Coordinate-aware organelle record

Scutellaria nana chloroplast genome

Available MW420969.1 152,529 bp 132 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

132 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	2	76	74
psbA	gene	photosystem-ii	−	363	1422	1059
trnK-UUU	gene	translation-rna	−	1666	4256	2590
matK	gene	other	−	1957	3493	1536
rps16	gene	ribosomal-protein	−	5162	6331	1169
trnQ-UUC	gene	translation-rna	−	7456	7528	72
psbK	gene	photosystem-ii	+	7852	8038	186
psbI	gene	photosystem-ii	+	8429	8540	111
trnS-GCU	gene	translation-rna	−	8656	8744	88
trnG-CGA	gene	translation-rna	+	9415	10176	761
trnR-UCU	gene	translation-rna	+	10350	10422	72
atpA	gene	atp-synthase	−	10518	12042	1524
atpF	gene	atp-synthase	−	12115	13342	1227
atpH	gene	atp-synthase	−	13701	13947	246
atpI	gene	atp-synthase	−	14944	15688	744
rps2	gene	ribosomal-protein	−	16037	16748	711
rpoC2	gene	rna-polymerase	−	16964	21170	4206
rpoC1	gene	rna-polymerase	−	21324	24154	2830
rpoB	gene	rna-polymerase	−	24180	27393	3213
trnC-GCA	gene	translation-rna	+	28554	28625	71
petN	gene	cytochrome	+	29338	29428	90
psbM	gene	photosystem-ii	−	30432	30537	105
trnD-GUC	gene	translation-rna	−	31062	31136	74
trnY-GUA	gene	translation-rna	−	31249	31333	84
trnE-UUC	gene	translation-rna	−	31392	31465	73
trnT-GGU	gene	translation-rna	+	32047	32119	72
psbD	gene	photosystem-ii	+	33422	34484	1062
psbC	gene	photosystem-ii	+	34431	35853	1422
trnS-UCA	gene	translation-rna	−	36096	36189	93
psbZ	gene	photosystem-ii	+	36510	36699	189
trnG-GCC	gene	translation-rna	+	36970	37041	71
trnfM-CAU	gene	translation-rna	−	37195	37269	74
rps14	gene	ribosomal-protein	−	37418	37721	303
psaB	gene	photosystem-i	−	37846	40051	2205
psaA	gene	photosystem-i	−	40076	42329	2253
ycf3	gene	other	−	43002	44943	1941
trnS-GGA	gene	translation-rna	+	45819	45906	87
rps4	gene	ribosomal-protein	−	46191	46797	606
trnT-UGU	gene	translation-rna	−	47135	47208	73
trnL-UAA	gene	translation-rna	+	47882	48452	570
trnF-GAA	gene	translation-rna	+	48756	48829	73
ndhJ	gene	nad-dehydrogenase	−	49483	49960	477
ndhK	gene	nad-dehydrogenase	−	50068	50746	678
ndhC	gene	nad-dehydrogenase	−	50798	51161	363
trnV-UAC	gene	translation-rna	−	52158	52811	653
trnM-CAU	gene	translation-rna	+	52991	53064	73
atpE	gene	atp-synthase	−	53273	53675	402
atpB	gene	atp-synthase	−	53671	55159	1488
rbcL	gene	other	+	55932	57375	1443
accD	gene	other	+	58104	59571	1467
psaI	gene	photosystem-i	+	60287	60398	111
ycf4	gene	other	+	60823	61378	555
cemA	gene	other	+	62063	62723	660
petA	gene	cytochrome	+	62929	63892	963
pabJ	gene	other	−	64921	65044	123
psbL	gene	photosystem-ii	−	65178	65295	117
psbF	gene	photosystem-ii	−	65318	65438	120
psbE	gene	photosystem-ii	−	65452	65704	252
petL	gene	cytochrome	+	66611	66707	96
petG	gene	cytochrome	+	66882	66996	114
trnW-CCA	gene	translation-rna	−	67114	67188	74
trnP-UGG	gene	translation-rna	−	67357	67431	74
psbJ	gene	photosystem-ii	+	67703	67838	135
rpl33	gene	ribosomal-protein	+	68309	68510	201
rps18	gene	ribosomal-protein	+	68684	68990	306
rpl20	gene	ribosomal-protein	−	69226	69613	387
rps12	gene	ribosomal-protein	−	70397	98526	28129
rps12	gene	ribosomal-protein	+	70397	139296	68899
clpP	gene	other	−	70665	72598	1933
psbB	gene	photosystem-ii	+	73071	74598	1527
psbT	gene	photosystem-ii	+	74789	74891	102
psbN	gene	photosystem-ii	−	74964	75096	132
psbH	gene	photosystem-ii	+	75199	75421	222
petB	gene	cytochrome	+	75545	76914	1369
petD	gene	cytochrome	+	77102	78304	1202
rpoA	gene	rna-polymerase	−	78466	79480	1014
rps11	gene	ribosomal-protein	−	79551	79968	417
rpl36	gene	ribosomal-protein	−	80069	80183	114
infA	gene	other	−	80278	80512	234
rps8	gene	ribosomal-protein	−	80631	81042	411
rpl14	gene	ribosomal-protein	−	81209	81578	369
rpl16	gene	ribosomal-protein	−	81704	82931	1227
rps3	gene	ribosomal-protein	−	83085	83748	663
rpl22	gene	ribosomal-protein	−	83749	84205	456
rps19	gene	ribosomal-protein	−	84264	84543	279
rpl2	gene	ribosomal-protein	−	84597	86080	1483
rpl23	gene	ribosomal-protein	−	86098	86380	282
trnI-CAU	gene	translation-rna	−	86539	86613	74
ycf2	gene	other	+	86701	93511	6810
ycf15	gene	other	+	93652	93850	198
trnL-CAA	gene	translation-rna	−	94105	94186	81
ndhB	gene	nad-dehydrogenase	−	94728	96940	2212
rps7	gene	ribosomal-protein	−	97214	97682	468
trnV-GAC	gene	translation-rna	+	100103	100175	72
rrn16	gene	ribosomal-rna	+	100402	101893	1491
trnI-GAU	gene	translation-rna	+	102191	103211	1020
trnA-UGC	gene	translation-rna	+	103276	104160	884
rrn23	gene	ribosomal-rna	+	104329	107142	2813
rrn4.5	gene	ribosomal-rna	+	107240	107343	103
rrn5	gene	ribosomal-rna	+	107590	107711	121
trnR-ACG	gene	translation-rna	+	107945	108019	74
trnN-GUU	gene	translation-rna	+	108566	108638	72
ndhF	gene	nad-dehydrogenase	−	109714	111955	2241
rpl32	gene	ribosomal-protein	+	112478	112655	177
trnL-UAG	gene	translation-rna	+	113074	113154	80
ccsA	gene	other	+	113251	114226	975
ndhD	gene	nad-dehydrogenase	−	114458	115979	1521
psaC	gene	photosystem-i	−	116080	116326	246
ndhE	gene	nad-dehydrogenase	−	116582	116888	306
ndhG	gene	nad-dehydrogenase	−	117097	117628	531
ndhI	gene	nad-dehydrogenase	−	117993	118494	501
ndhA	gene	nad-dehydrogenase	−	118574	120667	2093
ndhH	gene	nad-dehydrogenase	−	120668	121850	1182
rps15	gene	ribosomal-protein	−	121952	122225	273
ycf1	gene	other	−	122514	128064	5550
trnN-GUU	gene	translation-rna	+	128393	128465	72
trnR-ACG	gene	translation-rna	−	129012	129086	74
rrn5	gene	ribosomal-rna	−	129320	129441	121
rrn4.5	gene	ribosomal-rna	−	129688	129791	103
rrn23	gene	ribosomal-rna	−	129889	132702	2813
trnA-UGC	gene	translation-rna	−	132871	133755	884
trnI-GAU	gene	translation-rna	−	133820	134840	1020
rrn16	gene	ribosomal-rna	−	135138	136629	1491
trnV-GAC	gene	translation-rna	−	136856	136928	72
rps7	gene	ribosomal-protein	+	139349	139817	468
ndhB	gene	nad-dehydrogenase	+	140091	142303	2212
trnL-CAA	gene	translation-rna	+	142845	142926	81
ycf15	gene	other	−	143181	143379	198
ycf2	gene	other	−	143520	150330	6810
trnI-CAU	gene	translation-rna	+	150418	150492	74
rpl23	gene	ribosomal-protein	+	150651	150933	282
rpl2	gene	ribosomal-protein	+	150951	152434	1483

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomeMW420969.1DNA · accDMW420969DNA · atpBMW420969DNA · matKMW420969DNA · ndhFMW420969DNA · psbAMW420969DNA · rbcLMW420969DNA · rps12MW420969DNA · ycf1MW420969