gene	translation-rna	+	36952	37023	71
trnfM-CAU	gene	translation-rna	−	37170	37244	74
rps14	gene	ribosomal-protein	−	37398	37701	303
psaB	gene	photosystem-i	−	37829	40034	2205
psaA	gene	photosystem-i	−	40059	42312	2253
ycf3	gene	other	−	43004	44926	1922
trnS-GGA	gene	translation-rna	+	45808	45895	87
rps4	gene	ribosomal-protein	−	46170	46776	606
trnT-UGU	gene	translation-rna	−	47115	47188	73
trnL-UAA	gene	translation-rna	+	47865	48426	561
trnF-GAA	gene	translation-rna	+	48729	48802	73
ndhJ	gene	nad-dehydrogenase	−	49442	49919	477
ndhK	gene	nad-dehydrogenase	−	50027	50705	678
ndhC	gene	nad-dehydrogenase	−	50758	51121	363
trnV-UAC	gene	translation-rna	−	52106	52759	653
trnM-CAU	gene	translation-rna	+	52947	53020	73
atpE	gene	atp-synthase	−	53213	53615	402
atpB	gene	atp-synthase	−	53611	55108	1497
rbcL	gene	other	+	55880	57323	1443
accD	gene	other	+	58048	59527	1479
psaI	gene	photosystem-i	+	60232	60343	111
ycf4	gene	other	+	60768	61323	555
cemA	gene	other	+	62011	62671	660
petA	gene	cytochrome	+	62877	63840	963
pabJ	gene	other	−	64845	64968	123
psbL	gene	photosystem-ii	−	65101	65218	117
psbF	gene	photosystem-ii	−	65241	65361	120
psbE	gene	photosystem-ii	−	65375	65627	252
petL	gene	cytochrome	+	66501	66597	96
petG	gene	cytochrome	+	66772	66886	114
trnW-CCA	gene	translation-rna	−	67004	67078	74
trnP-UGG	gene	translation-rna	−	67248	67322	74
psbJ	gene	photosystem-ii	+	67592	67727	135
rpl33	gene	ribosomal-protein	+	68204	68405	201
rps18	gene	ribosomal-protein	+	68579	68885	306
rpl20	gene	ribosomal-protein	−	69119	69506	387
rps12	gene	ribosomal-protein	−	70288	98378	28090
rps12	gene	ribosomal-protein	+	70288	138905	68617
clpP	gene	other	−	70555	72485	1930
psbB	gene	photosystem-ii	+	72943	74470	1527
psbT	gene	photosystem-ii	+	74661	74769	108
psbN	gene	photosystem-ii	−	74829	74961	132
psbH	gene	photosystem-ii	+	75064	75286	222
petB	gene	cytochrome	+	75410	76784	1374
petD	gene	cytochrome	+	76966	78172	1206
rpoA	gene	rna-polymerase	−	78480	79335	855
rps11	gene	ribosomal-protein	−	79406	79823	417
rpl36	gene	ribosomal-protein	−	79924	80038	114
infA	gene	other	−	80132	80366	234
rps8	gene	ribosomal-protein	−	80488	80899	411
rpl14	gene	ribosomal-protein	−	81050	81419	369
rpl16	gene	ribosomal-protein	−	81545	82779	1234
rps3	gene	ribosomal-protein	−	82934	83597	663
rpl22	gene	ribosomal-protein	−	83598	84054	456
rps19	gene	ribosomal-protein	−	84113	84392	279
rpl2	gene	ribosomal-protein	−	84446	85928	1482
rpl23	gene	ribosomal-protein	−	85946	86228	282
trnI-CAU	gene	translation-rna	−	86387	86461	74
ycf2	gene	other	+	86549	93359	6810
ycf15	gene	other	+	93500	93698	198
trnL-CAA	gene	translation-rna	−	93957	94038	81
ndhB	gene	nad-dehydrogenase	−	94580	96792	2212
rps7	gene	ribosomal-protein	−	97066	97534	468
trnV-GAC	gene	translation-rna	+	99949	100021	72
rrn16	gene	ribosomal-rna	+	100247	101738	1491
trnI-GAU	gene	translation-rna	+	102036	103055	1019
trnA-UGC	gene	translation-rna	+	103120	104008	888
rrn23	gene	ribosomal-rna	+	104177	106989	2812
rrn4.5	gene	ribosomal-rna	+	107087	107190	103
rrn5	gene	ribosomal-rna	+	107437	107558	121
trnR-ACG	gene	translation-rna	+	107792	107866	74
trnN-GUU	gene	translation-rna	+	108413	108485	72
ndhF	gene	nad-dehydrogenase	−	109541	111803	2262
rpl32	gene	ribosomal-protein	+	112130	112307	177
trnL-UAG	gene	translation-rna	+	112753	112833	80
ccsA	gene	other	+	112933	113908	975
ndhD	gene	nad-dehydrogenase	−	114164	115694	1530
psaC	gene	photosystem-i	−	115793	116039	246
ndhE	gene	nad-dehydrogenase	−	116294	116600	306
ndhG	gene	nad-dehydrogenase	−	116816	117347	531
ndhI	gene	nad-dehydrogenase	−	117713	118214	501
ndhA	gene	nad-dehydrogenase	−	118294	120416	2122
ndhH	gene	nad-dehydrogenase	−	120417	121599	1182
rps15	gene	ribosomal-protein	−	121695	121968	273
ycf1	gene	other	−	122161	127678	5517
trnN-GUU	gene	translation-rna	+	128007	128079	72
trnR-ACG	gene	translation-rna	−	128626	128700	74
rrn5	gene	ribosomal-rna	−	128934	129055	121
rrn4.5	gene	ribosomal-rna	−	129302	129405	103
rrn23	gene	ribosomal-rna	−	129503	132315	2812
trnA-UGC	gene	translation-rna	−	132484	133372	888
trnI-GAU	gene	translation-rna	−	133437	134456	1019
rrn16	gene	ribosomal-rna	−	134754	136245	1491
trnV-GAC	gene	translation-rna	−	136471	136543	72
rps7	gene	ribosomal-protein	+	138958	139426	468
ndhB	gene	nad-dehydrogenase	+	139700	141912	2212
trnL-CAA	gene	translation-rna	+	142454	142535	81
ycf15	gene	other	−	142794	142992	198
ycf2	gene	other	−	143133	149943	6810
trnI-CAU	gene	translation-rna	+	150031	150105	74
rpl23	gene	ribosomal-protein	+	150264	150546	282
rpl2	gene	ribosomal-protein	+	150564	152046	1482

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomeMW420940.1DNA · accDMW420940DNA · atpBMW420940DNA · matKMW420940DNA · ndhFMW420940DNA · psbAMW420940DNA · rbcLMW420940DNA · rps12MW420940DNA · ycf1MW420940