Coordinate-aware organelle record

Scutellaria litwinowii chloroplast genome

Available PQ059317.1 152,194 bp 133 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

133 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	3	77	74
psbA	gene	photosystem-ii	−	373	1432	1059
trnK-UUU	gene	translation-rna	−	1673	4256	2583
matK	gene	other	−	1963	3490	1527
rps16	gene	ribosomal-protein	−	5155	6313	1158
trnQ-UUG	gene	translation-rna	−	7441	7513	72
psbK	gene	photosystem-ii	+	7837	8023	186
psbI	gene	photosystem-ii	+	8401	8512	111
trnS-GCU	gene	translation-rna	−	8630	8718	88
trnG-UCC	gene	translation-rna	+	9422	10179	757
trnR-UCU	gene	translation-rna	+	10353	10425	72
atpA	gene	atp-synthase	−	10521	12045	1524
atpF	gene	atp-synthase	−	12126	13354	1228
atpH	gene	atp-synthase	−	13714	13960	246
atpI	gene	atp-synthase	−	14947	15691	744
rps2	gene	ribosomal-protein	−	16016	16727	711
rpoC2	gene	rna-polymerase	−	16941	21147	4206
rpoC1	gene	rna-polymerase	−	21301	24136	2835
rpoB	gene	rna-polymerase	−	24162	27375	3213
trnC-GCA	gene	translation-rna	+	28535	28606	71
petN	gene	cytochrome	+	29321	29411	90
psbM	gene	photosystem-ii	−	30467	30572	105
trnD-GUC	gene	translation-rna	−	31097	31171	74
trnY-GUA	gene	translation-rna	−	31284	31368	84
trnE-UUC	gene	translation-rna	−	31427	31500	73
trnT-GGU	gene	translation-rna	+	32075	32147	72
psbD	gene	photosystem-ii	+	33452	34514	1062
psbC	gene	photosystem-ii	+	34461	35883	1422
trnS-UGA	gene	translation-rna	−	36118	36210	92
psbZ	gene	photosystem-ii	+	36525	36714	189
trnG-GCC	gene	translation-rna	+	36990	37061	71
trnfM-CAU	gene	translation-rna	−	37210	37284	74
rps14	gene	ribosomal-protein	−	37438	37741	303
psaB	gene	photosystem-i	−	37869	40074	2205
psaA	gene	photosystem-i	−	40099	42352	2253
ycf3	gene	other	−	43047	44969	1922
trnS-GGA	gene	translation-rna	+	45857	45944	87
rps4	gene	ribosomal-protein	−	46219	46825	606
trnT-UGU	gene	translation-rna	−	47165	47238	73
trnL-UAA	gene	translation-rna	+	47922	48483	561
trnF-GAA	gene	translation-rna	+	48789	48862	73
ndhJ	gene	nad-dehydrogenase	−	49511	49988	477
ndhK	gene	nad-dehydrogenase	−	50096	50774	678
ndhC	gene	nad-dehydrogenase	−	50827	51190	363
trnV-UAC	gene	translation-rna	−	52175	52828	653
trnM-CAU	gene	translation-rna	+	53016	53089	73
atpE	gene	atp-synthase	−	53283	53685	402
atpB	gene	atp-synthase	−	53681	55178	1497
rbcL	gene	other	+	55929	57393	1464
accD	gene	other	+	58116	59595	1479
psaI	gene	photosystem-i	+	60299	60410	111
ycf4	gene	other	+	60864	61419	555
cemA	gene	other	+	62167	62767	600
petA	gene	cytochrome	+	62973	63936	963
psbJ	gene	photosystem-ii	−	64940	65063	123
psbL	gene	photosystem-ii	−	65196	65313	117
psbF	gene	photosystem-ii	−	65336	65456	120
psbE	gene	photosystem-ii	−	65470	65722	252
petL	gene	cytochrome	+	66597	66693	96
petG	gene	cytochrome	+	66867	66981	114
trnW-CCA	gene	translation-rna	−	67099	67173	74
trnP-UGG	gene	translation-rna	−	67342	67416	74
psaJ	gene	photosystem-i	+	67624	67822	198
rpl33	gene	ribosomal-protein	+	68300	68501	201
rps18	gene	ribosomal-protein	+	68675	68981	306
rpl20	gene	ribosomal-protein	−	69215	69602	387
rps12	gene	ribosomal-protein	−	70398	98451	28053
rps12	gene	ribosomal-protein	+	70398	138962	68564
clpP	gene	other	−	70653	72584	1931
psbB	gene	photosystem-ii	+	73042	74569	1527
psbT	gene	photosystem-ii	+	74759	74867	108
psbN	gene	photosystem-ii	−	74927	75059	132
psbH	gene	photosystem-ii	+	75162	75384	222
petB	gene	cytochrome	+	75508	76881	1373
petD	gene	cytochrome	+	77063	78269	1206
rpoA	gene	rna-polymerase	−	78623	79424	801
rps11	gene	ribosomal-protein	−	79495	79912	417
rpl36	gene	ribosomal-protein	−	80013	80127	114
infA	gene	other	−	80221	80455	234
rps8	gene	ribosomal-protein	−	80577	80988	411
rpl14	gene	ribosomal-protein	−	81139	81508	369
rpl16	gene	ribosomal-protein	−	81634	82861	1227
rps3	gene	ribosomal-protein	−	83016	83679	663
rpl22	gene	ribosomal-protein	−	83680	84136	456
rps19	gene	ribosomal-protein	−	84195	84474	279
rpl2	gene	ribosomal-protein	−	84528	86010	1482
rpl23	gene	ribosomal-protein	−	86028	86310	282
trnI-CAU	gene	translation-rna	−	86469	86543	74
ycf2	gene	other	+	86631	93432	6801
ycf15	gene	other	+	93573	93771	198
trnL-CAA	gene	translation-rna	−	94030	94111	81
ndhB	gene	nad-dehydrogenase	−	94653	96865	2212
rps7	gene	ribosomal-protein	−	97139	97607	468
trnV-GAC	gene	translation-rna	+	100022	100094	72
rrn16	gene	ribosomal-rna	+	100320	101811	1491
trnI-GAU	gene	translation-rna	+	102109	103130	1021
trnA-UGC	gene	translation-rna	+	103194	104083	889
rrn23	gene	ribosomal-rna	+	104252	107065	2813
rrn4.5	gene	ribosomal-rna	+	107163	107266	103
rrn5	gene	ribosomal-rna	+	107513	107634	121
trnR-ACG	gene	translation-rna	+	107868	107942	74
trnN-GUU	gene	translation-rna	−	108490	108562	72
ndhF	gene	nad-dehydrogenase	−	109618	111874	2256
rpl32	gene	ribosomal-protein	+	112201	112378	177
trnL-UAG	gene	translation-rna	+	112824	112904	80
ccsA	gene	other	+	113005	113980	975
ndhD	gene	nad-dehydrogenase	−	114218	115748	1530
psaC	gene	photosystem-i	−	115848	116094	246
ndhE	gene	nad-dehydrogenase	−	116342	116648	306
ndhG	gene	nad-dehydrogenase	−	116864	117395	531
ndhI	gene	nad-dehydrogenase	−	117761	118262	501
ndhA	gene	nad-dehydrogenase	−	118342	120464	2122
ndhH	gene	nad-dehydrogenase	−	120465	121647	1182
rps15	gene	ribosomal-protein	−	121743	122016	273
ycf1	gene	other	−	122211	127842	5631
trnN-GUU	gene	translation-rna	+	128060	128132	72
trnR-ACG	gene	translation-rna	−	128680	128754	74
rrn5	gene	ribosomal-rna	−	128988	129109	121
rrn4.5	gene	ribosomal-rna	−	129356	129459	103
rrn23	gene	ribosomal-rna	−	129557	132370	2813
trnA-UGC	gene	translation-rna	−	132539	133428	889
trnI-GAU	gene	translation-rna	−	133492	134513	1021
ycf68	gene	other	−	134064	134358	294
rrn16	gene	ribosomal-rna	−	134811	136302	1491
trnV-GAC	gene	translation-rna	−	136528	136600	72
rps7	gene	ribosomal-protein	+	139015	139483	468
ndhB	gene	nad-dehydrogenase	+	139757	141969	2212
trnL-CAA	gene	translation-rna	+	142511	142592	81
ycf15	gene	other	−	142851	143049	198
ycf2	gene	other	−	143190	149991	6801
trnI-CAU	gene	translation-rna	+	150079	150153	74
rpl23	gene	ribosomal-protein	+	150312	150594	282
rpl2	gene	ribosomal-protein	+	150612	152094	1482

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomePQ059317.1DNA · accDPQ059317DNA · atpBPQ059317DNA · matKPQ059317DNA · ndhFPQ059317DNA · psbAPQ059317DNA · rbcLPQ059317DNA · rps12PQ059317DNA · ycf1PQ059317