Coordinate-aware organelle record

Scutellaria mesostegia chloroplast genome

Available PQ075922.1 151,839 bp 133 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

133 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	3	77	74
psbA	gene	photosystem-ii	−	373	1432	1059
trnK-UUU	gene	translation-rna	−	1673	4255	2582
matK	gene	other	−	1963	3490	1527
rps16	gene	ribosomal-protein	−	5156	6317	1161
trnQ-UUG	gene	translation-rna	−	7060	7132	72
psbK	gene	photosystem-ii	+	7456	7642	186
psbI	gene	photosystem-ii	+	8031	8142	111
trnS-GCU	gene	translation-rna	−	8259	8347	88
trnG-UCC	gene	translation-rna	+	9049	9806	757
trnR-UCU	gene	translation-rna	+	9971	10043	72
atpA	gene	atp-synthase	−	10139	11663	1524
atpF	gene	atp-synthase	−	11744	12973	1229
atpH	gene	atp-synthase	−	13336	13582	246
atpI	gene	atp-synthase	−	14569	15313	744
rps2	gene	ribosomal-protein	−	15658	16369	711
rpoC2	gene	rna-polymerase	−	16583	20789	4206
rpoC1	gene	rna-polymerase	−	20943	23780	2837
rpoB	gene	rna-polymerase	−	23806	27019	3213
trnC-GCA	gene	translation-rna	+	28179	28250	71
petN	gene	cytochrome	+	28965	29055	90
psbM	gene	photosystem-ii	−	30136	30241	105
trnD-GUC	gene	translation-rna	−	30766	30840	74
trnY-GUA	gene	translation-rna	−	30953	31037	84
trnE-UUC	gene	translation-rna	−	31096	31169	73
trnT-GGU	gene	translation-rna	+	31744	31816	72
psbD	gene	photosystem-ii	+	33121	34183	1062
psbC	gene	photosystem-ii	+	34130	35552	1422
trnS-UGA	gene	translation-rna	−	35787	35879	92
psbZ	gene	photosystem-ii	+	36194	36383	189
trnG-GCC	gene	translation-rna	+	36662	36733	71
trnfM-CAU	gene	translation-rna	−	36878	36952	74
rps14	gene	ribosomal-protein	−	37106	37409	303
psaB	gene	photosystem-i	−	37538	39743	2205
psaA	gene	photosystem-i	−	39768	42021	2253
ycf3	gene	other	−	42713	44636	1923
trnS-GGA	gene	translation-rna	+	45518	45605	87
rps4	gene	ribosomal-protein	−	45880	46486	606
trnT-UGU	gene	translation-rna	−	46825	46898	73
trnL-UAA	gene	translation-rna	+	47571	48130	559
trnF-GAA	gene	translation-rna	+	48432	48505	73
ndhJ	gene	nad-dehydrogenase	−	49153	49630	477
ndhK	gene	nad-dehydrogenase	−	49738	50500	762
ndhC	gene	nad-dehydrogenase	−	50469	50832	363
trnV-UAC	gene	translation-rna	−	51817	52470	653
trnM-CAU	gene	translation-rna	+	52658	52731	73
atpE	gene	atp-synthase	−	52924	53326	402
atpB	gene	atp-synthase	−	53322	54819	1497
rbcL	gene	other	+	55569	57033	1464
accD	gene	other	+	57746	59225	1479
psaI	gene	photosystem-i	+	59931	60042	111
ycf4	gene	other	+	60475	61030	555
cemA	gene	other	+	61778	62378	600
petA	gene	cytochrome	+	62584	63547	963
psbJ	gene	photosystem-ii	−	64554	64677	123
psbL	gene	photosystem-ii	−	64810	65032	222
psbF	gene	photosystem-ii	−	64950	65070	120
psbE	gene	photosystem-ii	−	65084	65336	252
petL	gene	cytochrome	+	66213	66309	96
petG	gene	cytochrome	+	66484	66598	114
trnW-CCA	gene	translation-rna	−	66715	66789	74
trnP-UGG	gene	translation-rna	−	66958	67032	74
psaJ	gene	photosystem-i	+	67303	67438	135
rpl33	gene	ribosomal-protein	+	67913	68114	201
rps18	gene	ribosomal-protein	+	68288	68594	306
rpl20	gene	ribosomal-protein	−	68830	69217	387
rps12	gene	ribosomal-protein	−	69999	98063	28064
rps12	gene	ribosomal-protein	+	69999	138607	68608
clpP	gene	other	−	70266	72195	1929
psbB	gene	photosystem-ii	+	72646	74173	1527
psbT	gene	photosystem-ii	+	74364	74472	108
psbN	gene	photosystem-ii	−	74532	74664	132
psbH	gene	photosystem-ii	+	74767	74989	222
petB	gene	cytochrome	+	75113	76482	1369
petD	gene	cytochrome	+	76664	77871	1207
rpoA	gene	rna-polymerase	−	78225	79026	801
rps11	gene	ribosomal-protein	−	79097	79514	417
rpl36	gene	ribosomal-protein	−	79615	79729	114
infA	gene	other	−	79823	80057	234
rps8	gene	ribosomal-protein	−	80180	80591	411
rpl14	gene	ribosomal-protein	−	80744	81113	369
rpl16	gene	ribosomal-protein	−	81239	82473	1234
rps3	gene	ribosomal-protein	−	82628	83291	663
rpl22	gene	ribosomal-protein	−	83292	83748	456
rps19	gene	ribosomal-protein	−	83807	84086	279
rpl2	gene	ribosomal-protein	−	84140	85622	1482
rpl23	gene	ribosomal-protein	−	85640	85922	282
trnI-CAU	gene	translation-rna	−	86081	86155	74
ycf2	gene	other	+	86243	93044	6801
ycf15	gene	other	+	93185	93383	198
trnL-CAA	gene	translation-rna	−	93642	93723	81
ndhB	gene	nad-dehydrogenase	−	94265	96423	2158
rps7	gene	ribosomal-protein	−	96751	97219	468
trnV-GAC	gene	translation-rna	+	99634	99706	72
rrn16	gene	ribosomal-rna	+	99932	101423	1491
trnI-GAU	gene	translation-rna	+	101721	102742	1021
trnA-UGC	gene	translation-rna	+	102806	103693	887
rrn23	gene	ribosomal-rna	+	103862	106674	2812
rrn4.5	gene	ribosomal-rna	+	106772	106875	103
rrn5	gene	ribosomal-rna	+	107122	107243	121
trnR-ACG	gene	translation-rna	+	107477	107551	74
trnN-GUU	gene	translation-rna	−	108099	108171	72
ndhF	gene	nad-dehydrogenase	−	109227	111489	2262
rpl32	gene	ribosomal-protein	+	111816	111993	177
trnL-UAG	gene	translation-rna	+	112439	112519	80
ccsA	gene	other	+	112620	113595	975
ndhD	gene	nad-dehydrogenase	−	113851	115354	1503
psaC	gene	photosystem-i	−	115480	115726	246
ndhE	gene	nad-dehydrogenase	−	115981	116287	306
ndhG	gene	nad-dehydrogenase	−	116503	117034	531
ndhI	gene	nad-dehydrogenase	−	117400	117901	501
ndhA	gene	nad-dehydrogenase	−	117986	120108	2122
ndhH	gene	nad-dehydrogenase	−	120109	121291	1182
rps15	gene	ribosomal-protein	−	121387	121660	273
ycf1	gene	other	−	121853	127490	5637
trnN-GUU	gene	translation-rna	+	127708	127780	72
trnR-ACG	gene	translation-rna	−	128328	128402	74
rrn5	gene	ribosomal-rna	−	128636	128757	121
rrn4.5	gene	ribosomal-rna	−	129004	129107	103
rrn23	gene	ribosomal-rna	−	129205	132017	2812
trnA-UGC	gene	translation-rna	−	132186	133073	887
trnI-GAU	gene	translation-rna	−	133137	134158	1021
ycf68	gene	other	−	133709	134003	294
rrn16	gene	ribosomal-rna	−	134456	135947	1491
trnV-GAC	gene	translation-rna	−	136173	136245	72
rps7	gene	ribosomal-protein	+	138660	139128	468
ndhB	gene	nad-dehydrogenase	+	139456	141614	2158
trnL-CAA	gene	translation-rna	+	142156	142237	81
ycf15	gene	other	−	142496	142694	198
ycf2	gene	other	−	142835	149636	6801
trnI-CAU	gene	translation-rna	+	149724	149798	74
rpl23	gene	ribosomal-protein	+	149957	150239	282
rpl2	gene	ribosomal-protein	+	150257	151739	1482

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomePQ075922.1DNA · accDPQ075922DNA · atpBPQ075922DNA · matKPQ075922DNA · ndhFPQ075922DNA · psbAPQ075922DNA · rbcLPQ075922DNA · rps12PQ075922DNA · ycf1PQ075922