Coordinate-aware organelle record

Scutellaria oligodonta chloroplast genome

Available PQ059335.1 151,812 bp 133 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

133 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	3	77	74
psbA	gene	photosystem-ii	−	363	1422	1059
trnK-UUU	gene	translation-rna	−	1663	4245	2582
matK	gene	other	−	1953	3480	1527
rps16	gene	ribosomal-protein	−	5145	6306	1161
trnQ-UUG	gene	translation-rna	−	7052	7124	72
psbK	gene	photosystem-ii	+	7448	7634	186
psbI	gene	photosystem-ii	+	8024	8135	111
trnS-GCU	gene	translation-rna	−	8253	8341	88
trnG-UCC	gene	translation-rna	+	9044	9797	753
trnR-UCU	gene	translation-rna	+	9971	10043	72
atpA	gene	atp-synthase	−	10139	11663	1524
atpF	gene	atp-synthase	−	11744	12974	1230
atpH	gene	atp-synthase	−	13336	13582	246
atpI	gene	atp-synthase	−	14570	15314	744
rps2	gene	ribosomal-protein	−	15659	16370	711
rpoC2	gene	rna-polymerase	−	16584	20790	4206
rpoC1	gene	rna-polymerase	−	20944	23774	2830
rpoB	gene	rna-polymerase	−	23800	27013	3213
trnC-GCA	gene	translation-rna	+	28164	28235	71
petN	gene	cytochrome	+	28948	29038	90
psbM	gene	photosystem-ii	−	30132	30237	105
trnD-GUC	gene	translation-rna	−	30773	30847	74
trnY-GUA	gene	translation-rna	−	30960	31044	84
trnE-UUC	gene	translation-rna	−	31103	31176	73
trnT-GGU	gene	translation-rna	+	31744	31816	72
psbD	gene	photosystem-ii	+	33121	34183	1062
psbC	gene	photosystem-ii	+	34130	35552	1422
trnS-UGA	gene	translation-rna	−	35788	35880	92
psbZ	gene	photosystem-ii	+	36195	36384	189
trnG-GCC	gene	translation-rna	+	36661	36732	71
trnfM-CAU	gene	translation-rna	−	36879	36953	74
rps14	gene	ribosomal-protein	−	37107	37410	303
psaB	gene	photosystem-i	−	37538	39743	2205
psaA	gene	photosystem-i	−	39768	42021	2253
ycf3	gene	other	−	42713	44637	1924
trnS-GGA	gene	translation-rna	+	45519	45606	87
rps4	gene	ribosomal-protein	−	45881	46487	606
trnT-UGU	gene	translation-rna	−	46827	46900	73
trnL-UAA	gene	translation-rna	+	47580	48140	560
trnF-GAA	gene	translation-rna	+	48442	48515	73
ndhJ	gene	nad-dehydrogenase	−	49153	49630	477
ndhK	gene	nad-dehydrogenase	−	49738	50416	678
ndhC	gene	nad-dehydrogenase	−	50469	50832	363
trnV-UAC	gene	translation-rna	−	51817	52470	653
trnM-CAU	gene	translation-rna	+	52658	52731	73
atpE	gene	atp-synthase	−	52924	53326	402
atpB	gene	atp-synthase	−	53322	54819	1497
rbcL	gene	other	+	55569	57033	1464
accD	gene	other	+	57746	59225	1479
psaI	gene	photosystem-i	+	59931	60042	111
ycf4	gene	other	+	60467	61022	555
cemA	gene	other	+	61770	62370	600
petA	gene	cytochrome	+	62576	63539	963
psbJ	gene	photosystem-ii	−	64545	64668	123
psbL	gene	photosystem-ii	−	64801	64918	117
psbF	gene	photosystem-ii	−	64941	65061	120
psbE	gene	photosystem-ii	−	65075	65327	252
petL	gene	cytochrome	+	66204	66300	96
petG	gene	cytochrome	+	66475	66589	114
trnW-CCA	gene	translation-rna	−	66707	66781	74
trnP-UGG	gene	translation-rna	−	66950	67024	74
psaJ	gene	photosystem-i	+	67232	67430	198
rpl33	gene	ribosomal-protein	+	67907	68108	201
rps18	gene	ribosomal-protein	+	68282	68588	306
rpl20	gene	ribosomal-protein	−	68822	69209	387
rps12	gene	ribosomal-protein	−	69992	98061	28069
rps12	gene	ribosomal-protein	+	69992	138580	68588
clpP	gene	other	−	70259	72187	1928
psbB	gene	photosystem-ii	+	72638	74165	1527
psbT	gene	photosystem-ii	+	74356	74464	108
psbN	gene	photosystem-ii	−	74524	74656	132
psbH	gene	photosystem-ii	+	74759	74981	222
petB	gene	cytochrome	+	75105	76475	1370
petD	gene	cytochrome	+	76657	77871	1214
rpoA	gene	rna-polymerase	−	78225	79026	801
rps11	gene	ribosomal-protein	−	79097	79514	417
rpl36	gene	ribosomal-protein	−	79615	79729	114
infA	gene	other	−	79823	80057	234
rps8	gene	ribosomal-protein	−	80180	80591	411
rpl14	gene	ribosomal-protein	−	80742	81111	369
rpl16	gene	ribosomal-protein	−	81237	82471	1234
rps3	gene	ribosomal-protein	−	82626	83289	663
rpl22	gene	ribosomal-protein	−	83290	83746	456
rps19	gene	ribosomal-protein	−	83805	84084	279
rpl2	gene	ribosomal-protein	−	84138	85620	1482
rpl23	gene	ribosomal-protein	−	85638	85920	282
trnI-CAU	gene	translation-rna	−	86079	86153	74
ycf2	gene	other	+	86241	93042	6801
ycf15	gene	other	+	93132	93381	249
trnL-CAA	gene	translation-rna	−	93640	93721	81
ndhB	gene	nad-dehydrogenase	−	94263	96475	2212
rps7	gene	ribosomal-protein	−	96749	97217	468
trnV-GAC	gene	translation-rna	+	99632	99704	72
rrn16	gene	ribosomal-rna	+	99930	101421	1491
trnI-GAU	gene	translation-rna	+	101719	102741	1022
trnA-UGC	gene	translation-rna	+	102805	103693	888
rrn23	gene	ribosomal-rna	+	103862	106674	2812
rrn4.5	gene	ribosomal-rna	+	106772	106875	103
rrn5	gene	ribosomal-rna	+	107122	107243	121
trnR-ACG	gene	translation-rna	+	107477	107551	74
trnN-GUU	gene	translation-rna	−	108099	108171	72
ndhF	gene	nad-dehydrogenase	−	109227	111489	2262
rpl32	gene	ribosomal-protein	+	111816	111993	177
trnL-UAG	gene	translation-rna	+	112439	112519	80
ccsA	gene	other	+	112607	113582	975
ndhD	gene	nad-dehydrogenase	−	113838	115368	1530
psaC	gene	photosystem-i	−	115468	115714	246
ndhE	gene	nad-dehydrogenase	−	115969	116275	306
ndhG	gene	nad-dehydrogenase	−	116491	117022	531
ndhI	gene	nad-dehydrogenase	−	117388	117889	501
ndhA	gene	nad-dehydrogenase	−	117974	120096	2122
ndhH	gene	nad-dehydrogenase	−	120097	121309	1212
rps15	gene	ribosomal-protein	−	121375	121648	273
ycf1	gene	other	−	121845	127461	5616
trnN-GUU	gene	translation-rna	+	127679	127751	72
trnR-ACG	gene	translation-rna	−	128299	128373	74
rrn5	gene	ribosomal-rna	−	128607	128728	121
rrn4.5	gene	ribosomal-rna	−	128975	129078	103
rrn23	gene	ribosomal-rna	−	129176	131988	2812
trnA-UGC	gene	translation-rna	−	132157	133045	888
trnI-GAU	gene	translation-rna	−	133109	134131	1022
ycf68	gene	other	−	133682	133976	294
rrn16	gene	ribosomal-rna	−	134429	135920	1491
trnV-GAC	gene	translation-rna	−	136146	136218	72
rps7	gene	ribosomal-protein	+	138633	139101	468
ndhB	gene	nad-dehydrogenase	+	139375	141587	2212
trnL-CAA	gene	translation-rna	+	142129	142210	81
ycf15	gene	other	−	142469	142718	249
ycf2	gene	other	−	142808	149609	6801
trnI-CAU	gene	translation-rna	+	149697	149771	74
rpl23	gene	ribosomal-protein	+	149930	150212	282
rpl2	gene	ribosomal-protein	+	150230	151712	1482

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomePQ059335.1DNA · accDPQ059335DNA · atpBPQ059335DNA · matKPQ059335DNA · ndhFPQ059335DNA · psbAPQ059335DNA · rbcLPQ059335DNA · rps12PQ059335DNA · ycf1PQ059335