Coordinate-aware organelle record

Scutellaria microviolacea chloroplast genome

Available PQ059320.1 151,865 bp 133 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

133 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	2	76	74
psbA	gene	photosystem-ii	−	369	1428	1059
trnK-UUU	gene	translation-rna	−	1669	4258	2589
matK	gene	other	−	1964	3500	1536
rps16	gene	ribosomal-protein	−	5136	6300	1164
trnQ-UUG	gene	translation-rna	−	7304	7376	72
psbK	gene	photosystem-ii	+	7700	7886	186
psbI	gene	photosystem-ii	+	8278	8389	111
trnS-GCU	gene	translation-rna	−	8507	8595	88
trnG-UCC	gene	translation-rna	+	9276	10037	761
trnR-UCU	gene	translation-rna	+	10207	10279	72
atpA	gene	atp-synthase	−	10375	11899	1524
atpF	gene	atp-synthase	−	11981	13209	1228
atpH	gene	atp-synthase	−	13572	13818	246
atpI	gene	atp-synthase	−	14813	15557	744
rps2	gene	ribosomal-protein	−	15905	16616	711
rpoC2	gene	rna-polymerase	−	16832	21038	4206
rpoC1	gene	rna-polymerase	−	21192	24014	2822
rpoB	gene	rna-polymerase	−	24040	27253	3213
trnC-GCA	gene	translation-rna	+	28413	28484	71
petN	gene	cytochrome	+	29195	29285	90
psbM	gene	photosystem-ii	−	30290	30395	105
trnD-GUC	gene	translation-rna	−	30921	30995	74
trnY-GUA	gene	translation-rna	−	31108	31192	84
trnE-UUC	gene	translation-rna	−	31251	31324	73
trnT-GGU	gene	translation-rna	+	31899	31971	72
psbD	gene	photosystem-ii	+	33276	34338	1062
psbC	gene	photosystem-ii	+	34285	35707	1422
trnS-UGA	gene	translation-rna	−	35942	36034	92
psbZ	gene	photosystem-ii	+	36353	36542	189
trnG-GCC	gene	translation-rna	+	36813	36884	71
trnfM-CAU	gene	translation-rna	−	37028	37102	74
rps14	gene	ribosomal-protein	−	37251	37554	303
psaB	gene	photosystem-i	−	37681	39886	2205
psaA	gene	photosystem-i	−	39911	42164	2253
ycf3	gene	other	−	42832	44755	1923
trnS-GGA	gene	translation-rna	+	45628	45715	87
rps4	gene	ribosomal-protein	−	46000	46606	606
trnT-UGU	gene	translation-rna	−	46887	46960	73
trnL-UAA	gene	translation-rna	+	47645	48206	561
trnF-GAA	gene	translation-rna	+	48512	48585	73
ndhJ	gene	nad-dehydrogenase	−	49233	49710	477
ndhK	gene	nad-dehydrogenase	−	49817	50579	762
ndhC	gene	nad-dehydrogenase	−	50548	50911	363
trnV-UAC	gene	translation-rna	−	51761	52414	653
trnM-CAU	gene	translation-rna	+	52594	52667	73
atpE	gene	atp-synthase	−	52882	53284	402
atpB	gene	atp-synthase	−	53280	54768	1488
rbcL	gene	other	+	55536	57000	1464
accD	gene	other	+	57733	59200	1467
psaI	gene	photosystem-i	+	59757	59868	111
ycf4	gene	other	+	60301	60856	555
cemA	gene	other	+	61574	62174	600
petA	gene	cytochrome	+	62380	63343	963
psbJ	gene	photosystem-ii	−	64351	64474	123
psbL	gene	photosystem-ii	−	64607	64724	117
psbF	gene	photosystem-ii	−	64747	64867	120
psbE	gene	photosystem-ii	−	64881	65133	252
petL	gene	cytochrome	+	66041	66137	96
petG	gene	cytochrome	+	66312	66426	114
trnW-CCA	gene	translation-rna	−	66544	66618	74
trnP-UGG	gene	translation-rna	−	66787	66861	74
psaJ	gene	photosystem-i	+	67133	67268	135
rpl33	gene	ribosomal-protein	+	67735	67936	201
rps18	gene	ribosomal-protein	+	68110	68416	306
rpl20	gene	ribosomal-protein	−	68653	69040	387
rps12	gene	ribosomal-protein	−	69829	97918	28089
rps12	gene	ribosomal-protein	+	69829	138644	68815
clpP	gene	other	−	70097	72030	1933
psbB	gene	photosystem-ii	+	72474	74001	1527
psbT	gene	photosystem-ii	+	74192	74294	102
psbN	gene	photosystem-ii	−	74367	74499	132
psbH	gene	photosystem-ii	+	74602	74824	222
petB	gene	cytochrome	+	74948	76318	1370
petD	gene	cytochrome	+	76506	77708	1202
rpoA	gene	rna-polymerase	−	77870	78884	1014
rps11	gene	ribosomal-protein	−	78955	79372	417
rpl36	gene	ribosomal-protein	−	79473	79587	114
infA	gene	other	−	79682	79916	234
rps8	gene	ribosomal-protein	−	80035	80446	411
rpl14	gene	ribosomal-protein	−	80613	80982	369
rpl16	gene	ribosomal-protein	−	81108	82335	1227
rps3	gene	ribosomal-protein	−	82489	83152	663
rpl22	gene	ribosomal-protein	−	83153	83609	456
rps19	gene	ribosomal-protein	−	83668	83947	279
rpl2	gene	ribosomal-protein	−	84001	85484	1483
rpl23	gene	ribosomal-protein	−	85502	85784	282
trnI-CAU	gene	translation-rna	−	85943	86017	74
ycf2	gene	other	+	86105	92903	6798
ycf15	gene	other	+	92993	93242	249
trnL-CAA	gene	translation-rna	−	93497	93578	81
ndhB	gene	nad-dehydrogenase	−	94120	96278	2158
rps7	gene	ribosomal-protein	−	96606	97074	468
trnV-GAC	gene	translation-rna	+	99495	99567	72
rrn16	gene	ribosomal-rna	+	99794	101285	1491
trnI-GAU	gene	translation-rna	+	101583	102604	1021
trnA-UGC	gene	translation-rna	+	102668	103549	881
rrn23	gene	ribosomal-rna	+	103718	106531	2813
rrn4.5	gene	ribosomal-rna	+	106629	106732	103
rrn5	gene	ribosomal-rna	+	106979	107100	121
trnR-ACG	gene	translation-rna	+	107334	107408	74
trnN-GUU	gene	translation-rna	−	107954	108026	72
ndhF	gene	nad-dehydrogenase	−	109102	111343	2241
rpl32	gene	ribosomal-protein	+	111863	112040	177
trnL-UAG	gene	translation-rna	+	112484	112564	80
ccsA	gene	other	+	112647	113622	975
ndhD	gene	nad-dehydrogenase	−	113862	115365	1503
psaC	gene	photosystem-i	−	115484	115730	246
ndhE	gene	nad-dehydrogenase	−	115986	116292	306
ndhG	gene	nad-dehydrogenase	−	116512	117043	531
ndhI	gene	nad-dehydrogenase	−	117407	117908	501
ndhA	gene	nad-dehydrogenase	−	117988	120063	2075
ndhH	gene	nad-dehydrogenase	−	120064	121246	1182
rps15	gene	ribosomal-protein	−	121348	121621	273
ycf1	gene	other	−	121887	127527	5640
trnN-GUU	gene	translation-rna	+	127745	127817	72
trnR-ACG	gene	translation-rna	−	128363	128437	74
rrn5	gene	ribosomal-rna	−	128671	128792	121
rrn4.5	gene	ribosomal-rna	−	129039	129142	103
rrn23	gene	ribosomal-rna	−	129240	132053	2813
trnA-UGC	gene	translation-rna	−	132222	133103	881
trnI-GAU	gene	translation-rna	−	133167	134188	1021
ycf68	gene	other	−	133793	134033	240
rrn16	gene	ribosomal-rna	−	134486	135977	1491
trnV-GAC	gene	translation-rna	−	136204	136276	72
rps7	gene	ribosomal-protein	+	138697	139165	468
ndhB	gene	nad-dehydrogenase	+	139493	141651	2158
trnL-CAA	gene	translation-rna	+	142193	142274	81
ycf15	gene	other	−	142529	142778	249
ycf2	gene	other	−	142868	149666	6798
trnI-CAU	gene	translation-rna	+	149754	149828	74
rpl23	gene	ribosomal-protein	+	149987	150269	282
rpl2	gene	ribosomal-protein	+	150287	151770	1483

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomePQ059320.1DNA · accDPQ059320DNA · atpBPQ059320DNA · matKPQ059320DNA · ndhFPQ059320DNA · psbAPQ059320DNA · rbcLPQ059320DNA · rps12PQ059320DNA · ycf1PQ059320