Coordinate-aware organelle record

Scutellaria orientalis chloroplast genome

Available MW420933.1 152,176 bp 132 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

132 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	3	77	74
psbA	gene	photosystem-ii	−	374	1433	1059
trnK-UUU	gene	translation-rna	−	1674	4253	2579
matK	gene	other	−	1964	3512	1548
rps16	gene	ribosomal-protein	−	5156	6314	1158
trnQ-UUC	gene	translation-rna	−	7443	7515	72
psbK	gene	photosystem-ii	+	7839	8025	186
psbI	gene	photosystem-ii	+	8412	8523	111
trnS-GCU	gene	translation-rna	−	8641	8729	88
trnG-CGA	gene	translation-rna	+	9426	10174	748
trnR-UCU	gene	translation-rna	+	10348	10420	72
atpA	gene	atp-synthase	−	10516	12040	1524
atpF	gene	atp-synthase	−	12121	13350	1229
atpH	gene	atp-synthase	−	13712	13958	246
atpI	gene	atp-synthase	−	14944	15688	744
rps2	gene	ribosomal-protein	−	16028	16739	711
rpoC2	gene	rna-polymerase	−	16953	21159	4206
rpoC1	gene	rna-polymerase	−	21313	24148	2835
rpoB	gene	rna-polymerase	−	24174	27387	3213
trnC-GCA	gene	translation-rna	+	28547	28618	71
petN	gene	cytochrome	+	29333	29423	90
psbM	gene	photosystem-ii	−	30473	30578	105
trnD-GUC	gene	translation-rna	−	31103	31177	74
trnY-GUA	gene	translation-rna	−	31286	31370	84
trnE-UUC	gene	translation-rna	−	31429	31502	73
trnT-GGU	gene	translation-rna	+	32078	32150	72
psbD	gene	photosystem-ii	+	33454	34516	1062
psbC	gene	photosystem-ii	+	34463	35885	1422
trnS-UCA	gene	translation-rna	−	36119	36212	93
psbZ	gene	photosystem-ii	+	36528	36717	189
trnG-GCC	gene	translation-rna	+	36993	37064	71
trnfM-CAU	gene	translation-rna	−	37208	37282	74
rps14	gene	ribosomal-protein	−	37436	37739	303
psaB	gene	photosystem-i	−	37867	40072	2205
psaA	gene	photosystem-i	−	40097	42350	2253
ycf3	gene	other	−	43045	44965	1920
trnS-GGA	gene	translation-rna	+	45855	45942	87
rps4	gene	ribosomal-protein	−	46217	46823	606
trnT-UGU	gene	translation-rna	−	47165	47238	73
trnL-UAA	gene	translation-rna	+	47922	48484	562
trnF-GAA	gene	translation-rna	+	48792	48865	73
ndhJ	gene	nad-dehydrogenase	−	49510	49987	477
ndhK	gene	nad-dehydrogenase	−	50095	50773	678
ndhC	gene	nad-dehydrogenase	−	50826	51189	363
trnV-UAC	gene	translation-rna	−	52179	52832	653
trnM-CAU	gene	translation-rna	+	53020	53093	73
atpE	gene	atp-synthase	−	53286	53688	402
atpB	gene	atp-synthase	−	53684	55181	1497
rbcL	gene	other	+	55953	57396	1443
accD	gene	other	+	58109	59588	1479
psaI	gene	photosystem-i	+	60294	60405	111
ycf4	gene	other	+	60838	61393	555
cemA	gene	other	+	62081	62741	660
petA	gene	cytochrome	+	62947	63910	963
pabJ	gene	other	−	64916	65039	123
psbL	gene	photosystem-ii	−	65172	65289	117
psbF	gene	photosystem-ii	−	65312	65432	120
psbE	gene	photosystem-ii	−	65446	65698	252
petL	gene	cytochrome	+	66571	66667	96
petG	gene	cytochrome	+	66841	66955	114
trnW-CCA	gene	translation-rna	−	67073	67147	74
trnP-UGG	gene	translation-rna	−	67316	67390	74
psbJ	gene	photosystem-ii	+	67657	67792	135
rpl33	gene	ribosomal-protein	+	68268	68469	201
rps18	gene	ribosomal-protein	+	68643	68949	306
rpl20	gene	ribosomal-protein	−	69183	69570	387
rps12	gene	ribosomal-protein	−	70354	98414	28060
rps12	gene	ribosomal-protein	+	70354	138935	68581
clpP	gene	other	−	70621	72550	1929
psbB	gene	photosystem-ii	+	73001	74528	1527
psbT	gene	photosystem-ii	+	74718	74826	108
psbN	gene	photosystem-ii	−	74886	75018	132
psbH	gene	photosystem-ii	+	75121	75343	222
petB	gene	cytochrome	+	75467	76831	1364
petD	gene	cytochrome	+	77013	78215	1202
rpoA	gene	rna-polymerase	−	78569	79370	801
rps11	gene	ribosomal-protein	−	79441	79858	417
rpl36	gene	ribosomal-protein	−	79959	80073	114
infA	gene	other	−	80167	80401	234
rps8	gene	ribosomal-protein	−	80523	80934	411
rpl14	gene	ribosomal-protein	−	81086	81455	369
rpl16	gene	ribosomal-protein	−	81581	82815	1234
rps3	gene	ribosomal-protein	−	82970	83633	663
rpl22	gene	ribosomal-protein	−	83634	84090	456
rps19	gene	ribosomal-protein	−	84149	84428	279
rpl2	gene	ribosomal-protein	−	84482	85964	1482
rpl23	gene	ribosomal-protein	−	85982	86264	282
trnI-CAU	gene	translation-rna	−	86423	86497	74
ycf2	gene	other	+	86585	93395	6810
ycf15	gene	other	+	93470	93734	264
trnL-CAA	gene	translation-rna	−	93993	94074	81
ndhB	gene	nad-dehydrogenase	−	94616	96828	2212
rps7	gene	ribosomal-protein	−	97102	97570	468
trnV-GAC	gene	translation-rna	+	99985	100057	72
rrn16	gene	ribosomal-rna	+	100283	101774	1491
trnI-GAU	gene	translation-rna	+	102072	103092	1020
trnA-UGC	gene	translation-rna	+	103157	104043	886
rrn23	gene	ribosomal-rna	+	104212	107024	2812
rrn4.5	gene	ribosomal-rna	+	107122	107225	103
rrn5	gene	ribosomal-rna	+	107472	107593	121
trnR-ACG	gene	translation-rna	+	107827	107901	74
trnN-GUU	gene	translation-rna	+	108449	108521	72
ndhF	gene	nad-dehydrogenase	−	109577	111839	2262
rpl32	gene	ribosomal-protein	+	112166	112343	177
trnL-UAG	gene	translation-rna	+	112790	112870	80
ccsA	gene	other	+	112971	113946	975
ndhD	gene	nad-dehydrogenase	−	114184	115714	1530
psaC	gene	photosystem-i	−	115814	116060	246
ndhE	gene	nad-dehydrogenase	−	116315	116621	306
ndhG	gene	nad-dehydrogenase	−	116837	117368	531
ndhI	gene	nad-dehydrogenase	−	117734	118235	501
ndhA	gene	nad-dehydrogenase	−	118315	120437	2122
ndhH	gene	nad-dehydrogenase	−	120438	121620	1182
rps15	gene	ribosomal-protein	−	121716	121989	273
ycf1	gene	other	−	122182	127708	5526
trnN-GUU	gene	translation-rna	+	128037	128109	72
trnR-ACG	gene	translation-rna	−	128657	128731	74
rrn5	gene	ribosomal-rna	−	128965	129086	121
rrn4.5	gene	ribosomal-rna	−	129333	129436	103
rrn23	gene	ribosomal-rna	−	129534	132346	2812
trnA-UGC	gene	translation-rna	−	132515	133401	886
trnI-GAU	gene	translation-rna	−	133466	134486	1020
rrn16	gene	ribosomal-rna	−	134784	136275	1491
trnV-GAC	gene	translation-rna	−	136501	136573	72
rps7	gene	ribosomal-protein	+	138988	139456	468
ndhB	gene	nad-dehydrogenase	+	139730	141942	2212
trnL-CAA	gene	translation-rna	+	142484	142565	81
ycf15	gene	other	−	142824	143088	264
ycf2	gene	other	−	143163	149973	6810
trnI-CAU	gene	translation-rna	+	150061	150135	74
rpl23	gene	ribosomal-protein	+	150294	150576	282
rpl2	gene	ribosomal-protein	+	150594	152076	1482

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomeMW420933.1DNA · accDMW420933DNA · atpBMW420933DNA · matKMW420933DNA · ndhFMW420933DNA · psbAMW420933DNA · rbcLMW420933DNA · rps12MW420933DNA · ycf1MW420933