Coordinate-aware organelle record

Scutellaria microdasys chloroplast genome

Available PQ059319.1 151,846 bp 133 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

133 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	3	77	74
psbA	gene	photosystem-ii	−	373	1432	1059
trnK-UUU	gene	translation-rna	−	1673	4255	2582
matK	gene	other	−	1963	3490	1527
rps16	gene	ribosomal-protein	−	5156	6315	1159
trnQ-UUG	gene	translation-rna	−	7060	7132	72
psbK	gene	photosystem-ii	+	7456	7642	186
psbI	gene	photosystem-ii	+	8036	8147	111
trnS-GCU	gene	translation-rna	−	8266	8354	88
trnG-UCC	gene	translation-rna	+	9054	9811	757
trnR-UCU	gene	translation-rna	+	9985	10057	72
atpA	gene	atp-synthase	−	10153	11677	1524
atpF	gene	atp-synthase	−	11758	12988	1230
atpH	gene	atp-synthase	−	13348	13594	246
atpI	gene	atp-synthase	−	14581	15325	744
rps2	gene	ribosomal-protein	−	15670	16381	711
rpoC2	gene	rna-polymerase	−	16595	20801	4206
rpoC1	gene	rna-polymerase	−	20955	23792	2837
rpoB	gene	rna-polymerase	−	23818	27031	3213
trnC-GCA	gene	translation-rna	+	28191	28262	71
petN	gene	cytochrome	+	28976	29066	90
psbM	gene	photosystem-ii	−	30148	30253	105
trnD-GUC	gene	translation-rna	−	30778	30852	74
trnY-GUA	gene	translation-rna	−	30965	31049	84
trnE-UUC	gene	translation-rna	−	31108	31181	73
trnT-GGU	gene	translation-rna	+	31756	31828	72
psbD	gene	photosystem-ii	+	33133	34195	1062
psbC	gene	photosystem-ii	+	34142	35564	1422
trnS-UGA	gene	translation-rna	−	35799	35891	92
psbZ	gene	photosystem-ii	+	36206	36395	189
trnG-GCC	gene	translation-rna	+	36671	36742	71
trnfM-CAU	gene	translation-rna	−	36889	36963	74
rps14	gene	ribosomal-protein	−	37117	37420	303
psaB	gene	photosystem-i	−	37548	39753	2205
psaA	gene	photosystem-i	−	39778	42031	2253
ycf3	gene	other	−	42719	44641	1922
trnS-GGA	gene	translation-rna	+	45523	45610	87
rps4	gene	ribosomal-protein	−	45885	46491	606
trnT-UGU	gene	translation-rna	−	46837	46910	73
trnL-UAA	gene	translation-rna	+	47590	48150	560
trnF-GAA	gene	translation-rna	+	48451	48524	73
ndhJ	gene	nad-dehydrogenase	−	49170	49647	477
ndhK	gene	nad-dehydrogenase	−	49755	50433	678
ndhC	gene	nad-dehydrogenase	−	50486	50849	363
trnV-UAC	gene	translation-rna	−	51834	52487	653
trnM-CAU	gene	translation-rna	+	52675	52748	73
atpE	gene	atp-synthase	−	52941	53343	402
atpB	gene	atp-synthase	−	53339	54836	1497
rbcL	gene	other	+	55586	57050	1464
accD	gene	other	+	57763	59242	1479
psaI	gene	photosystem-i	+	59948	60059	111
ycf4	gene	other	+	60492	61047	555
cemA	gene	other	+	61795	62395	600
petA	gene	cytochrome	+	62601	63564	963
psbJ	gene	photosystem-ii	−	64571	64694	123
psbL	gene	photosystem-ii	−	64827	64944	117
psbF	gene	photosystem-ii	−	64967	65087	120
psbE	gene	photosystem-ii	−	65101	65353	252
petL	gene	cytochrome	+	66230	66326	96
petG	gene	cytochrome	+	66501	66615	114
trnW-CCA	gene	translation-rna	−	66733	66807	74
trnP-UGG	gene	translation-rna	−	66976	67050	74
psaJ	gene	photosystem-i	+	67321	67456	135
rpl33	gene	ribosomal-protein	+	67931	68132	201
rps18	gene	ribosomal-protein	+	68306	68612	306
rpl20	gene	ribosomal-protein	−	68846	69233	387
rps12	gene	ribosomal-protein	−	70015	98078	28063
rps12	gene	ribosomal-protein	+	70015	138614	68599
clpP	gene	other	−	70282	72211	1929
psbB	gene	photosystem-ii	+	72662	74189	1527
psbT	gene	photosystem-ii	+	74380	74488	108
psbN	gene	photosystem-ii	−	74548	74680	132
psbH	gene	photosystem-ii	+	74783	75005	222
petB	gene	cytochrome	+	75129	76498	1369
petD	gene	cytochrome	+	76680	77887	1207
rpoA	gene	rna-polymerase	−	78241	79042	801
rps11	gene	ribosomal-protein	−	79113	79530	417
rpl36	gene	ribosomal-protein	−	79631	79745	114
infA	gene	other	−	79839	80073	234
rps8	gene	ribosomal-protein	−	80196	80607	411
rpl14	gene	ribosomal-protein	−	80759	81128	369
rpl16	gene	ribosomal-protein	−	81254	82488	1234
rps3	gene	ribosomal-protein	−	82643	83306	663
rpl22	gene	ribosomal-protein	−	83307	83763	456
rps19	gene	ribosomal-protein	−	83822	84101	279
rpl2	gene	ribosomal-protein	−	84155	85637	1482
rpl23	gene	ribosomal-protein	−	85655	85937	282
trnI-CAU	gene	translation-rna	−	86096	86170	74
ycf2	gene	other	+	86258	93059	6801
ycf15	gene	other	+	93149	93398	249
trnL-CAA	gene	translation-rna	−	93657	93738	81
ndhB	gene	nad-dehydrogenase	−	94280	96492	2212
rps7	gene	ribosomal-protein	−	96766	97234	468
trnV-GAC	gene	translation-rna	+	99649	99721	72
rrn16	gene	ribosomal-rna	+	99947	101438	1491
trnI-GAU	gene	translation-rna	+	101736	102757	1021
trnA-UGC	gene	translation-rna	+	102821	103709	888
rrn23	gene	ribosomal-rna	+	103878	106690	2812
rrn4.5	gene	ribosomal-rna	+	106788	106891	103
rrn5	gene	ribosomal-rna	+	107138	107259	121
trnR-ACG	gene	translation-rna	+	107493	107567	74
trnN-GUU	gene	translation-rna	−	108115	108187	72
ndhF	gene	nad-dehydrogenase	−	109243	111505	2262
rpl32	gene	ribosomal-protein	+	111833	112010	177
trnL-UAG	gene	translation-rna	+	112456	112536	80
ccsA	gene	other	+	112637	113612	975
ndhD	gene	nad-dehydrogenase	−	113851	115381	1530
psaC	gene	photosystem-i	−	115482	115728	246
ndhE	gene	nad-dehydrogenase	−	115983	116289	306
ndhG	gene	nad-dehydrogenase	−	116505	117036	531
ndhI	gene	nad-dehydrogenase	−	117402	117903	501
ndhA	gene	nad-dehydrogenase	−	117988	120110	2122
ndhH	gene	nad-dehydrogenase	−	120111	121293	1182
rps15	gene	ribosomal-protein	−	121389	121662	273
ycf1	gene	other	−	121859	127496	5637
trnN-GUU	gene	translation-rna	+	127714	127786	72
trnR-ACG	gene	translation-rna	−	128334	128408	74
rrn5	gene	ribosomal-rna	−	128642	128763	121
rrn4.5	gene	ribosomal-rna	−	129010	129113	103
rrn23	gene	ribosomal-rna	−	129211	132023	2812
trnA-UGC	gene	translation-rna	−	132192	133080	888
trnI-GAU	gene	translation-rna	−	133144	134165	1021
ycf68	gene	other	−	133716	134010	294
rrn16	gene	ribosomal-rna	−	134463	135954	1491
trnV-GAC	gene	translation-rna	−	136180	136252	72
rps7	gene	ribosomal-protein	+	138667	139135	468
ndhB	gene	nad-dehydrogenase	+	139409	141621	2212
trnL-CAA	gene	translation-rna	+	142163	142244	81
ycf15	gene	other	−	142503	142752	249
ycf2	gene	other	−	142842	149643	6801
trnI-CAU	gene	translation-rna	+	149731	149805	74
rpl23	gene	ribosomal-protein	+	149964	150246	282
rpl2	gene	ribosomal-protein	+	150264	151746	1482

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomePQ059319.1DNA · accDPQ059319DNA · atpBPQ059319DNA · matKPQ059319DNA · ndhFPQ059319DNA · psbAPQ059319DNA · rbcLPQ059319DNA · rps12PQ059319DNA · ycf1PQ059319