Coordinate-aware organelle record

Scutellaria moniliorhiza chloroplast genome

Available MW420954.1 152,594 bp 132 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

132 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	2	76	74
psbA	gene	photosystem-ii	−	379	1438	1059
trnK-UUU	gene	translation-rna	−	1675	4255	2580
matK	gene	other	−	1966	3502	1536
rps16	gene	ribosomal-protein	−	5162	6331	1169
trnQ-UUC	gene	translation-rna	−	7461	7533	72
psbK	gene	photosystem-ii	+	7857	8043	186
psbI	gene	photosystem-ii	+	8434	8545	111
trnS-GCU	gene	translation-rna	−	8661	8749	88
trnG-CGA	gene	translation-rna	+	9436	10196	760
trnR-UCU	gene	translation-rna	+	10370	10442	72
atpA	gene	atp-synthase	−	10538	12062	1524
atpF	gene	atp-synthase	−	12135	13363	1228
atpH	gene	atp-synthase	−	13731	13977	246
atpI	gene	atp-synthase	−	14973	15717	744
rps2	gene	ribosomal-protein	−	16065	16776	711
rpoC2	gene	rna-polymerase	−	16992	21198	4206
rpoC1	gene	rna-polymerase	−	21352	24189	2837
rpoB	gene	rna-polymerase	−	24215	27428	3213
trnC-GCA	gene	translation-rna	+	28591	28662	71
petN	gene	cytochrome	+	29372	29462	90
psbM	gene	photosystem-ii	−	30488	30593	105
trnD-GUC	gene	translation-rna	−	31118	31192	74
trnY-GUA	gene	translation-rna	−	31305	31389	84
trnE-UUC	gene	translation-rna	−	31448	31521	73
trnT-GGU	gene	translation-rna	+	32103	32175	72
psbD	gene	photosystem-ii	+	33476	34538	1062
psbC	gene	photosystem-ii	+	34485	35907	1422
trnS-UCA	gene	translation-rna	−	36149	36242	93
psbZ	gene	photosystem-ii	+	36561	36750	189
trnG-GCC	gene	translation-rna	+	37021	37092	71
trnfM-CAU	gene	translation-rna	−	37237	37311	74
rps14	gene	ribosomal-protein	−	37460	37763	303
psaB	gene	photosystem-i	−	37890	40095	2205
psaA	gene	photosystem-i	−	40120	42373	2253
ycf3	gene	other	−	43047	44971	1924
trnS-GGA	gene	translation-rna	+	45856	45943	87
rps4	gene	ribosomal-protein	−	46228	46834	606
trnT-UGU	gene	translation-rna	−	47172	47245	73
trnL-UAA	gene	translation-rna	+	47930	48500	570
trnF-GAA	gene	translation-rna	+	48805	48878	73
ndhJ	gene	nad-dehydrogenase	−	49526	50003	477
ndhK	gene	nad-dehydrogenase	−	50110	50788	678
ndhC	gene	nad-dehydrogenase	−	50840	51203	363
trnV-UAC	gene	translation-rna	−	52199	52852	653
trnM-CAU	gene	translation-rna	+	53032	53105	73
atpE	gene	atp-synthase	−	53314	53716	402
atpB	gene	atp-synthase	−	53712	55200	1488
rbcL	gene	other	+	55972	57415	1443
accD	gene	other	+	58125	59592	1467
psaI	gene	photosystem-i	+	60322	60433	111
ycf4	gene	other	+	60866	61421	555
cemA	gene	other	+	62109	62769	660
petA	gene	cytochrome	+	62975	63938	963
pabJ	gene	other	−	64955	65078	123
psbL	gene	photosystem-ii	−	65211	65328	117
psbF	gene	photosystem-ii	−	65351	65471	120
psbE	gene	photosystem-ii	−	65485	65737	252
petL	gene	cytochrome	+	66645	66741	96
petG	gene	cytochrome	+	66915	67029	114
trnW-CCA	gene	translation-rna	−	67147	67221	74
trnP-UGG	gene	translation-rna	−	67390	67464	74
psbJ	gene	photosystem-ii	+	67735	67870	135
rpl33	gene	ribosomal-protein	+	68341	68542	201
rps18	gene	ribosomal-protein	+	68716	69022	306
rpl20	gene	ribosomal-protein	−	69259	69646	387
rps12	gene	ribosomal-protein	−	70435	98572	28137
rps12	gene	ribosomal-protein	+	70435	139361	68926
clpP	gene	other	−	70703	72638	1935
psbB	gene	photosystem-ii	+	73112	74639	1527
psbT	gene	photosystem-ii	+	74830	74932	102
psbN	gene	photosystem-ii	−	75005	75137	132
psbH	gene	photosystem-ii	+	75240	75462	222
petB	gene	cytochrome	+	75586	76952	1366
petD	gene	cytochrome	+	77140	78342	1202
rpoA	gene	rna-polymerase	−	78504	79518	1014
rps11	gene	ribosomal-protein	−	79589	80006	417
rpl36	gene	ribosomal-protein	−	80107	80221	114
infA	gene	other	−	80316	80550	234
rps8	gene	ribosomal-protein	−	80669	81080	411
rpl14	gene	ribosomal-protein	−	81238	81607	369
rpl16	gene	ribosomal-protein	−	81733	82977	1244
rps3	gene	ribosomal-protein	−	83131	83794	663
rpl22	gene	ribosomal-protein	−	83795	84251	456
rps19	gene	ribosomal-protein	−	84310	84589	279
rpl2	gene	ribosomal-protein	−	84643	86126	1483
rpl23	gene	ribosomal-protein	−	86144	86426	282
trnI-CAU	gene	translation-rna	−	86585	86659	74
ycf2	gene	other	+	86747	93557	6810
ycf15	gene	other	+	93698	93896	198
trnL-CAA	gene	translation-rna	−	94151	94232	81
ndhB	gene	nad-dehydrogenase	−	94774	96986	2212
rps7	gene	ribosomal-protein	−	97260	97728	468
trnV-GAC	gene	translation-rna	+	100159	100231	72
rrn16	gene	ribosomal-rna	+	100458	101951	1493
trnI-GAU	gene	translation-rna	+	102249	103269	1020
trnA-UGC	gene	translation-rna	+	103334	104220	886
rrn23	gene	ribosomal-rna	+	104389	107202	2813
rrn4.5	gene	ribosomal-rna	+	107300	107403	103
rrn5	gene	ribosomal-rna	+	107650	107771	121
trnR-ACG	gene	translation-rna	+	108005	108079	74
trnN-GUU	gene	translation-rna	+	108625	108697	72
ndhF	gene	nad-dehydrogenase	−	109766	112007	2241
rpl32	gene	ribosomal-protein	+	112523	112700	177
trnL-UAG	gene	translation-rna	+	113146	113226	80
ccsA	gene	other	+	113322	114297	975
ndhD	gene	nad-dehydrogenase	−	114529	116050	1521
psaC	gene	photosystem-i	−	116151	116397	246
ndhE	gene	nad-dehydrogenase	−	116658	116964	306
ndhG	gene	nad-dehydrogenase	−	117184	117715	531
ndhI	gene	nad-dehydrogenase	−	118078	118579	501
ndhA	gene	nad-dehydrogenase	−	118659	120751	2092
ndhH	gene	nad-dehydrogenase	−	120752	121934	1182
rps15	gene	ribosomal-protein	−	122036	122309	273
ycf1	gene	other	−	122579	128123	5544
trnN-GUU	gene	translation-rna	+	128445	128517	72
trnR-ACG	gene	translation-rna	−	129063	129137	74
rrn5	gene	ribosomal-rna	−	129371	129492	121
rrn4.5	gene	ribosomal-rna	−	129739	129842	103
rrn23	gene	ribosomal-rna	−	129940	132753	2813
trnA-UGC	gene	translation-rna	−	132922	133808	886
trnI-GAU	gene	translation-rna	−	133873	134893	1020
rrn16	gene	ribosomal-rna	−	135191	136684	1493
trnV-GAC	gene	translation-rna	−	136911	136983	72
rps7	gene	ribosomal-protein	+	139414	139882	468
ndhB	gene	nad-dehydrogenase	+	140156	142368	2212
trnL-CAA	gene	translation-rna	+	142910	142991	81
ycf15	gene	other	−	143246	143444	198
ycf2	gene	other	−	143585	150395	6810
trnI-CAU	gene	translation-rna	+	150483	150557	74
rpl23	gene	ribosomal-protein	+	150716	150998	282
rpl2	gene	ribosomal-protein	+	151016	152499	1483

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomeMW420954.1DNA · accDMW420954DNA · atpBMW420954DNA · matKMW420954DNA · ndhFMW420954DNA · psbAMW420954DNA · rbcLMW420954DNA · rps12MW420954DNA · ycf1MW420954