Coordinate-aware organelle record

Scutellaria orientalis subsp. orientalis chloroplast genome

Available PQ059343.1 152,128 bp 133 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

133 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	2	76	74
psbA	gene	photosystem-ii	−	373	1432	1059
trnK-UUU	gene	translation-rna	−	1673	4256	2583
matK	gene	other	−	1963	3490	1527
rps16	gene	ribosomal-protein	−	5155	6313	1158
trnQ-UUG	gene	translation-rna	−	7424	7496	72
psbK	gene	photosystem-ii	+	7820	8006	186
psbI	gene	photosystem-ii	+	8383	8494	111
trnS-GCU	gene	translation-rna	−	8611	8699	88
trnG-UCC	gene	translation-rna	+	9399	10156	757
trnR-UCU	gene	translation-rna	+	10330	10402	72
atpA	gene	atp-synthase	−	10498	12022	1524
atpF	gene	atp-synthase	−	12103	13333	1230
atpH	gene	atp-synthase	−	13693	13939	246
atpI	gene	atp-synthase	−	14926	15670	744
rps2	gene	ribosomal-protein	−	16014	16725	711
rpoC2	gene	rna-polymerase	−	16938	21144	4206
rpoC1	gene	rna-polymerase	−	21298	24133	2835
rpoB	gene	rna-polymerase	−	24159	27372	3213
trnC-GCA	gene	translation-rna	+	28532	28603	71
petN	gene	cytochrome	+	29317	29407	90
psbM	gene	photosystem-ii	−	30407	30512	105
trnD-GUC	gene	translation-rna	−	31029	31103	74
trnY-GUA	gene	translation-rna	−	31216	31300	84
trnE-UUC	gene	translation-rna	−	31359	31432	73
trnT-GGU	gene	translation-rna	+	32007	32079	72
psbD	gene	photosystem-ii	+	33384	34446	1062
psbC	gene	photosystem-ii	+	34393	35815	1422
trnS-UGA	gene	translation-rna	−	36050	36142	92
psbZ	gene	photosystem-ii	+	36457	36646	189
trnG-GCC	gene	translation-rna	+	36921	36992	71
trnfM-CAU	gene	translation-rna	−	37142	37216	74
rps14	gene	ribosomal-protein	−	37370	37673	303
psaB	gene	photosystem-i	−	37801	40006	2205
psaA	gene	photosystem-i	−	40031	42284	2253
ycf3	gene	other	−	42979	44901	1922
trnS-GGA	gene	translation-rna	+	45789	45876	87
rps4	gene	ribosomal-protein	−	46151	46757	606
trnT-UGU	gene	translation-rna	−	47103	47176	73
trnL-UAA	gene	translation-rna	+	47860	48420	560
trnF-GAA	gene	translation-rna	+	48728	48801	73
ndhJ	gene	nad-dehydrogenase	−	49440	49917	477
ndhK	gene	nad-dehydrogenase	−	50025	50703	678
ndhC	gene	nad-dehydrogenase	−	50756	51119	363
trnV-UAC	gene	translation-rna	−	52104	52757	653
trnM-CAU	gene	translation-rna	+	52945	53018	73
atpE	gene	atp-synthase	−	53211	53613	402
atpB	gene	atp-synthase	−	53609	55106	1497
rbcL	gene	other	+	55857	57321	1464
accD	gene	other	+	58034	59513	1479
psaI	gene	photosystem-i	+	60220	60331	111
ycf4	gene	other	+	60764	61319	555
cemA	gene	other	+	62067	62667	600
petA	gene	cytochrome	+	62873	63836	963
psbJ	gene	photosystem-ii	−	64841	64964	123
psbL	gene	photosystem-ii	−	65097	65214	117
psbF	gene	photosystem-ii	−	65237	65357	120
psbE	gene	photosystem-ii	−	65371	65623	252
petL	gene	cytochrome	+	66497	66593	96
petG	gene	cytochrome	+	66767	66881	114
trnW-CCA	gene	translation-rna	−	66999	67073	74
trnP-UGG	gene	translation-rna	−	67242	67316	74
psaJ	gene	photosystem-i	+	67587	67722	135
rpl33	gene	ribosomal-protein	+	68198	68399	201
rps18	gene	ribosomal-protein	+	68573	68879	306
rpl20	gene	ribosomal-protein	−	69116	69503	387
rps12	gene	ribosomal-protein	−	70281	98384	28103
rps12	gene	ribosomal-protein	+	70281	138893	68612
clpP	gene	other	−	70548	72479	1931
psbB	gene	photosystem-ii	+	72937	74464	1527
psbT	gene	photosystem-ii	+	74654	74762	108
psbN	gene	photosystem-ii	−	74822	74954	132
psbH	gene	photosystem-ii	+	75057	75279	222
petB	gene	cytochrome	+	75403	76774	1371
petD	gene	cytochrome	+	76956	78154	1198
rpoA	gene	rna-polymerase	−	78514	79315	801
rps11	gene	ribosomal-protein	−	79386	79803	417
rpl36	gene	ribosomal-protein	−	79904	80018	114
infA	gene	other	−	80112	80346	234
rps8	gene	ribosomal-protein	−	80469	80880	411
rpl14	gene	ribosomal-protein	−	81031	81400	369
rpl16	gene	ribosomal-protein	−	81526	82786	1260
rps3	gene	ribosomal-protein	−	82941	83604	663
rpl22	gene	ribosomal-protein	−	83605	84061	456
rps19	gene	ribosomal-protein	−	84120	84399	279
rpl2	gene	ribosomal-protein	−	84452	85934	1482
rpl23	gene	ribosomal-protein	−	85952	86234	282
trnI-CAU	gene	translation-rna	−	86393	86467	74
ycf2	gene	other	+	86555	93365	6810
ycf15	gene	other	+	93455	93704	249
trnL-CAA	gene	translation-rna	−	93963	94044	81
ndhB	gene	nad-dehydrogenase	−	94586	96744	2158
rps7	gene	ribosomal-protein	−	97072	97540	468
trnV-GAC	gene	translation-rna	+	99955	100027	72
rrn16	gene	ribosomal-rna	+	100253	101744	1491
trnI-GAU	gene	translation-rna	+	102042	103063	1021
trnA-UGC	gene	translation-rna	+	103127	104014	887
rrn23	gene	ribosomal-rna	+	104176	106988	2812
rrn4.5	gene	ribosomal-rna	+	107086	107189	103
rrn5	gene	ribosomal-rna	+	107436	107557	121
trnR-ACG	gene	translation-rna	+	107791	107865	74
trnN-GUU	gene	translation-rna	−	108413	108485	72
ndhF	gene	nad-dehydrogenase	−	109541	111803	2262
rpl32	gene	ribosomal-protein	+	112130	112307	177
trnL-UAG	gene	translation-rna	+	112754	112834	80
ccsA	gene	other	+	112923	113898	975
ndhD	gene	nad-dehydrogenase	−	114170	115700	1530
psaC	gene	photosystem-i	−	115800	116046	246
ndhE	gene	nad-dehydrogenase	−	116294	116600	306
ndhG	gene	nad-dehydrogenase	−	116816	117347	531
ndhI	gene	nad-dehydrogenase	−	117708	118209	501
ndhA	gene	nad-dehydrogenase	−	118289	120411	2122
ndhH	gene	nad-dehydrogenase	−	120412	121594	1182
rps15	gene	ribosomal-protein	−	121690	121963	273
ycf1	gene	other	−	122158	127783	5625
trnN-GUU	gene	translation-rna	+	128001	128073	72
trnR-ACG	gene	translation-rna	−	128621	128695	74
rrn5	gene	ribosomal-rna	−	128929	129050	121
rrn4.5	gene	ribosomal-rna	−	129297	129400	103
rrn23	gene	ribosomal-rna	−	129498	132310	2812
trnA-UGC	gene	translation-rna	−	132472	133359	887
trnI-GAU	gene	translation-rna	−	133423	134444	1021
ycf68	gene	other	−	133995	134289	294
rrn16	gene	ribosomal-rna	−	134742	136233	1491
trnV-GAC	gene	translation-rna	−	136459	136531	72
rps7	gene	ribosomal-protein	+	138946	139414	468
ndhB	gene	nad-dehydrogenase	+	139742	141900	2158
trnL-CAA	gene	translation-rna	+	142442	142523	81
ycf15	gene	other	−	142782	143031	249
ycf2	gene	other	−	143121	149931	6810
trnI-CAU	gene	translation-rna	+	150019	150093	74
rpl23	gene	ribosomal-protein	+	150252	150534	282
rpl2	gene	ribosomal-protein	+	150552	152034	1482

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomePQ059343.1DNA · accDPQ059343DNA · atpBPQ059343DNA · matKPQ059343DNA · ndhFPQ059343DNA · psbAPQ059343DNA · rbcLPQ059343DNA · rps12PQ059343DNA · ycf1PQ059343