Coordinate-aware organelle record

Scutellaria mexicana chloroplast genome

Available MW420976.1 152,544 bp 132 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

132 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	2	76	74
psbA	gene	photosystem-ii	−	371	1430	1059
trnK-UUU	gene	translation-rna	−	1674	4255	2581
matK	gene	other	−	1965	3501	1536
rps16	gene	ribosomal-protein	−	5178	6346	1168
trnQ-UUC	gene	translation-rna	−	7476	7548	72
psbK	gene	photosystem-ii	+	7872	8058	186
psbI	gene	photosystem-ii	+	8449	8560	111
trnS-GCU	gene	translation-rna	−	8678	8766	88
trnG-CGA	gene	translation-rna	+	9453	10207	754
trnR-UCU	gene	translation-rna	+	10381	10453	72
atpA	gene	atp-synthase	−	10549	12073	1524
atpF	gene	atp-synthase	−	12155	13383	1228
atpH	gene	atp-synthase	−	13743	13989	246
atpI	gene	atp-synthase	−	14994	15738	744
rps2	gene	ribosomal-protein	−	16080	16791	711
rpoC2	gene	rna-polymerase	−	17007	21213	4206
rpoC1	gene	rna-polymerase	−	21367	24216	2849
rpoB	gene	rna-polymerase	−	24242	27455	3213
trnC-GCA	gene	translation-rna	+	28634	28705	71
petN	gene	cytochrome	+	29423	29513	90
psbM	gene	photosystem-ii	−	30532	30646	114
trnD-GUC	gene	translation-rna	−	31172	31246	74
trnY-GUA	gene	translation-rna	−	31359	31443	84
trnE-UUC	gene	translation-rna	−	31502	31575	73
trnT-GGU	gene	translation-rna	+	32157	32229	72
psbD	gene	photosystem-ii	+	33538	34600	1062
psbC	gene	photosystem-ii	+	34547	35969	1422
trnS-UCA	gene	translation-rna	−	36212	36305	93
psbZ	gene	photosystem-ii	+	36624	36813	189
trnG-GCC	gene	translation-rna	+	37084	37155	71
trnfM-CAU	gene	translation-rna	−	37310	37384	74
rps14	gene	ribosomal-protein	−	37533	37836	303
psaB	gene	photosystem-i	−	37964	40169	2205
psaA	gene	photosystem-i	−	40194	42447	2253
ycf3	gene	other	−	43146	45059	1913
trnS-GGA	gene	translation-rna	+	45934	46021	87
rps4	gene	ribosomal-protein	−	46306	46912	606
trnT-UGU	gene	translation-rna	−	47255	47328	73
trnL-UAA	gene	translation-rna	+	48009	48579	570
trnF-GAA	gene	translation-rna	+	48883	48956	73
ndhJ	gene	nad-dehydrogenase	−	49606	50083	477
ndhK	gene	nad-dehydrogenase	−	50182	50860	678
ndhC	gene	nad-dehydrogenase	−	50912	51275	363
trnV-UAC	gene	translation-rna	−	52265	52918	653
trnM-CAU	gene	translation-rna	+	53098	53171	73
atpE	gene	atp-synthase	−	53380	53782	402
atpB	gene	atp-synthase	−	53778	55266	1488
rbcL	gene	other	+	56037	57480	1443
accD	gene	other	+	58200	59667	1467
psaI	gene	photosystem-i	+	60377	60488	111
ycf4	gene	other	+	60921	61476	555
cemA	gene	other	+	62158	62818	660
petA	gene	cytochrome	+	63024	63987	963
pabJ	gene	other	−	65011	65134	123
psbL	gene	photosystem-ii	−	65267	65384	117
psbF	gene	photosystem-ii	−	65407	65527	120
psbE	gene	photosystem-ii	−	65541	65793	252
petL	gene	cytochrome	+	66700	66796	96
petG	gene	cytochrome	+	66970	67084	114
trnW-CCA	gene	translation-rna	−	67202	67276	74
trnP-UGG	gene	translation-rna	−	67445	67519	74
psbJ	gene	photosystem-ii	+	67792	67927	135
rpl33	gene	ribosomal-protein	+	68398	68599	201
rps18	gene	ribosomal-protein	+	68773	69079	306
rpl20	gene	ribosomal-protein	−	69313	69700	387
rps12	gene	ribosomal-protein	−	70487	98635	28148
rps12	gene	ribosomal-protein	+	70487	139311	68824
clpP	gene	other	−	70755	72684	1929
psbB	gene	photosystem-ii	+	73157	74684	1527
psbT	gene	photosystem-ii	+	74874	74976	102
psbN	gene	photosystem-ii	−	75049	75181	132
psbH	gene	photosystem-ii	+	75284	75506	222
petB	gene	cytochrome	+	75630	76999	1369
petD	gene	cytochrome	+	77188	78390	1202
rpoA	gene	rna-polymerase	−	78552	79566	1014
rps11	gene	ribosomal-protein	−	79637	80054	417
rpl36	gene	ribosomal-protein	−	80155	80269	114
infA	gene	other	−	80364	80598	234
rps8	gene	ribosomal-protein	−	80717	81128	411
rpl14	gene	ribosomal-protein	−	81299	81668	369
rpl16	gene	ribosomal-protein	−	81795	83039	1244
rps3	gene	ribosomal-protein	−	83194	83857	663
rpl22	gene	ribosomal-protein	−	83858	84314	456
rps19	gene	ribosomal-protein	−	84373	84652	279
rpl2	gene	ribosomal-protein	−	84706	86189	1483
rpl23	gene	ribosomal-protein	−	86207	86489	282
trnI-CAU	gene	translation-rna	−	86648	86722	74
ycf2	gene	other	+	86810	93620	6810
ycf15	gene	other	+	93761	93959	198
trnL-CAA	gene	translation-rna	−	94214	94295	81
ndhB	gene	nad-dehydrogenase	−	94837	97049	2212
rps7	gene	ribosomal-protein	−	97323	97791	468
trnV-GAC	gene	translation-rna	+	100212	100284	72
rrn16	gene	ribosomal-rna	+	100511	102002	1491
trnI-GAU	gene	translation-rna	+	102300	103321	1021
trnA-UGC	gene	translation-rna	+	103386	104273	887
rrn23	gene	ribosomal-rna	+	104442	107255	2813
rrn4.5	gene	ribosomal-rna	+	107353	107406	53
rrn5	gene	ribosomal-rna	+	107702	107823	121
trnR-ACG	gene	translation-rna	+	108057	108131	74
trnN-GUU	gene	translation-rna	+	108677	108749	72
ndhF	gene	nad-dehydrogenase	−	109824	112065	2241
rpl32	gene	ribosomal-protein	+	112586	112763	177
trnL-UAG	gene	translation-rna	+	113200	113280	80
ccsA	gene	other	+	113386	114361	975
ndhD	gene	nad-dehydrogenase	−	114593	116114	1521
psaC	gene	photosystem-i	−	116216	116462	246
ndhE	gene	nad-dehydrogenase	−	116718	117024	306
ndhG	gene	nad-dehydrogenase	−	117244	117775	531
ndhI	gene	nad-dehydrogenase	−	118139	118640	501
ndhA	gene	nad-dehydrogenase	−	118720	120821	2101
ndhH	gene	nad-dehydrogenase	−	120822	122004	1182
rps15	gene	ribosomal-protein	−	122106	122379	273
ycf1	gene	other	−	122645	128078	5433
trnN-GUU	gene	translation-rna	+	128406	128478	72
trnR-ACG	gene	translation-rna	−	129024	129098	74
rrn5	gene	ribosomal-rna	−	129332	129453	121
rrn4.5	gene	ribosomal-rna	−	129749	129802	53
rrn23	gene	ribosomal-rna	−	129900	132713	2813
trnA-UGC	gene	translation-rna	−	132882	133769	887
trnI-GAU	gene	translation-rna	−	133834	134855	1021
rrn16	gene	ribosomal-rna	−	135153	136644	1491
trnV-GAC	gene	translation-rna	−	136871	136943	72
rps7	gene	ribosomal-protein	+	139364	139832	468
ndhB	gene	nad-dehydrogenase	+	140106	142318	2212
trnL-CAA	gene	translation-rna	+	142860	142941	81
ycf15	gene	other	−	143196	143394	198
ycf2	gene	other	−	143535	150345	6810
trnI-CAU	gene	translation-rna	+	150433	150507	74
rpl23	gene	ribosomal-protein	+	150666	150948	282
rpl2	gene	ribosomal-protein	+	150966	152449	1483

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomeMW420976.1DNA · accDMW420976DNA · atpBMW420976DNA · matKMW420976DNA · ndhFMW420976DNA · psbAMW420976DNA · rbcLMW420976DNA · rps12MW420976DNA · ycf1MW420976