Coordinate-aware organelle record

Scutellaria linearis chloroplast genome

Available MW420945.1 151,745 bp 132 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

132 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	3	77	74
psbA	gene	photosystem-ii	−	373	1432	1059
trnK-UUU	gene	translation-rna	−	1677	4246	2569
matK	gene	other	−	1964	3485	1521
rps16	gene	ribosomal-protein	−	5155	6315	1160
trnQ-UUC	gene	translation-rna	−	7056	7128	72
psbK	gene	photosystem-ii	+	7452	7638	186
psbI	gene	photosystem-ii	+	8027	8138	111
trnS-GCU	gene	translation-rna	−	8256	8344	88
trnG-CGA	gene	translation-rna	+	9044	9801	757
trnR-UCU	gene	translation-rna	+	9975	10047	72
atpA	gene	atp-synthase	−	10143	11667	1524
atpF	gene	atp-synthase	−	11749	12979	1230
atpH	gene	atp-synthase	−	13338	13584	246
atpI	gene	atp-synthase	−	14571	15315	744
rps2	gene	ribosomal-protein	−	15660	16371	711
rpoC2	gene	rna-polymerase	−	16585	20791	4206
rpoC1	gene	rna-polymerase	−	20945	23774	2829
rpoB	gene	rna-polymerase	−	23800	27013	3213
trnC-GCA	gene	translation-rna	+	28173	28244	71
petN	gene	cytochrome	+	28956	29046	90
psbM	gene	photosystem-ii	−	30075	30180	105
trnD-GUC	gene	translation-rna	−	30705	30779	74
trnY-GUA	gene	translation-rna	−	30892	30976	84
trnE-UUC	gene	translation-rna	−	31035	31108	73
trnT-GGU	gene	translation-rna	+	31676	31748	72
psbD	gene	photosystem-ii	+	33051	34113	1062
psbC	gene	photosystem-ii	+	34060	35482	1422
trnS-UCA	gene	translation-rna	−	35717	35810	93
psbZ	gene	photosystem-ii	+	36125	36314	189
trnG-GCC	gene	translation-rna	+	36588	36659	71
trnfM-CAU	gene	translation-rna	−	36804	36878	74
rps14	gene	ribosomal-protein	−	37031	37334	303
psaB	gene	photosystem-i	−	37462	39667	2205
psaA	gene	photosystem-i	−	39692	41945	2253
ycf3	gene	other	−	42628	44550	1922
trnS-GGA	gene	translation-rna	+	45431	45518	87
rps4	gene	ribosomal-protein	−	45788	46394	606
trnT-UGU	gene	translation-rna	−	46733	46806	73
trnL-UAA	gene	translation-rna	+	47486	48046	560
trnF-GAA	gene	translation-rna	+	48356	48429	73
ndhJ	gene	nad-dehydrogenase	−	49075	49552	477
ndhK	gene	nad-dehydrogenase	−	49660	50338	678
ndhC	gene	nad-dehydrogenase	−	50391	50754	363
trnV-UAC	gene	translation-rna	−	51739	52392	653
trnM-CAU	gene	translation-rna	+	52580	52653	73
atpE	gene	atp-synthase	−	52846	53248	402
atpB	gene	atp-synthase	−	53244	54741	1497
rbcL	gene	other	+	55513	56956	1443
accD	gene	other	+	57669	59148	1479
psaI	gene	photosystem-i	+	59853	59964	111
ycf4	gene	other	+	60397	60952	555
cemA	gene	other	+	61640	62300	660
petA	gene	cytochrome	+	62506	63469	963
pabJ	gene	other	−	64476	64599	123
psbL	gene	photosystem-ii	−	64732	64849	117
psbF	gene	photosystem-ii	−	64872	64992	120
psbE	gene	photosystem-ii	−	65006	65258	252
petL	gene	cytochrome	+	66132	66228	96
petG	gene	cytochrome	+	66403	66517	114
trnW-CCA	gene	translation-rna	−	66635	66709	74
trnP-UGG	gene	translation-rna	−	66878	66952	74
psbJ	gene	photosystem-ii	+	67223	67358	135
rpl33	gene	ribosomal-protein	+	67835	68036	201
rps18	gene	ribosomal-protein	+	68210	68516	306
rpl20	gene	ribosomal-protein	−	68751	69138	387
rps12	gene	ribosomal-protein	−	69921	97974	28053
rps12	gene	ribosomal-protein	+	69921	138513	68592
clpP	gene	other	−	70188	72118	1930
psbB	gene	photosystem-ii	+	72569	74096	1527
psbT	gene	photosystem-ii	+	74286	74394	108
psbN	gene	photosystem-ii	−	74454	74586	132
psbH	gene	photosystem-ii	+	74689	74911	222
petB	gene	cytochrome	+	75035	76403	1368
petD	gene	cytochrome	+	76585	77792	1207
rpoA	gene	rna-polymerase	−	78146	78947	801
rps11	gene	ribosomal-protein	−	79018	79435	417
rpl36	gene	ribosomal-protein	−	79536	79650	114
infA	gene	other	−	79744	79978	234
rps8	gene	ribosomal-protein	−	80099	80510	411
rpl14	gene	ribosomal-protein	−	80662	81031	369
rpl16	gene	ribosomal-protein	−	81157	82384	1227
rps3	gene	ribosomal-protein	−	82539	83202	663
rpl22	gene	ribosomal-protein	−	83203	83659	456
rps19	gene	ribosomal-protein	−	83718	83997	279
rpl2	gene	ribosomal-protein	−	84051	85533	1482
rpl23	gene	ribosomal-protein	−	85551	85833	282
trnI-CAU	gene	translation-rna	−	85992	86066	74
ycf2	gene	other	+	86154	92955	6801
ycf15	gene	other	+	93096	93294	198
trnL-CAA	gene	translation-rna	−	93553	93634	81
ndhB	gene	nad-dehydrogenase	−	94176	96388	2212
rps7	gene	ribosomal-protein	−	96662	97130	468
trnV-GAC	gene	translation-rna	+	99545	99617	72
rrn16	gene	ribosomal-rna	+	99843	101334	1491
trnI-GAU	gene	translation-rna	+	101632	102652	1020
trnA-UGC	gene	translation-rna	+	102717	103603	886
rrn23	gene	ribosomal-rna	+	103765	106577	2812
rrn4.5	gene	ribosomal-rna	+	106675	106778	103
rrn5	gene	ribosomal-rna	+	107025	107146	121
trnR-ACG	gene	translation-rna	+	107380	107454	74
trnN-GUU	gene	translation-rna	+	108002	108074	72
ndhF	gene	nad-dehydrogenase	−	109130	111392	2262
rpl32	gene	ribosomal-protein	+	111719	111896	177
trnL-UAG	gene	translation-rna	+	112345	112425	80
ccsA	gene	other	+	112526	113510	984
ndhD	gene	nad-dehydrogenase	−	113766	115296	1530
psaC	gene	photosystem-i	−	115396	115642	246
ndhE	gene	nad-dehydrogenase	−	115897	116203	306
ndhG	gene	nad-dehydrogenase	−	116419	116950	531
ndhI	gene	nad-dehydrogenase	−	117315	117816	501
ndhA	gene	nad-dehydrogenase	−	117901	120023	2122
ndhH	gene	nad-dehydrogenase	−	120024	121206	1182
rps15	gene	ribosomal-protein	−	121302	121575	273
ycf1	gene	other	−	121767	127293	5526
trnN-GUU	gene	translation-rna	+	127622	127694	72
trnR-ACG	gene	translation-rna	−	128242	128316	74
rrn5	gene	ribosomal-rna	−	128550	128671	121
rrn4.5	gene	ribosomal-rna	−	128918	129021	103
rrn23	gene	ribosomal-rna	−	129119	131931	2812
trnA-UGC	gene	translation-rna	−	132093	132979	886
trnI-GAU	gene	translation-rna	−	133044	134064	1020
rrn16	gene	ribosomal-rna	−	134362	135853	1491
trnV-GAC	gene	translation-rna	−	136079	136151	72
rps7	gene	ribosomal-protein	+	138566	139034	468
ndhB	gene	nad-dehydrogenase	+	139308	141520	2212
trnL-CAA	gene	translation-rna	+	142062	142143	81
ycf15	gene	other	−	142402	142600	198
ycf2	gene	other	−	142741	149542	6801
trnI-CAU	gene	translation-rna	+	149630	149704	74
rpl23	gene	ribosomal-protein	+	149863	150145	282
rpl2	gene	ribosomal-protein	+	150163	151645	1482

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomeMW420945.1DNA · accDMW420945DNA · atpBMW420945DNA · matKMW420945DNA · ndhFMW420945DNA · psbAMW420945DNA · rbcLMW420945DNA · rps12MW420945DNA · ycf1MW420945