Scutellaria meehanioides chloroplast
Biopython GenomeDiagram 1.79; GenBank local location segments.
IR
IR
trnH-GUG · NC_057189.1 · 159–232 bp · −
psbA · NC_057189.1 · 525–1,583 bp · −
trnK-UUU · NC_057189.1 · 1,825–4,413 bp · −
matK · NC_057189.1 · 2,120–3,655 bp · −
rps16 · NC_057189.1 · 4,933–6,101 bp · −
trnQ-UUG · NC_057189.1 · 6,938–7,009 bp · −
trnS-GCU; trnS-GGA · NC_057189.1 · 8,275–8,362 bp · −
atpA · NC_057189.1 · 10,135–11,658 bp · −
atpF · NC_057189.1 · 11,741–12,968 bp · −
atpH · NC_057189.1 · 13,334–13,579 bp · −
atpI · NC_057189.1 · 14,575–15,318 bp · −
rps2 · NC_057189.1 · 15,546–16,256 bp · −
rpoC2 · NC_057189.1 · 16,473–20,678 bp · −
rpoC1 · NC_057189.1 · 20,833–23,684 bp · −
rpoB · NC_057189.1 · 23,690–26,902 bp · −
psbM · NC_057189.1 · 29,430–29,534 bp · −
trnD-GUC · NC_057189.1 · 30,061–30,134 bp · −
trnY-GUA · NC_057189.1 · 30,248–30,331 bp · −
trnS-UGA · NC_057189.1 · 35,217–35,307 bp · −
trnfM-CAU · NC_057189.1 · 36,349–36,422 bp · −
rps14 · NC_057189.1 · 36,572–36,874 bp · −
psaB · NC_057189.1 · 37,002–39,206 bp · −
psaA · NC_057189.1 · 39,232–41,484 bp · −
ycf3 · NC_057189.1 · 42,285–44,207 bp · −
rps4 · NC_057189.1 · 45,431–46,036 bp · −
trnT-UGU · NC_057189.1 · 46,432–46,504 bp · −
ndhJ · NC_057189.1 · 48,662–49,138 bp · −
ndhK · NC_057189.1 · 49,246–49,923 bp · −
ndhC · NC_057189.1 · 49,976–50,338 bp · −
trnV-UAC · NC_057189.1 · 51,340–51,992 bp · −
atpE · NC_057189.1 · 52,461–52,862 bp · −
atpB · NC_057189.1 · 52,859–54,346 bp · −
psbJ · NC_057189.1 · 63,794–63,916 bp · −
psbL · NC_057189.1 · 64,050–64,166 bp · −
psbF · NC_057189.1 · 64,190–64,309 bp · −
psbE · NC_057189.1 · 64,324–64,575 bp · −
trnW-CCA · NC_057189.1 · 65,880–65,953 bp · −
trnP-UGG · NC_057189.1 · 66,123–66,196 bp · −
rpl20 · NC_057189.1 · 68,045–68,431 bp · −
rps12 · NC_057189.1 · 69,222–69,347 bp · −
rps12 · NC_057189.1 · 96,677–97,467 bp · −
clpP · NC_057189.1 · 69,490–71,423 bp · −
psbN · NC_057189.1 · 73,788–73,919 bp · −
rpoA · NC_057189.1 · 77,242–78,255 bp · −
rps11 · NC_057189.1 · 78,327–78,743 bp · −
rpl36 · NC_057189.1 · 78,845–78,958 bp · −
infA · NC_057189.1 · 79,054–79,287 bp · −
rps8 · NC_057189.1 · 79,408–79,818 bp · −
rpl14 · NC_057189.1 · 79,989–80,357 bp · −
rps3 · NC_057189.1 · 81,918–82,580 bp · −
rpl22 · NC_057189.1 · 82,582–83,037 bp · −
rps19 · NC_057189.1 · 83,097–83,432 bp · −
rpl2 · NC_057189.1 · 83,487–84,969 bp · −
rpl23 · NC_057189.1 · 84,988–85,269 bp · −
trnI-CAU · NC_057189.1 · 85,429–85,502 bp · −
trnL-CAA · NC_057189.1 · 93,047–93,127 bp · −
ndhB · NC_057189.1 · 93,670–95,881 bp · −
rps7 · NC_057189.1 · 96,156–96,623 bp · −
trnN-GUU · NC_057189.1 · 107,541–107,612 bp · −
ndhF · NC_057189.1 · 108,956–111,166 bp · −
ndhD · NC_057189.1 · 113,833–115,377 bp · −
psaC · NC_057189.1 · 115,455–115,700 bp · −
ndhE · NC_057189.1 · 115,957–116,262 bp · −
ndhG · NC_057189.1 · 116,493–117,023 bp · −
ndhI · NC_057189.1 · 117,388–117,888 bp · −
ndhA · NC_057189.1 · 117,969–120,068 bp · −
ndhH · NC_057189.1 · 120,070–121,251 bp · −
rps15 · NC_057189.1 · 121,354–121,626 bp · −
ycf1 · NC_057189.1 · 121,959–127,511 bp · −
trnR-ACG · NC_057189.1 · 128,449–128,522 bp · −
rrn5 · NC_057189.1 · 128,757–128,877 bp · −
rrn4.5 · NC_057189.1 · 129,125–129,227 bp · −
rrn23 · NC_057189.1 · 129,326–132,138 bp · −
trnA-UGC · NC_057189.1 · 132,308–133,187 bp · −
trnI-GAU · NC_057189.1 · 133,252–134,272 bp · −
rrn16 · NC_057189.1 · 134,571–136,061 bp · −
trnV-GAC · NC_057189.1 · 136,289–136,360 bp · −
ycf15 · NC_057189.1 · 142,641–142,889 bp · −
ycf2 · NC_057189.1 · 142,972–149,841 bp · −
trnH-GUG · NC_057189.1 · 152,090–152,163 bp · −
trnH-GUG · NC_057189.1 · 152,091–152,164 bp · −
psbK · NC_057189.1 · 7,397–7,582 bp · +
psbI · NC_057189.1 · 7,974–8,084 bp · +
trnG-UCC · NC_057189.1 · 8,999–9,759 bp · +
trnR-UCU · NC_057189.1 · 9,967–10,038 bp · +
trnC-GCA · NC_057189.1 · 28,070–28,140 bp · +
petN · NC_057189.1 · 28,347–28,436 bp · +
trnT-GGU · NC_057189.1 · 31,039–31,110 bp · +
psbD · NC_057189.1 · 32,551–33,612 bp · +
psbC · NC_057189.1 · 33,560–34,981 bp · +
psbZ · NC_057189.1 · 35,628–35,816 bp · +
trnG-GCC · NC_057189.1 · 36,088–36,158 bp · +
trnS-GGA; trnS-GCU · NC_057189.1 · 45,059–45,145 bp · +
trnL-UAA · NC_057189.1 · 47,189–47,749 bp · +
trnF-GAA · NC_057189.1 · 48,056–48,128 bp · +
trnM-CAU · NC_057189.1 · 52,173–52,245 bp · +
rbcL · NC_057189.1 · 55,119–56,558 bp · +
accD · NC_057189.1 · 57,295–58,761 bp · +
psaI · NC_057189.1 · 59,230–59,340 bp · +
ycf4 · NC_057189.1 · 59,774–60,328 bp · +
cemA · NC_057189.1 · 60,862–61,557 bp · +
petA · NC_057189.1 · 61,764–62,726 bp · +
petL · NC_057189.1 · 65,377–65,472 bp · +
petG · NC_057189.1 · 65,648–65,761 bp · +
psaJ · NC_057189.1 · 66,520–66,654 bp · +
rpl33 · NC_057189.1 · 67,128–67,328 bp · +
rps18 · NC_057189.1 · 67,503–67,808 bp · +
rps12 · NC_057189.1 · 137,965–138,755 bp · +
psbB · NC_057189.1 · 71,895–73,421 bp · +
psbT · NC_057189.1 · 73,613–73,714 bp · +
psbH · NC_057189.1 · 74,023–74,244 bp · +
petB · NC_057189.1 · 74,369–75,736 bp · +
petD · NC_057189.1 · 75,925–77,079 bp · +
ycf2 · NC_057189.1 · 85,591–92,460 bp · +
ycf15 · NC_057189.1 · 92,543–92,791 bp · +
trnV-GAC · NC_057189.1 · 99,073–99,144 bp · +
rrn16 · NC_057189.1 · 99,372–100,862 bp · +
trnI-GAU · NC_057189.1 · 101,161–102,181 bp · +
trnA-UGC · NC_057189.1 · 102,246–103,125 bp · +
rrn23 · NC_057189.1 · 103,295–106,107 bp · +
rrn4.5 · NC_057189.1 · 106,206–106,308 bp · +
rrn5 · NC_057189.1 · 106,556–106,676 bp · +
trnR-ACG · NC_057189.1 · 106,911–106,984 bp · +
rpl32 · NC_057189.1 · 111,634–111,810 bp · +
trnL-UAG · NC_057189.1 · 112,434–112,513 bp · +
ccsA · NC_057189.1 · 112,610–113,584 bp · +
trnN-GUU · NC_057189.1 · 127,841–127,912 bp · +
rps7 · NC_057189.1 · 138,809–139,276 bp · +
ndhB · NC_057189.1 · 139,551–141,762 bp · +
trnL-CAA · NC_057189.1 · 142,305–142,385 bp · +
trnI-CAU · NC_057189.1 · 149,930–150,003 bp · +
rpl23 · NC_057189.1 · 150,163–150,444 bp · +
rpl2 · NC_057189.1 · 150,463–151,945 bp · +
0 kb
13 kb
26 kb
39 kb
52 kb
65 kb
78 kb
91 kb
104 kb
117 kb
130 kb
143 kb
Scutellaria meehanioides
ANNOTATED PLASTOME
NC_057189.1
152,484 bp · 132 genes
Gene function
Transfer RNA
Photosystem II
Other
Ribosomal protein
ATP synthase
RNA polymerase
Cytochrome
Photosystem I
NADH dehydrogenase
Ribosomal RNA
0 38121 76242 114363 152484 bp
Forward strand 5′ → 3′
psbK psbI trnG-UCC trnR-UCU trnC-GCA petN trnT-GGU psbD psbC psbZ trnG-GCC trnS-GGA; trnS-GCU trnL-UAA trnF-GAA trnM-CAU rbcL accD psaI ycf4 cemA petA petL petG psaJ rpl33 rps18 psbB psbT psbH petB petD ycf2 ycf15 trnV-GAC rrn16 trnI-GAU trnA-UGC rrn23 rrn4.5 rrn5 trnR-ACG rpl32 trnL-UAG ccsA trnN-GUU rps12 rps7 ndhB trnL-CAA trnI-CAU rpl23 rpl2
trnH-GUG psbA trnK-UUU matK rps16 trnQ-UUG trnS-GCU; trnS-GGA atpA atpF atpH atpI rps2 rpoC2 rpoC1 rpoB psbM trnD-GUC trnY-GUA trnS-UGA trnfM-CAU rps14 psaB psaA ycf3 rps4 trnT-UGU ndhJ ndhK ndhC trnV-UAC atpE atpB psbJ psbL psbF psbE trnW-CCA trnP-UGG rpl20 rps12 clpP psbN rpoA rps11 rpl36 infA rps8 rpl14 rps3 rpl22 rps19 rpl2 rpl23 trnI-CAU trnL-CAA ndhB rps7 rps12 trnN-GUU ndhF ndhD psaC ndhE ndhG ndhI ndhA ndhH rps15 ycf1 trnR-ACG rrn5 rrn4.5 rrn23 trnA-UGC trnI-GAU rrn16 trnV-GAC ycf15 ycf2 trnH-GUG trnH-GUG
Reverse strand 3′ ← 5′
Outer ring: forward strand; inner ring: reverse strand. The innermost ring shows overall GC percentage. GenBank gene locations may include introns; discontinuous parts are drawn separately. Hover for coordinates; click a segment to open its gene page. Biopython GenomeDiagram .
Gene-position browser Map and table selections are linked. Each row is one local segment; coordinates are 1-based and inclusive.
133 local segments
Gene Type Group Strand Start End Length
trnH-GUG gene − 159 232 74 Locate
psbA gene − 525 1583 1059 Locate
trnK-UUU gene − 1825 4413 2589 Locate
matK gene − 2120 3655 1536 Locate
rps16 gene − 4933 6101 1169 Locate
trnQ-UUG gene − 6938 7009 72 Locate
psbK gene + 7397 7582 186 Locate
psbI gene + 7974 8084 111 Locate
trnS-GCU; trnS-GGA gene − 8275 8362 88 Locate
trnG-UCC gene + 8999 9759 761 Locate
trnR-UCU gene + 9967 10038 72 Locate
atpA gene − 10135 11658 1524 Locate
atpF gene − 11741 12968 1228 Locate
atpH gene − 13334 13579 246 Locate
atpI gene − 14575 15318 744 Locate
rps2 gene − 15546 16256 711 Locate
rpoC2 gene − 16473 20678 4206 Locate
rpoC1 gene − 20833 23684 2852 Locate
rpoB gene − 23690 26902 3213 Locate
trnC-GCA gene + 28070 28140 71 Locate
petN gene + 28347 28436 90 Locate
psbM gene − 29430 29534 105 Locate
trnD-GUC gene − 30061 30134 74 Locate
trnY-GUA gene − 30248 30331 84 Locate
trnT-GGU gene + 31039 31110 72 Locate
psbD gene + 32551 33612 1062 Locate
psbC gene + 33560 34981 1422 Locate
trnS-UGA gene − 35217 35307 91 Locate
psbZ gene + 35628 35816 189 Locate
trnG-GCC gene + 36088 36158 71 Locate
trnfM-CAU gene − 36349 36422 74 Locate
rps14 gene − 36572 36874 303 Locate
psaB gene − 37002 39206 2205 Locate
psaA gene − 39232 41484 2253 Locate
ycf3 gene − 42285 44207 1923 Locate
trnS-GGA; trnS-GCU gene + 45059 45145 87 Locate
rps4 gene − 45431 46036 606 Locate
trnT-UGU gene − 46432 46504 73 Locate
trnL-UAA gene + 47189 47749 561 Locate
trnF-GAA gene + 48056 48128 73 Locate
ndhJ gene − 48662 49138 477 Locate
ndhK gene − 49246 49923 678 Locate
ndhC gene − 49976 50338 363 Locate
trnV-UAC gene − 51340 51992 653 Locate
trnM-CAU gene + 52173 52245 73 Locate
atpE gene − 52461 52862 402 Locate
atpB gene − 52859 54346 1488 Locate
rbcL gene + 55119 56558 1440 Locate
accD gene + 57295 58761 1467 Locate
psaI gene + 59230 59340 111 Locate
ycf4 gene + 59774 60328 555 Locate
cemA gene + 60862 61557 696 Locate
petA gene + 61764 62726 963 Locate
psbJ gene − 63794 63916 123 Locate
psbL gene − 64050 64166 117 Locate
psbF gene − 64190 64309 120 Locate
psbE gene − 64324 64575 252 Locate
petL gene + 65377 65472 96 Locate
petG gene + 65648 65761 114 Locate
trnW-CCA gene − 65880 65953 74 Locate
trnP-UGG gene − 66123 66196 74 Locate
psaJ gene + 66520 66654 135 Locate
rpl33 gene + 67128 67328 201 Locate
rps18 gene + 67503 67808 306 Locate
rpl20 gene − 68045 68431 387 Locate
rps12 gene − 69222 69347 126 Locate
clpP gene − 69490 71423 1934 Locate
psbB gene + 71895 73421 1527 Locate
psbT gene + 73613 73714 102 Locate
psbN gene − 73788 73919 132 Locate
psbH gene + 74023 74244 222 Locate
petB gene + 74369 75736 1368 Locate
petD gene + 75925 77079 1155 Locate
rpoA gene − 77242 78255 1014 Locate
rps11 gene − 78327 78743 417 Locate
rpl36 gene − 78845 78958 114 Locate
infA gene − 79054 79287 234 Locate
rps8 gene − 79408 79818 411 Locate
rpl14 gene − 79989 80357 369 Locate
rps3 gene − 81918 82580 663 Locate
rpl22 gene − 82582 83037 456 Locate
rps19 gene − 83097 83432 336 Locate
rpl2 gene − 83487 84969 1483 Locate
rpl23 gene − 84988 85269 282 Locate
trnI-CAU gene − 85429 85502 74 Locate
ycf2 gene + 85591 92460 6870 Locate
ycf15 gene + 92543 92791 249 Locate
trnL-CAA gene − 93047 93127 81 Locate
ndhB gene − 93670 95881 2212 Locate
rps7 gene − 96156 96623 468 Locate
rps12 gene − 96677 97467 791 Locate
trnV-GAC gene + 99073 99144 72 Locate
rrn16 gene + 99372 100862 1491 Locate
trnI-GAU gene + 101161 102181 1021 Locate
trnA-UGC gene + 102246 103125 880 Locate
rrn23 gene + 103295 106107 2813 Locate
rrn4.5 gene + 106206 106308 103 Locate
rrn5 gene + 106556 106676 121 Locate
trnR-ACG gene + 106911 106984 74 Locate
trnN-GUU gene − 107541 107612 72 Locate
ndhF gene − 108956 111166 2211 Locate
rpl32 gene + 111634 111810 177 Locate
trnL-UAG gene + 112434 112513 80 Locate
ccsA gene + 112610 113584 975 Locate
ndhD gene − 113833 115377 1545 Locate
psaC gene − 115455 115700 246 Locate
ndhE gene − 115957 116262 306 Locate
ndhG gene − 116493 117023 531 Locate
ndhI gene − 117388 117888 501 Locate
ndhA gene − 117969 120068 2100 Locate
ndhH gene − 120070 121251 1182 Locate
rps15 gene − 121354 121626 273 Locate
ycf1 gene − 121959 127511 5553 Locate
trnN-GUU gene + 127841 127912 72 Locate
trnR-ACG gene − 128449 128522 74 Locate
rrn5 gene − 128757 128877 121 Locate
rrn4.5 gene − 129125 129227 103 Locate
rrn23 gene − 129326 132138 2813 Locate
trnA-UGC gene − 132308 133187 880 Locate
trnI-GAU gene − 133252 134272 1021 Locate
rrn16 gene − 134571 136061 1491 Locate
trnV-GAC gene − 136289 136360 72 Locate
rps12 gene + 137965 138755 791 Locate
rps7 gene + 138809 139276 468 Locate
ndhB gene + 139551 141762 2212 Locate
trnL-CAA gene + 142305 142385 81 Locate
ycf15 gene − 142641 142889 249 Locate
ycf2 gene − 142972 149841 6870 Locate
trnI-CAU gene + 149930 150003 74 Locate
rpl23 gene + 150163 150444 282 Locate
rpl2 gene + 150463 151945 1483 Locate
trnH-GUG gene − 152090 152163 74 Locate
trnH-GUG gene − 152091 152164 74 Locate
Status Available
Accession NC_057189.1
Length 152,484 bp
GC content 38.4%
Annotated genes 132
Gene sequence records 8
Translation Rna 38 Photosystem Ii 15 Other 14 Ribosomal Protein 25 Atp Synthase 6 Rna Polymerase 4 Cytochrome 6 Photosystem I 5 Nad Dehydrogenase 12 Ribosomal Rna 8
SSR 0
Direct 0
Inverted 2
Palindromic 0
Sources and evidence boundary Accessions, release scope and coordinate evidence remain visible beside the visualization.
Full species sources