Coordinate-aware organelle record

Scutellaria orientalis subsp. bornmuelleri chloroplast genome

Available PQ059223.1 151,798 bp 133 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

133 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	3	77	74
psbA	gene	photosystem-ii	−	373	1432	1059
trnK-UUU	gene	translation-rna	−	1673	4255	2582
matK	gene	other	−	1963	3490	1527
rps16	gene	ribosomal-protein	−	5156	6317	1161
trnQ-UUG	gene	translation-rna	−	7052	7124	72
psbK	gene	photosystem-ii	+	7448	7634	186
psbI	gene	photosystem-ii	+	8023	8134	111
trnS-GCU	gene	translation-rna	−	8251	8339	88
trnG-UCC	gene	translation-rna	+	9041	9798	757
trnR-UCU	gene	translation-rna	+	9972	10044	72
atpA	gene	atp-synthase	−	10140	11664	1524
atpF	gene	atp-synthase	−	11745	12975	1230
atpH	gene	atp-synthase	−	13330	13576	246
atpI	gene	atp-synthase	−	14563	15307	744
rps2	gene	ribosomal-protein	−	15652	16363	711
rpoC2	gene	rna-polymerase	−	16578	20784	4206
rpoC1	gene	rna-polymerase	−	20938	23775	2837
rpoB	gene	rna-polymerase	−	23801	27014	3213
trnC-GCA	gene	translation-rna	+	28174	28245	71
petN	gene	cytochrome	+	28960	29050	90
psbM	gene	photosystem-ii	−	30092	30197	105
trnD-GUC	gene	translation-rna	−	30722	30796	74
trnY-GUA	gene	translation-rna	−	30909	30993	84
trnE-UUC	gene	translation-rna	−	31052	31125	73
trnT-GGU	gene	translation-rna	+	31700	31772	72
psbD	gene	photosystem-ii	+	33077	34139	1062
psbC	gene	photosystem-ii	+	34086	35508	1422
trnS-UGA	gene	translation-rna	−	35743	35835	92
psbZ	gene	photosystem-ii	+	36150	36339	189
trnG-GCC	gene	translation-rna	+	36616	36687	71
trnfM-CAU	gene	translation-rna	−	36835	36909	74
rps14	gene	ribosomal-protein	−	37058	37361	303
psaB	gene	photosystem-i	−	37489	39694	2205
psaA	gene	photosystem-i	−	39719	41972	2253
ycf3	gene	other	−	42678	44602	1924
trnS-GGA	gene	translation-rna	+	45484	45571	87
rps4	gene	ribosomal-protein	−	45846	46452	606
trnT-UGU	gene	translation-rna	−	46793	46866	73
trnL-UAA	gene	translation-rna	+	47546	48106	560
trnF-GAA	gene	translation-rna	+	48406	48479	73
ndhJ	gene	nad-dehydrogenase	−	49127	49604	477
ndhK	gene	nad-dehydrogenase	−	49712	50390	678
ndhC	gene	nad-dehydrogenase	−	50443	50806	363
trnV-UAC	gene	translation-rna	−	51792	52445	653
trnM-CAU	gene	translation-rna	+	52633	52706	73
atpE	gene	atp-synthase	−	52899	53301	402
atpB	gene	atp-synthase	−	53297	54794	1497
rbcL	gene	other	+	55544	57008	1464
accD	gene	other	+	57722	59201	1479
psaI	gene	photosystem-i	+	59906	60017	111
ycf4	gene	other	+	60450	61005	555
cemA	gene	other	+	61753	62353	600
petA	gene	cytochrome	+	62559	63522	963
psbJ	gene	photosystem-ii	−	64531	64654	123
psbL	gene	photosystem-ii	−	64787	64904	117
psbF	gene	photosystem-ii	−	64927	65047	120
psbE	gene	photosystem-ii	−	65061	65313	252
petL	gene	cytochrome	+	66190	66286	96
petG	gene	cytochrome	+	66461	66575	114
trnW-CCA	gene	translation-rna	−	66693	66767	74
trnP-UGG	gene	translation-rna	−	66936	67010	74
psaJ	gene	photosystem-i	+	67281	67416	135
rpl33	gene	ribosomal-protein	+	67900	68101	201
rps18	gene	ribosomal-protein	+	68275	68581	306
rpl20	gene	ribosomal-protein	−	68815	69202	387
rps12	gene	ribosomal-protein	−	69984	98038	28054
rps12	gene	ribosomal-protein	+	69984	138566	68582
clpP	gene	other	−	70251	72180	1929
psbB	gene	photosystem-ii	+	72631	74158	1527
psbT	gene	photosystem-ii	+	74339	74447	108
psbN	gene	photosystem-ii	−	74507	74639	132
psbH	gene	photosystem-ii	+	74742	74964	222
petB	gene	cytochrome	+	75088	76458	1370
petD	gene	cytochrome	+	76640	77847	1207
rpoA	gene	rna-polymerase	−	78201	79002	801
rps11	gene	ribosomal-protein	−	79073	79490	417
rpl36	gene	ribosomal-protein	−	79591	79705	114
infA	gene	other	−	79799	80033	234
rps8	gene	ribosomal-protein	−	80156	80567	411
rpl14	gene	ribosomal-protein	−	80719	81088	369
rpl16	gene	ribosomal-protein	−	81214	82448	1234
rps3	gene	ribosomal-protein	−	82603	83266	663
rpl22	gene	ribosomal-protein	−	83267	83723	456
rps19	gene	ribosomal-protein	−	83782	84061	279
rpl2	gene	ribosomal-protein	−	84115	85597	1482
rpl23	gene	ribosomal-protein	−	85615	85897	282
trnI-CAU	gene	translation-rna	−	86056	86130	74
ycf2	gene	other	+	86218	93019	6801
ycf15	gene	other	+	93109	93358	249
trnL-CAA	gene	translation-rna	−	93617	93698	81
ndhB	gene	nad-dehydrogenase	−	94240	96452	2212
rps7	gene	ribosomal-protein	−	96726	97194	468
trnV-GAC	gene	translation-rna	+	99609	99681	72
rrn16	gene	ribosomal-rna	+	99907	101398	1491
trnI-GAU	gene	translation-rna	+	101696	102717	1021
trnA-UGC	gene	translation-rna	+	102781	103672	891
rrn23	gene	ribosomal-rna	+	103834	106646	2812
rrn4.5	gene	ribosomal-rna	+	106744	106847	103
rrn5	gene	ribosomal-rna	+	107094	107215	121
trnR-ACG	gene	translation-rna	+	107449	107523	74
trnN-GUU	gene	translation-rna	−	108071	108143	72
ndhF	gene	nad-dehydrogenase	−	109199	111461	2262
rpl32	gene	ribosomal-protein	+	111788	111965	177
trnL-UAG	gene	translation-rna	+	112411	112491	80
ccsA	gene	other	+	112579	113554	975
ndhD	gene	nad-dehydrogenase	−	113810	115313	1503
psaC	gene	photosystem-i	−	115440	115686	246
ndhE	gene	nad-dehydrogenase	−	115941	116247	306
ndhG	gene	nad-dehydrogenase	−	116463	116994	531
ndhI	gene	nad-dehydrogenase	−	117360	117861	501
ndhA	gene	nad-dehydrogenase	−	117946	120068	2122
ndhH	gene	nad-dehydrogenase	−	120069	121281	1212
rps15	gene	ribosomal-protein	−	121347	121620	273
ycf1	gene	other	−	121815	127452	5637
trnN-GUU	gene	translation-rna	+	127670	127742	72
trnR-ACG	gene	translation-rna	−	128290	128364	74
rrn5	gene	ribosomal-rna	−	128598	128719	121
rrn4.5	gene	ribosomal-rna	−	128966	129069	103
rrn23	gene	ribosomal-rna	−	129167	131979	2812
trnA-UGC	gene	translation-rna	−	132141	133032	891
trnI-GAU	gene	translation-rna	−	133096	134117	1021
ycf68	gene	other	−	133668	133962	294
rrn16	gene	ribosomal-rna	−	134415	135906	1491
trnV-GAC	gene	translation-rna	−	136132	136204	72
rps7	gene	ribosomal-protein	+	138619	139087	468
ndhB	gene	nad-dehydrogenase	+	139361	141573	2212
trnL-CAA	gene	translation-rna	+	142115	142196	81
ycf15	gene	other	−	142455	142704	249
ycf2	gene	other	−	142794	149595	6801
trnI-CAU	gene	translation-rna	+	149683	149757	74
rpl23	gene	ribosomal-protein	+	149916	150198	282
rpl2	gene	ribosomal-protein	+	150216	151698	1482

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomePQ059223.1DNA · accDPQ059223DNA · atpBPQ059223DNA · matKPQ059223DNA · ndhFPQ059223DNA · psbAPQ059223DNA · rbcLPQ059223DNA · rps12PQ059223DNA · ycf1PQ059223