Coordinate-aware organelle record

Scutellaria nuristanica chloroplast genome

Available PQ059232.1 151,907 bp 133 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

133 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	3	77	74
psbA	gene	photosystem-ii	−	376	1429	1053
trnK-UUU	gene	translation-rna	−	1669	4263	2594
matK	gene	other	−	1958	3503	1545
rps16	gene	ribosomal-protein	−	5156	6331	1175
trnQ-UUG	gene	translation-rna	−	7442	7514	72
psbK	gene	photosystem-ii	+	7838	8024	186
psbI	gene	photosystem-ii	+	8416	8527	111
trnS-GCU	gene	translation-rna	−	8632	8720	88
trnG-UCC	gene	translation-rna	+	9414	10167	753
trnR-UCU	gene	translation-rna	+	10332	10404	72
atpA	gene	atp-synthase	−	10500	12024	1524
atpF	gene	atp-synthase	−	12106	13336	1230
atpH	gene	atp-synthase	−	13706	13952	246
atpI	gene	atp-synthase	−	14951	15695	744
rps2	gene	ribosomal-protein	−	16041	16878	837
rpoC2	gene	rna-polymerase	−	16968	21168	4200
rpoC1	gene	rna-polymerase	−	21322	24150	2828
rpoB	gene	rna-polymerase	−	24176	27389	3213
trnC-GCA	gene	translation-rna	+	28563	28634	71
petN	gene	cytochrome	+	29363	29453	90
psbM	gene	photosystem-ii	−	30361	30475	114
trnD-GUC	gene	translation-rna	−	31005	31079	74
trnY-GUA	gene	translation-rna	−	31192	31276	84
trnE-UUC	gene	translation-rna	−	31335	31408	73
trnT-GGU	gene	translation-rna	+	31979	32051	72
psbD	gene	photosystem-ii	+	33361	34423	1062
psbC	gene	photosystem-ii	+	34370	35792	1422
trnS-UGA	gene	translation-rna	−	36030	36122	92
psbZ	gene	photosystem-ii	+	36441	36630	189
trnG-GCC	gene	translation-rna	+	36901	36972	71
trnfM-CAU	gene	translation-rna	−	37116	37190	74
rps14	gene	ribosomal-protein	−	37339	37642	303
psaB	gene	photosystem-i	−	37769	39974	2205
psaA	gene	photosystem-i	−	39999	42252	2253
ycf3	gene	other	−	42950	44878	1928
trnS-GGA	gene	translation-rna	+	45774	45861	87
rps4	gene	ribosomal-protein	−	46144	46750	606
trnT-UGU	gene	translation-rna	−	47081	47154	73
trnL-UAA	gene	translation-rna	+	47845	48411	566
trnF-GAA	gene	translation-rna	+	48716	48789	73
ndhJ	gene	nad-dehydrogenase	−	49438	49915	477
ndhK	gene	nad-dehydrogenase	−	50023	50701	678
ndhC	gene	nad-dehydrogenase	−	50753	51116	363
trnV-UAC	gene	translation-rna	−	52095	52754	659
trnM-CAU	gene	translation-rna	+	52934	53007	73
atpE	gene	atp-synthase	−	53215	53617	402
atpB	gene	atp-synthase	−	53613	55110	1497
rbcL	gene	other	+	55853	57317	1464
accD	gene	other	+	58044	59535	1491
psaI	gene	photosystem-i	+	59771	59882	111
ycf4	gene	other	+	60315	60870	555
cemA	gene	other	+	61493	62093	600
petA	gene	cytochrome	+	62299	63262	963
psbJ	gene	photosystem-ii	−	64273	64396	123
psbL	gene	photosystem-ii	−	64529	64751	222
psbF	gene	photosystem-ii	−	64669	64789	120
psbE	gene	photosystem-ii	−	64803	65055	252
petL	gene	cytochrome	+	65975	66071	96
petG	gene	cytochrome	+	66246	66360	114
trnW-CCA	gene	translation-rna	−	66468	66542	74
trnP-UGG	gene	translation-rna	−	66712	66786	74
psaJ	gene	photosystem-i	+	67058	67193	135
rpl33	gene	ribosomal-protein	+	67671	67872	201
rps18	gene	ribosomal-protein	+	68047	68353	306
rpl20	gene	ribosomal-protein	−	68593	68980	387
rps12	gene	ribosomal-protein	−	69774	97872	28098
rps12	gene	ribosomal-protein	+	69774	138663	68889
clpP	gene	other	−	70029	71961	1932
psbB	gene	photosystem-ii	+	72414	73941	1527
psbT	gene	photosystem-ii	+	74121	74229	108
psbN	gene	photosystem-ii	−	74289	74421	132
psbH	gene	photosystem-ii	+	74524	74746	222
petB	gene	cytochrome	+	74870	76245	1375
petD	gene	cytochrome	+	76433	77644	1211
rpoA	gene	rna-polymerase	−	77996	78815	819
rps11	gene	ribosomal-protein	−	78886	79303	417
rpl36	gene	ribosomal-protein	−	79404	79518	114
infA	gene	other	−	79613	79847	234
rps8	gene	ribosomal-protein	−	79969	80380	411
rpl14	gene	ribosomal-protein	−	80542	80911	369
rpl16	gene	ribosomal-protein	−	81037	82266	1229
rps3	gene	ribosomal-protein	−	82420	83083	663
rpl22	gene	ribosomal-protein	−	83084	83540	456
rps19	gene	ribosomal-protein	−	83599	83878	279
rpl2	gene	ribosomal-protein	−	83932	85415	1483
rpl23	gene	ribosomal-protein	−	85433	85715	282
trnI-CAU	gene	translation-rna	−	85874	85948	74
ycf2	gene	other	+	86036	92852	6816
ycf15	gene	other	+	92942	93191	249
trnL-CAA	gene	translation-rna	−	93451	93532	81
ndhB	gene	nad-dehydrogenase	−	94074	96286	2212
rps7	gene	ribosomal-protein	−	96560	97028	468
trnV-GAC	gene	translation-rna	+	99444	99516	72
rrn16	gene	ribosomal-rna	+	99738	101229	1491
trnI-GAU	gene	translation-rna	+	101527	102548	1021
trnA-UGC	gene	translation-rna	+	102612	103500	888
rrn23	gene	ribosomal-rna	+	103669	106482	2813
rrn4.5	gene	ribosomal-rna	+	106580	106683	103
rrn5	gene	ribosomal-rna	+	106930	107051	121
trnR-ACG	gene	translation-rna	+	107285	107359	74
trnN-GUU	gene	translation-rna	−	107914	107986	72
ndhF	gene	nad-dehydrogenase	−	109010	111302	2292
rpl32	gene	ribosomal-protein	+	111819	111996	177
trnL-UAG	gene	translation-rna	+	112431	112511	80
ccsA	gene	other	+	112510	113581	1071
ndhD	gene	nad-dehydrogenase	−	113821	115324	1503
psaC	gene	photosystem-i	−	115463	115709	246
ndhE	gene	nad-dehydrogenase	−	115964	116270	306
ndhG	gene	nad-dehydrogenase	−	116494	117025	531
ndhI	gene	nad-dehydrogenase	−	117373	117874	501
ndhA	gene	nad-dehydrogenase	−	117954	120063	2109
ndhH	gene	nad-dehydrogenase	−	120064	121276	1212
rps15	gene	ribosomal-protein	−	121342	121615	273
ycf1	gene	other	−	121879	127540	5661
trnN-GUU	gene	translation-rna	+	127758	127830	72
trnR-ACG	gene	translation-rna	−	128385	128459	74
rrn5	gene	ribosomal-rna	−	128693	128814	121
rrn4.5	gene	ribosomal-rna	−	129061	129164	103
rrn23	gene	ribosomal-rna	−	129262	132075	2813
trnA-UGC	gene	translation-rna	−	132244	133132	888
trnI-GAU	gene	translation-rna	−	133196	134217	1021
ycf68	gene	other	−	133768	134062	294
rrn16	gene	ribosomal-rna	−	134515	136006	1491
trnV-GAC	gene	translation-rna	−	136228	136300	72
rps7	gene	ribosomal-protein	+	138716	139184	468
ndhB	gene	nad-dehydrogenase	+	139458	141670	2212
trnL-CAA	gene	translation-rna	+	142212	142293	81
ycf15	gene	other	−	142553	142802	249
ycf2	gene	other	−	142892	149708	6816
trnI-CAU	gene	translation-rna	+	149796	149870	74
rpl23	gene	ribosomal-protein	+	150029	150311	282
rpl2	gene	ribosomal-protein	+	150329	151812	1483

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomePQ059232.1DNA · accDPQ059232DNA · atpBPQ059232DNA · matKPQ059232DNA · ndhFPQ059232DNA · psbAPQ059232DNA · rbcLPQ059232DNA · rps12PQ059232DNA · ycf1PQ059232