Coordinate-aware organelle record

Scutellaria multicaulis chloroplast genome

Available MW420936.1 152,234 bp 132 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

132 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	9	83	74
psbA	gene	photosystem-ii	−	380	1439	1059
trnK-UUU	gene	translation-rna	−	1685	4254	2569
matK	gene	other	−	1963	3490	1527
rps16	gene	ribosomal-protein	−	5156	6317	1161
trnQ-UUG	gene	translation-rna	−	7446	7518	72
psbK	gene	photosystem-ii	+	7842	8028	186
psbI	gene	photosystem-ii	+	8416	8527	111
trnS-GCU	gene	translation-rna	−	8644	8732	88
trnG-UCC	gene	translation-rna	+	9427	10185	758
trnR-UCU	gene	translation-rna	+	10359	10431	72
atpA	gene	atp-synthase	−	10527	12051	1524
atpF	gene	atp-synthase	−	12133	13363	1230
atpH	gene	atp-synthase	−	13724	13970	246
atpI	gene	atp-synthase	−	14957	15701	744
rps2	gene	ribosomal-protein	−	16046	16757	711
rpoC2	gene	rna-polymerase	−	16971	21177	4206
rpoC1	gene	rna-polymerase	−	21331	24164	2833
rpoB	gene	rna-polymerase	−	24190	27403	3213
trnC-GCA	gene	translation-rna	+	28564	28635	71
petN	gene	cytochrome	+	29348	29438	90
psbM	gene	photosystem-ii	−	30511	30616	105
trnD-GUC	gene	translation-rna	−	31141	31215	74
trnY-GUA	gene	translation-rna	−	31328	31412	84
trnE-UUC	gene	translation-rna	−	31471	31544	73
trnT-GGU	gene	translation-rna	+	32119	32191	72
psbD	gene	photosystem-ii	+	33495	34557	1062
psbC	gene	photosystem-ii	+	34504	35926	1422
trnS-UCA	gene	translation-rna	−	36160	36253	93
psbZ	gene	photosystem-ii	+	36568	36757	189
trnG-GCC	gene	translation-rna	+	37031	37102	71
trnfM-CAU	gene	translation-rna	−	37247	37321	74
rps14	gene	ribosomal-protein	−	37475	37778	303
psaB	gene	photosystem-i	−	37905	40110	2205
psaA	gene	photosystem-i	−	40135	42388	2253
ycf3	gene	other	−	43085	45006	1921
trnS-GGA	gene	translation-rna	+	45894	45981	87
rps4	gene	ribosomal-protein	−	46256	46862	606
trnT-UGU	gene	translation-rna	−	47202	47275	73
trnL-UAA	gene	translation-rna	+	47959	48520	561
trnF-GAA	gene	translation-rna	+	48826	48899	73
ndhJ	gene	nad-dehydrogenase	−	49546	50023	477
ndhK	gene	nad-dehydrogenase	−	50131	50809	678
ndhC	gene	nad-dehydrogenase	−	50862	51225	363
trnV-UAC	gene	translation-rna	−	52201	52854	653
trnM-CAU	gene	translation-rna	+	53042	53115	73
atpE	gene	atp-synthase	−	53308	53710	402
atpB	gene	atp-synthase	−	53706	55203	1497
rbcL	gene	other	+	55968	57411	1443
accD	gene	other	+	58112	59591	1479
psaI	gene	photosystem-i	+	60296	60407	111
ycf4	gene	other	+	60840	61395	555
cemA	gene	other	+	62083	62743	660
petA	gene	cytochrome	+	62949	63912	963
pabJ	gene	other	−	64918	65041	123
psbL	gene	photosystem-ii	−	65174	65291	117
psbF	gene	photosystem-ii	−	65314	65434	120
psbE	gene	photosystem-ii	−	65448	65700	252
petL	gene	cytochrome	+	66580	66676	96
petG	gene	cytochrome	+	66851	66965	114
trnW-CCA	gene	translation-rna	−	67083	67157	74
trnP-UGG	gene	translation-rna	−	67326	67400	74
psbJ	gene	photosystem-ii	+	67671	67806	135
rpl33	gene	ribosomal-protein	+	68282	68483	201
rps18	gene	ribosomal-protein	+	68656	68962	306
rpl20	gene	ribosomal-protein	−	69195	69582	387
rps12	gene	ribosomal-protein	−	70364	98438	28074
rps12	gene	ribosomal-protein	+	70364	138994	68630
clpP	gene	other	−	70631	72562	1931
psbB	gene	photosystem-ii	+	73013	74540	1527
psbT	gene	photosystem-ii	+	74731	74839	108
psbN	gene	photosystem-ii	−	74899	75031	132
psbH	gene	photosystem-ii	+	75134	75356	222
petB	gene	cytochrome	+	75480	76852	1372
petD	gene	cytochrome	+	77034	78240	1206
rpoA	gene	rna-polymerase	−	78541	79396	855
rps11	gene	ribosomal-protein	−	79467	79884	417
rpl36	gene	ribosomal-protein	−	79985	80099	114
infA	gene	other	−	80193	80427	234
rps8	gene	ribosomal-protein	−	80549	80960	411
rpl14	gene	ribosomal-protein	−	81111	81480	369
rpl16	gene	ribosomal-protein	−	81606	82840	1234
rps3	gene	ribosomal-protein	−	82995	83658	663
rpl22	gene	ribosomal-protein	−	83659	84115	456
rps19	gene	ribosomal-protein	−	84174	84453	279
rpl2	gene	ribosomal-protein	−	84506	85988	1482
rpl23	gene	ribosomal-protein	−	86006	86288	282
trnI-CAU	gene	translation-rna	−	86447	86521	74
ycf2	gene	other	+	86609	93419	6810
ycf15	gene	other	+	93494	93758	264
trnL-CAA	gene	translation-rna	−	94017	94098	81
ndhB	gene	nad-dehydrogenase	−	94640	96852	2212
rps7	gene	ribosomal-protein	−	97126	97594	468
trnV-GAC	gene	translation-rna	+	100009	100081	72
rrn16	gene	ribosomal-rna	+	100307	101798	1491
trnI-GAU	gene	translation-rna	+	102096	103116	1020
trnA-UGC	gene	translation-rna	+	103181	104070	889
rrn23	gene	ribosomal-rna	+	104239	107051	2812
rrn4.5	gene	ribosomal-rna	+	107149	107252	103
rrn5	gene	ribosomal-rna	+	107499	107620	121
trnR-ACG	gene	translation-rna	+	107854	107928	74
trnN-GUU	gene	translation-rna	+	108476	108548	72
ndhF	gene	nad-dehydrogenase	−	109604	111866	2262
rpl32	gene	ribosomal-protein	+	112194	112371	177
trnL-UAG	gene	translation-rna	+	112817	112897	80
ccsA	gene	other	+	112999	113974	975
ndhD	gene	nad-dehydrogenase	−	114230	115760	1530
psaC	gene	photosystem-i	−	115859	116105	246
ndhE	gene	nad-dehydrogenase	−	116356	116662	306
ndhG	gene	nad-dehydrogenase	−	116878	117409	531
ndhI	gene	nad-dehydrogenase	−	117776	118277	501
ndhA	gene	nad-dehydrogenase	−	118357	120485	2128
ndhH	gene	nad-dehydrogenase	−	120486	121668	1182
rps15	gene	ribosomal-protein	−	121764	122037	273
ycf1	gene	other	−	122235	127764	5529
trnN-GUU	gene	translation-rna	+	128093	128165	72
trnR-ACG	gene	translation-rna	−	128713	128787	74
rrn5	gene	ribosomal-rna	−	129021	129142	121
rrn4.5	gene	ribosomal-rna	−	129389	129492	103
rrn23	gene	ribosomal-rna	−	129590	132402	2812
trnA-UGC	gene	translation-rna	−	132571	133460	889
trnI-GAU	gene	translation-rna	−	133525	134545	1020
rrn16	gene	ribosomal-rna	−	134843	136334	1491
trnV-GAC	gene	translation-rna	−	136560	136632	72
rps7	gene	ribosomal-protein	+	139047	139515	468
ndhB	gene	nad-dehydrogenase	+	139789	142001	2212
trnL-CAA	gene	translation-rna	+	142543	142624	81
ycf15	gene	other	−	142883	143147	264
ycf2	gene	other	−	143222	150032	6810
trnI-CAU	gene	translation-rna	+	150120	150194	74
rpl23	gene	ribosomal-protein	+	150353	150635	282
rpl2	gene	ribosomal-protein	+	150653	152135	1482

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomeMW420936.1DNA · accDMW420936DNA · atpBMW420936DNA · matKMW420936DNA · ndhFMW420936DNA · psbAMW420936DNA · rbcLMW420936DNA · rps12MW420936DNA · ycf1MW420936