Coordinate-aware organelle record

Scutellaria linarioides chloroplast genome

Available PQ059316.1 152,025 bp 133 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

133 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	2	76	74
psbA	gene	photosystem-ii	−	368	1427	1059
trnK-UUU	gene	translation-rna	−	1660	4249	2589
matK	gene	other	−	1955	3491	1536
rps16	gene	ribosomal-protein	−	5121	6289	1168
trnQ-UUG	gene	translation-rna	−	7308	7380	72
psbK	gene	photosystem-ii	+	7704	7890	186
psbI	gene	photosystem-ii	+	8279	8390	111
trnS-GCU	gene	translation-rna	−	8507	8595	88
trnG-UCC	gene	translation-rna	+	9277	10038	761
trnR-UCU	gene	translation-rna	+	10208	10280	72
atpA	gene	atp-synthase	−	10376	11900	1524
atpF	gene	atp-synthase	−	11982	13210	1228
atpH	gene	atp-synthase	−	13572	13818	246
atpI	gene	atp-synthase	−	14813	15557	744
rps2	gene	ribosomal-protein	−	15905	16616	711
rpoC2	gene	rna-polymerase	−	16832	21038	4206
rpoC1	gene	rna-polymerase	−	21192	24021	2829
rpoB	gene	rna-polymerase	−	24047	27260	3213
trnC-GCA	gene	translation-rna	+	28420	28491	71
petN	gene	cytochrome	+	29200	29290	90
psbM	gene	photosystem-ii	−	30295	30400	105
trnD-GUC	gene	translation-rna	−	30926	31000	74
trnY-GUA	gene	translation-rna	−	31113	31197	84
trnE-UUC	gene	translation-rna	−	31257	31330	73
trnT-GGU	gene	translation-rna	+	31905	31977	72
psbD	gene	photosystem-ii	+	33277	34339	1062
psbC	gene	photosystem-ii	+	34286	35708	1422
trnS-UGA	gene	translation-rna	−	35944	36036	92
psbZ	gene	photosystem-ii	+	36355	36544	189
trnG-GCC	gene	translation-rna	+	36815	36886	71
trnfM-CAU	gene	translation-rna	−	37039	37113	74
rps14	gene	ribosomal-protein	−	37262	37565	303
psaB	gene	photosystem-i	−	37692	39897	2205
psaA	gene	photosystem-i	−	39922	42175	2253
ycf3	gene	other	−	42844	44766	1922
trnS-GGA	gene	translation-rna	+	45651	45738	87
rps4	gene	ribosomal-protein	−	46023	46629	606
trnT-UGU	gene	translation-rna	−	46969	47042	73
trnL-UAA	gene	translation-rna	+	47719	48280	561
trnF-GAA	gene	translation-rna	+	48585	48658	73
ndhJ	gene	nad-dehydrogenase	−	49305	49782	477
ndhK	gene	nad-dehydrogenase	−	49889	50567	678
ndhC	gene	nad-dehydrogenase	−	50619	50982	363
trnV-UAC	gene	translation-rna	−	51837	52490	653
trnM-CAU	gene	translation-rna	+	52670	52743	73
atpE	gene	atp-synthase	−	52958	53360	402
atpB	gene	atp-synthase	−	53356	54844	1488
rbcL	gene	other	+	55594	57055	1461
accD	gene	other	+	57790	59257	1467
psaI	gene	photosystem-i	+	59814	59925	111
ycf4	gene	other	+	60350	60905	555
cemA	gene	other	+	61642	62242	600
petA	gene	cytochrome	+	62448	63411	963
psbJ	gene	photosystem-ii	−	64445	64568	123
psbL	gene	photosystem-ii	−	64701	64818	117
psbF	gene	photosystem-ii	−	64841	64961	120
psbE	gene	photosystem-ii	−	64975	65227	252
petL	gene	cytochrome	+	66135	66231	96
petG	gene	cytochrome	+	66406	66520	114
trnW-CCA	gene	translation-rna	−	66638	66712	74
trnP-UGG	gene	translation-rna	−	66881	66955	74
psaJ	gene	photosystem-i	+	67227	67362	135
rpl33	gene	ribosomal-protein	+	67835	68036	201
rps18	gene	ribosomal-protein	+	68210	68516	306
rpl20	gene	ribosomal-protein	−	68754	69141	387
rps12	gene	ribosomal-protein	−	69929	98056	28127
rps12	gene	ribosomal-protein	+	69929	138792	68863
clpP	gene	other	−	70197	72131	1934
psbB	gene	photosystem-ii	+	72597	74124	1527
psbT	gene	photosystem-ii	+	74315	74417	102
psbN	gene	photosystem-ii	−	74490	74622	132
psbH	gene	photosystem-ii	+	74725	74947	222
petB	gene	cytochrome	+	75071	76438	1367
petD	gene	cytochrome	+	76626	77828	1202
rpoA	gene	rna-polymerase	−	77990	79004	1014
rps11	gene	ribosomal-protein	−	79076	79493	417
rpl36	gene	ribosomal-protein	−	79594	79708	114
infA	gene	other	−	79803	80037	234
rps8	gene	ribosomal-protein	−	80156	80567	411
rpl14	gene	ribosomal-protein	−	80738	81107	369
rpl16	gene	ribosomal-protein	−	81233	82460	1227
rps3	gene	ribosomal-protein	−	82615	83278	663
rpl22	gene	ribosomal-protein	−	83279	83735	456
rps19	gene	ribosomal-protein	−	83794	84073	279
rpl2	gene	ribosomal-protein	−	84127	85610	1483
rpl23	gene	ribosomal-protein	−	85628	85910	282
trnI-CAU	gene	translation-rna	−	86069	86143	74
ycf2	gene	other	+	86231	93041	6810
ycf15	gene	other	+	93182	93380	198
trnL-CAA	gene	translation-rna	−	93635	93716	81
ndhB	gene	nad-dehydrogenase	−	94258	96470	2212
rps7	gene	ribosomal-protein	−	96744	97212	468
trnV-GAC	gene	translation-rna	+	99633	99705	72
rrn16	gene	ribosomal-rna	+	99932	101423	1491
trnI-GAU	gene	translation-rna	+	101721	102748	1027
trnA-UGC	gene	translation-rna	+	102812	103694	882
rrn23	gene	ribosomal-rna	+	103863	106676	2813
rrn4.5	gene	ribosomal-rna	+	106774	106877	103
rrn5	gene	ribosomal-rna	+	107124	107245	121
trnR-ACG	gene	translation-rna	+	107479	107553	74
trnN-GUU	gene	translation-rna	−	108092	108164	72
ndhF	gene	nad-dehydrogenase	−	109240	111481	2241
rpl32	gene	ribosomal-protein	+	112001	112178	177
trnL-UAG	gene	translation-rna	+	112615	112695	80
ccsA	gene	other	+	112791	113766	975
ndhD	gene	nad-dehydrogenase	−	113998	115501	1503
psaC	gene	photosystem-i	−	115620	115866	246
ndhE	gene	nad-dehydrogenase	−	116122	116428	306
ndhG	gene	nad-dehydrogenase	−	116649	117180	531
ndhI	gene	nad-dehydrogenase	−	117541	118042	501
ndhA	gene	nad-dehydrogenase	−	118122	120214	2092
ndhH	gene	nad-dehydrogenase	−	120215	121427	1212
rps15	gene	ribosomal-protein	−	121499	121832	333
ycf1	gene	other	−	122029	127675	5646
trnN-GUU	gene	translation-rna	+	127893	127965	72
trnR-ACG	gene	translation-rna	−	128504	128578	74
rrn5	gene	ribosomal-rna	−	128812	128933	121
rrn4.5	gene	ribosomal-rna	−	129180	129283	103
rrn23	gene	ribosomal-rna	−	129381	132194	2813
trnA-UGC	gene	translation-rna	−	132363	133245	882
trnI-GAU	gene	translation-rna	−	133309	134336	1027
ycf68	gene	other	−	133941	134181	240
rrn16	gene	ribosomal-rna	−	134634	136125	1491
trnV-GAC	gene	translation-rna	−	136352	136424	72
rps7	gene	ribosomal-protein	+	138845	139313	468
ndhB	gene	nad-dehydrogenase	+	139587	141799	2212
trnL-CAA	gene	translation-rna	+	142341	142422	81
ycf15	gene	other	−	142677	142875	198
ycf2	gene	other	−	143016	149826	6810
trnI-CAU	gene	translation-rna	+	149914	149988	74
rpl23	gene	ribosomal-protein	+	150147	150429	282
rpl2	gene	ribosomal-protein	+	150447	151930	1483

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomePQ059316.1DNA · accDPQ059316DNA · atpBPQ059316DNA · matKPQ059316DNA · ndhFPQ059316DNA · psbAPQ059316DNA · rbcLPQ059316DNA · rps12PQ059316DNA · ycf1PQ059316