Coordinate-aware organelle record

Scutellaria muramatsui chloroplast genome

Available PQ059322.1 152,059 bp 133 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

133 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	2	76	74
psbA	gene	photosystem-ii	−	368	1427	1059
trnK-UUU	gene	translation-rna	−	1660	4249	2589
matK	gene	other	−	1955	3491	1536
rps16	gene	ribosomal-protein	−	5120	6284	1164
trnQ-UUG	gene	translation-rna	−	7303	7375	72
psbK	gene	photosystem-ii	+	7699	7885	186
psbI	gene	photosystem-ii	+	8276	8387	111
trnS-GCU	gene	translation-rna	−	8506	8594	88
trnG-UCC	gene	translation-rna	+	9275	10036	761
trnR-UCU	gene	translation-rna	+	10206	10278	72
atpA	gene	atp-synthase	−	10374	11898	1524
atpF	gene	atp-synthase	−	11980	13208	1228
atpH	gene	atp-synthase	−	13563	13809	246
atpI	gene	atp-synthase	−	14796	15540	744
rps2	gene	ribosomal-protein	−	15888	16599	711
rpoC2	gene	rna-polymerase	−	16815	21021	4206
rpoC1	gene	rna-polymerase	−	21175	23997	2822
rpoB	gene	rna-polymerase	−	24023	27236	3213
trnC-GCA	gene	translation-rna	+	28405	28476	71
petN	gene	cytochrome	+	29194	29284	90
psbM	gene	photosystem-ii	−	30328	30433	105
trnD-GUC	gene	translation-rna	−	30959	31033	74
trnY-GUA	gene	translation-rna	−	31146	31230	84
trnE-UUC	gene	translation-rna	−	31289	31362	73
trnT-GGU	gene	translation-rna	+	31937	32009	72
psbD	gene	photosystem-ii	+	33322	34384	1062
psbC	gene	photosystem-ii	+	34331	35753	1422
trnS-UGA	gene	translation-rna	−	35988	36080	92
psbZ	gene	photosystem-ii	+	36399	36588	189
trnG-GCC	gene	translation-rna	+	36859	36930	71
trnfM-CAU	gene	translation-rna	−	37082	37156	74
rps14	gene	ribosomal-protein	−	37305	37608	303
psaB	gene	photosystem-i	−	37735	39940	2205
psaA	gene	photosystem-i	−	39965	42218	2253
ycf3	gene	other	−	42887	44810	1923
trnS-GGA	gene	translation-rna	+	45683	45770	87
rps4	gene	ribosomal-protein	−	46055	46661	606
trnT-UGU	gene	translation-rna	−	47002	47075	73
trnL-UAA	gene	translation-rna	+	47759	48321	562
trnF-GAA	gene	translation-rna	+	48627	48700	73
ndhJ	gene	nad-dehydrogenase	−	49348	49825	477
ndhK	gene	nad-dehydrogenase	−	49932	50610	678
ndhC	gene	nad-dehydrogenase	−	50662	51025	363
trnV-UAC	gene	translation-rna	−	51880	52533	653
trnM-CAU	gene	translation-rna	+	52713	52786	73
atpE	gene	atp-synthase	−	53001	53403	402
atpB	gene	atp-synthase	−	53399	54887	1488
rbcL	gene	other	+	55637	57098	1461
accD	gene	other	+	57827	59294	1467
psaI	gene	photosystem-i	+	59867	59978	111
ycf4	gene	other	+	60411	60966	555
cemA	gene	other	+	61703	62303	600
petA	gene	cytochrome	+	62509	63472	963
psbJ	gene	photosystem-ii	−	64509	64632	123
psbL	gene	photosystem-ii	−	64765	64987	222
psbF	gene	photosystem-ii	−	64905	65025	120
psbE	gene	photosystem-ii	−	65039	65291	252
petL	gene	cytochrome	+	66199	66295	96
petG	gene	cytochrome	+	66470	66584	114
trnW-CCA	gene	translation-rna	−	66702	66776	74
trnP-UGG	gene	translation-rna	−	66945	67019	74
psaJ	gene	photosystem-i	+	67291	67426	135
rpl33	gene	ribosomal-protein	+	67899	68100	201
rps18	gene	ribosomal-protein	+	68274	68580	306
rpl20	gene	ribosomal-protein	−	68816	69203	387
rps12	gene	ribosomal-protein	−	70002	98114	28112
rps12	gene	ribosomal-protein	+	70002	138826	68824
clpP	gene	other	−	70258	72191	1933
psbB	gene	photosystem-ii	+	72657	74184	1527
psbT	gene	photosystem-ii	+	74375	74477	102
psbN	gene	photosystem-ii	−	74551	74683	132
psbH	gene	photosystem-ii	+	74786	75008	222
petB	gene	cytochrome	+	75132	76500	1368
petD	gene	cytochrome	+	76688	77890	1202
rpoA	gene	rna-polymerase	−	78052	79066	1014
rps11	gene	ribosomal-protein	−	79137	79554	417
rpl36	gene	ribosomal-protein	−	79655	79769	114
infA	gene	other	−	79864	80098	234
rps8	gene	ribosomal-protein	−	80217	80628	411
rpl14	gene	ribosomal-protein	−	80797	81166	369
rpl16	gene	ribosomal-protein	−	81292	82519	1227
rps3	gene	ribosomal-protein	−	82673	83336	663
rpl22	gene	ribosomal-protein	−	83337	83793	456
rps19	gene	ribosomal-protein	−	83852	84131	279
rpl2	gene	ribosomal-protein	−	84185	85668	1483
rpl23	gene	ribosomal-protein	−	85686	85968	282
trnI-CAU	gene	translation-rna	−	86127	86201	74
ycf2	gene	other	+	86289	93099	6810
ycf15	gene	other	+	93189	93438	249
trnL-CAA	gene	translation-rna	−	93693	93774	81
ndhB	gene	nad-dehydrogenase	−	94316	96528	2212
rps7	gene	ribosomal-protein	−	96802	97270	468
trnV-GAC	gene	translation-rna	+	99691	99763	72
rrn16	gene	ribosomal-rna	+	99990	101481	1491
trnI-GAU	gene	translation-rna	+	101779	102800	1021
trnA-UGC	gene	translation-rna	+	102864	103747	883
rrn23	gene	ribosomal-rna	+	103916	106729	2813
rrn4.5	gene	ribosomal-rna	+	106827	106930	103
rrn5	gene	ribosomal-rna	+	107177	107298	121
trnR-ACG	gene	translation-rna	+	107532	107606	74
trnN-GUU	gene	translation-rna	−	108152	108224	72
ndhF	gene	nad-dehydrogenase	−	109300	111541	2241
rpl32	gene	ribosomal-protein	+	112061	112238	177
trnL-UAG	gene	translation-rna	+	112674	112754	80
ccsA	gene	other	+	112850	113825	975
ndhD	gene	nad-dehydrogenase	−	114057	115581	1524
psaC	gene	photosystem-i	−	115679	115925	246
ndhE	gene	nad-dehydrogenase	−	116181	116487	306
ndhG	gene	nad-dehydrogenase	−	116717	117248	531
ndhI	gene	nad-dehydrogenase	−	117613	118114	501
ndhA	gene	nad-dehydrogenase	−	118194	120292	2098
ndhH	gene	nad-dehydrogenase	−	120293	121505	1212
rps15	gene	ribosomal-protein	−	121577	121850	273
ycf1	gene	other	−	122061	127707	5646
trnN-GUU	gene	translation-rna	+	127925	127997	72
trnR-ACG	gene	translation-rna	−	128543	128617	74
rrn5	gene	ribosomal-rna	−	128851	128972	121
rrn4.5	gene	ribosomal-rna	−	129219	129322	103
rrn23	gene	ribosomal-rna	−	129420	132233	2813
trnA-UGC	gene	translation-rna	−	132402	133285	883
trnI-GAU	gene	translation-rna	−	133349	134370	1021
ycf68	gene	other	−	133975	134215	240
rrn16	gene	ribosomal-rna	−	134668	136159	1491
trnV-GAC	gene	translation-rna	−	136386	136458	72
rps7	gene	ribosomal-protein	+	138879	139347	468
ndhB	gene	nad-dehydrogenase	+	139621	141833	2212
trnL-CAA	gene	translation-rna	+	142375	142456	81
ycf15	gene	other	−	142711	142960	249
ycf2	gene	other	−	143050	149860	6810
trnI-CAU	gene	translation-rna	+	149948	150022	74
rpl23	gene	ribosomal-protein	+	150181	150463	282
rpl2	gene	ribosomal-protein	+	150481	151964	1483

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomePQ059322.1DNA · accDPQ059322DNA · atpBPQ059322DNA · matKPQ059322DNA · ndhFPQ059322DNA · psbAPQ059322DNA · rbcLPQ059322DNA · rps12PQ059322DNA · ycf1PQ059322