Coordinate-aware organelle record

Scutellaria macrosiphon chloroplast genome

Available PQ059318.1 152,049 bp 133 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

133 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	2	76	74
psbA	gene	photosystem-ii	−	364	1423	1059
trnK-UUU	gene	translation-rna	−	1664	4253	2589
matK	gene	other	−	1959	3495	1536
rps16	gene	ribosomal-protein	−	5104	6295	1191
trnQ-UUG	gene	translation-rna	−	7314	7386	72
psbK	gene	photosystem-ii	+	7710	7896	186
psbI	gene	photosystem-ii	+	8293	8404	111
trnS-GCU	gene	translation-rna	−	8522	8610	88
trnG-UCC	gene	translation-rna	+	9292	10053	761
trnR-UCU	gene	translation-rna	+	10223	10295	72
atpA	gene	atp-synthase	−	10391	11915	1524
atpF	gene	atp-synthase	−	11997	13225	1228
atpH	gene	atp-synthase	−	13580	13826	246
atpI	gene	atp-synthase	−	14821	15565	744
rps2	gene	ribosomal-protein	−	15912	16623	711
rpoC2	gene	rna-polymerase	−	16839	21045	4206
rpoC1	gene	rna-polymerase	−	21199	24019	2820
rpoB	gene	rna-polymerase	−	24045	27258	3213
trnC-GCA	gene	translation-rna	+	28416	28487	71
petN	gene	cytochrome	+	29198	29288	90
psbM	gene	photosystem-ii	−	30280	30385	105
trnD-GUC	gene	translation-rna	−	30911	30985	74
trnY-GUA	gene	translation-rna	−	31098	31182	84
trnE-UUC	gene	translation-rna	−	31241	31314	73
trnT-GGU	gene	translation-rna	+	31889	31961	72
psbD	gene	photosystem-ii	+	33268	34330	1062
psbC	gene	photosystem-ii	+	34277	35699	1422
trnS-UGA	gene	translation-rna	−	35933	36025	92
psbZ	gene	photosystem-ii	+	36344	36533	189
trnG-GCC	gene	translation-rna	+	36804	36875	71
trnfM-CAU	gene	translation-rna	−	37028	37102	74
rps14	gene	ribosomal-protein	−	37251	37554	303
psaB	gene	photosystem-i	−	37681	39886	2205
psaA	gene	photosystem-i	−	39911	42164	2253
ycf3	gene	other	−	42832	44757	1925
trnS-GGA	gene	translation-rna	+	45636	45723	87
rps4	gene	ribosomal-protein	−	46008	46614	606
trnT-UGU	gene	translation-rna	−	46943	47016	73
trnL-UAA	gene	translation-rna	+	47701	48262	561
trnF-GAA	gene	translation-rna	+	48568	48641	73
ndhJ	gene	nad-dehydrogenase	−	49289	49766	477
ndhK	gene	nad-dehydrogenase	−	49873	50551	678
ndhC	gene	nad-dehydrogenase	−	50603	50966	363
trnV-UAC	gene	translation-rna	−	51821	52474	653
trnM-CAU	gene	translation-rna	+	52654	52727	73
atpE	gene	atp-synthase	−	52942	53344	402
atpB	gene	atp-synthase	−	53340	54828	1488
rbcL	gene	other	+	55568	57032	1464
accD	gene	other	+	57758	59225	1467
psaI	gene	photosystem-i	+	59782	59893	111
ycf4	gene	other	+	60326	60881	555
cemA	gene	other	+	61618	62218	600
petA	gene	cytochrome	+	62424	63387	963
psbJ	gene	photosystem-ii	−	64412	64535	123
psbL	gene	photosystem-ii	−	64668	64890	222
psbF	gene	photosystem-ii	−	64808	64928	120
psbE	gene	photosystem-ii	−	64942	65194	252
petL	gene	cytochrome	+	66102	66198	96
petG	gene	cytochrome	+	66373	66487	114
trnW-CCA	gene	translation-rna	−	66605	66679	74
trnP-UGG	gene	translation-rna	−	66848	66922	74
psaJ	gene	photosystem-i	+	67194	67329	135
rpl33	gene	ribosomal-protein	+	67802	68003	201
rps18	gene	ribosomal-protein	+	68177	68483	306
rpl20	gene	ribosomal-protein	−	68720	69107	387
rps12	gene	ribosomal-protein	−	69906	98027	28121
rps12	gene	ribosomal-protein	+	69906	138816	68910
clpP	gene	other	−	70162	72096	1934
psbB	gene	photosystem-ii	+	72564	74091	1527
psbT	gene	photosystem-ii	+	74282	74384	102
psbN	gene	photosystem-ii	−	74457	74589	132
psbH	gene	photosystem-ii	+	74692	74914	222
petB	gene	cytochrome	+	75038	76406	1368
petD	gene	cytochrome	+	76594	77796	1202
rpoA	gene	rna-polymerase	−	78170	78971	801
rps11	gene	ribosomal-protein	−	79042	79459	417
rpl36	gene	ribosomal-protein	−	79560	79674	114
infA	gene	other	−	79769	80003	234
rps8	gene	ribosomal-protein	−	80122	80533	411
rpl14	gene	ribosomal-protein	−	80703	81072	369
rpl16	gene	ribosomal-protein	−	81198	82432	1234
rps3	gene	ribosomal-protein	−	82586	83249	663
rpl22	gene	ribosomal-protein	−	83250	83706	456
rps19	gene	ribosomal-protein	−	83765	84044	279
rpl2	gene	ribosomal-protein	−	84098	85581	1483
rpl23	gene	ribosomal-protein	−	85599	85881	282
trnI-CAU	gene	translation-rna	−	86040	86114	74
ycf2	gene	other	+	86202	93012	6810
ycf15	gene	other	+	93153	93351	198
trnL-CAA	gene	translation-rna	−	93606	93687	81
ndhB	gene	nad-dehydrogenase	−	94229	96387	2158
rps7	gene	ribosomal-protein	−	96715	97183	468
trnV-GAC	gene	translation-rna	+	99604	99676	72
rrn16	gene	ribosomal-rna	+	99903	101394	1491
trnI-GAU	gene	translation-rna	+	101692	102713	1021
trnA-UGC	gene	translation-rna	+	102777	103660	883
rrn23	gene	ribosomal-rna	+	103829	106642	2813
rrn4.5	gene	ribosomal-rna	+	106740	106843	103
rrn5	gene	ribosomal-rna	+	107090	107211	121
trnR-ACG	gene	translation-rna	+	107445	107519	74
trnN-GUU	gene	translation-rna	−	108065	108137	72
ndhF	gene	nad-dehydrogenase	−	109213	111454	2241
rpl32	gene	ribosomal-protein	+	111974	112151	177
trnL-UAG	gene	translation-rna	+	112595	112675	80
ccsA	gene	other	+	112771	113746	975
ndhD	gene	nad-dehydrogenase	−	113978	115502	1524
psaC	gene	photosystem-i	−	115600	115846	246
ndhE	gene	nad-dehydrogenase	−	116102	116408	306
ndhG	gene	nad-dehydrogenase	−	116638	117169	531
ndhI	gene	nad-dehydrogenase	−	117533	118034	501
ndhA	gene	nad-dehydrogenase	−	118127	120227	2100
ndhH	gene	nad-dehydrogenase	−	120228	121440	1212
rps15	gene	ribosomal-protein	−	121512	121785	273
ycf1	gene	other	−	122051	127697	5646
trnN-GUU	gene	translation-rna	+	127915	127987	72
trnR-ACG	gene	translation-rna	−	128533	128607	74
rrn5	gene	ribosomal-rna	−	128841	128962	121
rrn4.5	gene	ribosomal-rna	−	129209	129312	103
rrn23	gene	ribosomal-rna	−	129410	132223	2813
trnA-UGC	gene	translation-rna	−	132392	133275	883
trnI-GAU	gene	translation-rna	−	133339	134360	1021
ycf68	gene	other	−	133965	134205	240
rrn16	gene	ribosomal-rna	−	134658	136149	1491
trnV-GAC	gene	translation-rna	−	136376	136448	72
rps7	gene	ribosomal-protein	+	138869	139337	468
ndhB	gene	nad-dehydrogenase	+	139665	141823	2158
trnL-CAA	gene	translation-rna	+	142365	142446	81
ycf15	gene	other	−	142701	142899	198
ycf2	gene	other	−	143040	149850	6810
trnI-CAU	gene	translation-rna	+	149938	150012	74
rpl23	gene	ribosomal-protein	+	150171	150453	282
rpl2	gene	ribosomal-protein	+	150471	151954	1483

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomePQ059318.1DNA · accDPQ059318DNA · atpBPQ059318DNA · matKPQ059318DNA · ndhFPQ059318DNA · psbAPQ059318DNA · rbcLPQ059318DNA · rps12PQ059318DNA · ycf1PQ059318