Coordinate-aware organelle record

Scutellaria omeiensis var. serratifolia chloroplast genome

Available PQ059324.1 152,055 bp 133 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

133 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	2	76	74
psbA	gene	photosystem-ii	−	368	1427	1059
trnK-UUU	gene	translation-rna	−	1668	4257	2589
matK	gene	other	−	1963	3499	1536
rps16	gene	ribosomal-protein	−	5129	6298	1169
trnQ-UUG	gene	translation-rna	−	7317	7389	72
psbK	gene	photosystem-ii	+	7713	7899	186
psbI	gene	photosystem-ii	+	8291	8402	111
trnS-GCU	gene	translation-rna	−	8519	8607	88
trnG-UCC	gene	translation-rna	+	9293	10054	761
trnR-UCU	gene	translation-rna	+	10224	10296	72
atpA	gene	atp-synthase	−	10392	11916	1524
atpF	gene	atp-synthase	−	11997	13225	1228
atpH	gene	atp-synthase	−	13590	13836	246
atpI	gene	atp-synthase	−	14823	15567	744
rps2	gene	ribosomal-protein	−	15915	16626	711
rpoC2	gene	rna-polymerase	−	16842	21048	4206
rpoC1	gene	rna-polymerase	−	21202	24024	2822
rpoB	gene	rna-polymerase	−	24050	27263	3213
trnC-GCA	gene	translation-rna	+	28431	28502	71
petN	gene	cytochrome	+	29213	29303	90
psbM	gene	photosystem-ii	−	30295	30400	105
trnD-GUC	gene	translation-rna	−	30926	31000	74
trnY-GUA	gene	translation-rna	−	31113	31197	84
trnE-UUC	gene	translation-rna	−	31256	31329	73
trnT-GGU	gene	translation-rna	+	31904	31976	72
psbD	gene	photosystem-ii	+	33281	34343	1062
psbC	gene	photosystem-ii	+	34290	35712	1422
trnS-UGA	gene	translation-rna	−	35947	36039	92
psbZ	gene	photosystem-ii	+	36358	36547	189
trnG-GCC	gene	translation-rna	+	36818	36889	71
trnfM-CAU	gene	translation-rna	−	37033	37107	74
rps14	gene	ribosomal-protein	−	37256	37559	303
psaB	gene	photosystem-i	−	37686	39891	2205
psaA	gene	photosystem-i	−	39916	42169	2253
ycf3	gene	other	−	42838	44761	1923
trnS-GGA	gene	translation-rna	+	45645	45732	87
rps4	gene	ribosomal-protein	−	46017	46623	606
trnT-UGU	gene	translation-rna	−	46964	47037	73
trnL-UAA	gene	translation-rna	+	47710	48271	561
trnF-GAA	gene	translation-rna	+	48577	48650	73
ndhJ	gene	nad-dehydrogenase	−	49298	49775	477
ndhK	gene	nad-dehydrogenase	−	49882	50560	678
ndhC	gene	nad-dehydrogenase	−	50612	50975	363
trnV-UAC	gene	translation-rna	−	51832	52485	653
trnM-CAU	gene	translation-rna	+	52665	52738	73
atpE	gene	atp-synthase	−	52953	53355	402
atpB	gene	atp-synthase	−	53351	54839	1488
rbcL	gene	other	+	55590	57051	1461
accD	gene	other	+	57787	59254	1467
psaI	gene	photosystem-i	+	59811	59922	111
ycf4	gene	other	+	60355	60910	555
cemA	gene	other	+	61647	62247	600
petA	gene	cytochrome	+	62453	63416	963
psbJ	gene	photosystem-ii	−	64449	64572	123
psbL	gene	photosystem-ii	−	64705	64927	222
psbF	gene	photosystem-ii	−	64845	64965	120
psbE	gene	photosystem-ii	−	64979	65231	252
petL	gene	cytochrome	+	66139	66235	96
petG	gene	cytochrome	+	66410	66524	114
trnW-CCA	gene	translation-rna	−	66642	66716	74
trnP-UGG	gene	translation-rna	−	66885	66959	74
psaJ	gene	photosystem-i	+	67231	67366	135
rpl33	gene	ribosomal-protein	+	67839	68040	201
rps18	gene	ribosomal-protein	+	68214	68520	306
rpl20	gene	ribosomal-protein	−	68756	69143	387
rps12	gene	ribosomal-protein	−	69931	98057	28126
rps12	gene	ribosomal-protein	+	69931	138822	68891
clpP	gene	other	−	70199	72133	1934
psbB	gene	photosystem-ii	+	72599	74126	1527
psbT	gene	photosystem-ii	+	74317	74419	102
psbN	gene	photosystem-ii	−	74493	74625	132
psbH	gene	photosystem-ii	+	74728	74950	222
petB	gene	cytochrome	+	75074	76443	1369
petD	gene	cytochrome	+	76631	77833	1202
rpoA	gene	rna-polymerase	−	77995	79009	1014
rps11	gene	ribosomal-protein	−	79080	79497	417
rpl36	gene	ribosomal-protein	−	79598	79712	114
infA	gene	other	−	79807	80041	234
rps8	gene	ribosomal-protein	−	80160	80571	411
rpl14	gene	ribosomal-protein	−	80740	81109	369
rpl16	gene	ribosomal-protein	−	81235	82462	1227
rps3	gene	ribosomal-protein	−	82616	83279	663
rpl22	gene	ribosomal-protein	−	83280	83736	456
rps19	gene	ribosomal-protein	−	83795	84074	279
rpl2	gene	ribosomal-protein	−	84128	85611	1483
rpl23	gene	ribosomal-protein	−	85629	85911	282
trnI-CAU	gene	translation-rna	−	86070	86144	74
ycf2	gene	other	+	86232	93042	6810
ycf15	gene	other	+	93132	93381	249
trnL-CAA	gene	translation-rna	−	93636	93717	81
ndhB	gene	nad-dehydrogenase	−	94259	96471	2212
rps7	gene	ribosomal-protein	−	96745	97213	468
trnV-GAC	gene	translation-rna	+	99634	99706	72
rrn16	gene	ribosomal-rna	+	99933	101424	1491
trnI-GAU	gene	translation-rna	+	101722	102743	1021
trnA-UGC	gene	translation-rna	+	102807	103689	882
rrn23	gene	ribosomal-rna	+	103858	106671	2813
rrn4.5	gene	ribosomal-rna	+	106769	106872	103
rrn5	gene	ribosomal-rna	+	107119	107240	121
trnR-ACG	gene	translation-rna	+	107474	107548	74
trnN-GUU	gene	translation-rna	−	108094	108166	72
ndhF	gene	nad-dehydrogenase	−	109242	111483	2241
rpl32	gene	ribosomal-protein	+	112003	112180	177
trnL-UAG	gene	translation-rna	+	112623	112703	80
ccsA	gene	other	+	112799	113774	975
ndhD	gene	nad-dehydrogenase	−	114006	115530	1524
psaC	gene	photosystem-i	−	115628	115874	246
ndhE	gene	nad-dehydrogenase	−	116130	116436	306
ndhG	gene	nad-dehydrogenase	−	116666	117197	531
ndhI	gene	nad-dehydrogenase	−	117561	118062	501
ndhA	gene	nad-dehydrogenase	−	118142	120234	2092
ndhH	gene	nad-dehydrogenase	−	120235	121447	1212
rps15	gene	ribosomal-protein	−	121519	121792	273
ycf1	gene	other	−	122058	127704	5646
trnN-GUU	gene	translation-rna	+	127922	127994	72
trnR-ACG	gene	translation-rna	−	128540	128614	74
rrn5	gene	ribosomal-rna	−	128848	128969	121
rrn4.5	gene	ribosomal-rna	−	129216	129319	103
rrn23	gene	ribosomal-rna	−	129417	132230	2813
trnA-UGC	gene	translation-rna	−	132399	133281	882
trnI-GAU	gene	translation-rna	−	133345	134366	1021
ycf68	gene	other	−	133971	134211	240
rrn16	gene	ribosomal-rna	−	134664	136155	1491
trnV-GAC	gene	translation-rna	−	136382	136454	72
rps7	gene	ribosomal-protein	+	138875	139343	468
ndhB	gene	nad-dehydrogenase	+	139617	141829	2212
trnL-CAA	gene	translation-rna	+	142371	142452	81
ycf15	gene	other	−	142707	142956	249
ycf2	gene	other	−	143046	149856	6810
trnI-CAU	gene	translation-rna	+	149944	150018	74
rpl23	gene	ribosomal-protein	+	150177	150459	282
rpl2	gene	ribosomal-protein	+	150477	151960	1483

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomePQ059324.1DNA · accDPQ059324DNA · atpBPQ059324DNA · matKPQ059324DNA · ndhFPQ059324DNA · psbAPQ059324DNA · rbcLPQ059324DNA · rps12PQ059324DNA · ycf1PQ059324