Coordinate-aware organelle record

Scutellaria ovata subsp. ovata chloroplast genome

Available PQ059328.1 152,527 bp 133 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

133 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	2	76	74
psbA	gene	photosystem-ii	−	369	1428	1059
trnK-UUU	gene	translation-rna	−	1660	4248	2588
matK	gene	other	−	1955	3491	1536
rps16	gene	ribosomal-protein	−	5152	6320	1168
trnQ-UUG	gene	translation-rna	−	7450	7522	72
psbK	gene	photosystem-ii	+	7846	8032	186
psbI	gene	photosystem-ii	+	8422	8533	111
trnS-GCU	gene	translation-rna	−	8649	8737	88
trnG-UCC	gene	translation-rna	+	9422	10183	761
trnR-UCU	gene	translation-rna	+	10357	10429	72
atpA	gene	atp-synthase	−	10525	12040	1515
atpF	gene	atp-synthase	−	12133	13360	1227
atpH	gene	atp-synthase	−	13718	13964	246
atpI	gene	atp-synthase	−	14966	15710	744
rps2	gene	ribosomal-protein	−	16051	16888	837
rpoC2	gene	rna-polymerase	−	16978	21184	4206
rpoC1	gene	rna-polymerase	−	21338	24199	2861
rpoB	gene	rna-polymerase	−	24225	27438	3213
trnC-GCA	gene	translation-rna	+	28612	28683	71
petN	gene	cytochrome	+	29396	29486	90
psbM	gene	photosystem-ii	−	30488	30593	105
trnD-GUC	gene	translation-rna	−	31118	31192	74
trnY-GUA	gene	translation-rna	−	31305	31389	84
trnE-UUC	gene	translation-rna	−	31448	31521	73
trnT-GGU	gene	translation-rna	+	32103	32175	72
psbD	gene	photosystem-ii	+	33484	34546	1062
psbC	gene	photosystem-ii	+	34493	35915	1422
trnS-UGA	gene	translation-rna	−	36170	36262	92
psbZ	gene	photosystem-ii	+	36582	36771	189
trnG-GCC	gene	translation-rna	+	37042	37113	71
trnfM-CAU	gene	translation-rna	−	37265	37339	74
rps14	gene	ribosomal-protein	−	37495	37798	303
psaB	gene	photosystem-i	−	37925	40130	2205
psaA	gene	photosystem-i	−	40155	42408	2253
ycf3	gene	other	−	43081	45006	1925
trnS-GGA	gene	translation-rna	+	45891	45978	87
rps4	gene	ribosomal-protein	−	46263	46869	606
trnT-UGU	gene	translation-rna	−	47212	47285	73
trnL-UAA	gene	translation-rna	+	47973	48543	570
trnF-GAA	gene	translation-rna	+	48848	48921	73
ndhJ	gene	nad-dehydrogenase	−	49569	50046	477
ndhK	gene	nad-dehydrogenase	−	50153	50831	678
ndhC	gene	nad-dehydrogenase	−	50883	51246	363
trnV-UAC	gene	translation-rna	−	52238	52891	653
trnM-CAU	gene	translation-rna	+	53071	53144	73
atpE	gene	atp-synthase	−	53353	53755	402
atpB	gene	atp-synthase	−	53751	55239	1488
rbcL	gene	other	+	55990	57454	1464
accD	gene	other	+	58175	59642	1467
psaI	gene	photosystem-i	+	60358	60469	111
ycf4	gene	other	+	60902	61457	555
cemA	gene	other	+	62198	62798	600
petA	gene	cytochrome	+	63004	63967	963
psbJ	gene	photosystem-ii	−	64966	65089	123
psbL	gene	photosystem-ii	−	65222	65339	117
psbF	gene	photosystem-ii	−	65362	65482	120
psbE	gene	photosystem-ii	−	65496	65748	252
petL	gene	cytochrome	+	66656	66752	96
petG	gene	cytochrome	+	66927	67041	114
trnW-CCA	gene	translation-rna	−	67159	67233	74
trnP-UGG	gene	translation-rna	−	67403	67477	74
psaJ	gene	photosystem-i	+	67749	67884	135
rpl33	gene	ribosomal-protein	+	68356	68557	201
rps18	gene	ribosomal-protein	+	68731	69037	306
rpl20	gene	ribosomal-protein	−	69272	69659	387
rps12	gene	ribosomal-protein	−	70441	98561	28120
rps12	gene	ribosomal-protein	+	70441	139294	68853
clpP	gene	other	−	70709	72644	1935
psbB	gene	photosystem-ii	+	73105	74632	1527
psbT	gene	photosystem-ii	+	74823	74925	102
psbN	gene	photosystem-ii	−	74998	75130	132
psbH	gene	photosystem-ii	+	75233	75455	222
petB	gene	cytochrome	+	75579	76948	1369
petD	gene	cytochrome	+	77136	78328	1192
rpoA	gene	rna-polymerase	−	78490	79498	1008
rps11	gene	ribosomal-protein	−	79569	79986	417
rpl36	gene	ribosomal-protein	−	80087	80201	114
infA	gene	other	−	80296	80530	234
rps8	gene	ribosomal-protein	−	80649	81060	411
rpl14	gene	ribosomal-protein	−	81228	81597	369
rpl16	gene	ribosomal-protein	−	81722	82966	1244
rps3	gene	ribosomal-protein	−	83120	83783	663
rpl22	gene	ribosomal-protein	−	83784	84240	456
rps19	gene	ribosomal-protein	−	84299	84578	279
rpl2	gene	ribosomal-protein	−	84632	86115	1483
rpl23	gene	ribosomal-protein	−	86133	86415	282
trnI-CAU	gene	translation-rna	−	86574	86648	74
ycf2	gene	other	+	86736	93546	6810
ycf15	gene	other	+	93636	93885	249
trnL-CAA	gene	translation-rna	−	94140	94221	81
ndhB	gene	nad-dehydrogenase	−	94763	96921	2158
rps7	gene	ribosomal-protein	−	97249	97717	468
trnV-GAC	gene	translation-rna	+	100138	100210	72
rrn16	gene	ribosomal-rna	+	100437	101928	1491
trnI-GAU	gene	translation-rna	+	102226	103247	1021
trnA-UGC	gene	translation-rna	+	103311	104192	881
rrn23	gene	ribosomal-rna	+	104354	107167	2813
rrn4.5	gene	ribosomal-rna	+	107265	107368	103
rrn5	gene	ribosomal-rna	+	107615	107736	121
trnR-ACG	gene	translation-rna	+	107970	108044	74
trnN-GUU	gene	translation-rna	−	108590	108662	72
ndhF	gene	nad-dehydrogenase	−	109738	111979	2241
rpl32	gene	ribosomal-protein	+	112500	112677	177
trnL-UAG	gene	translation-rna	+	113106	113186	80
ccsA	gene	other	+	113283	114258	975
ndhD	gene	nad-dehydrogenase	−	114490	116014	1524
psaC	gene	photosystem-i	−	116112	116358	246
ndhE	gene	nad-dehydrogenase	−	116614	116920	306
ndhG	gene	nad-dehydrogenase	−	117140	117671	531
ndhI	gene	nad-dehydrogenase	−	118035	118536	501
ndhA	gene	nad-dehydrogenase	−	118616	120703	2087
ndhH	gene	nad-dehydrogenase	−	120704	121886	1182
rps15	gene	ribosomal-protein	−	121988	122261	273
ycf1	gene	other	−	122529	128184	5655
trnN-GUU	gene	translation-rna	+	128402	128474	72
trnR-ACG	gene	translation-rna	−	129020	129094	74
rrn5	gene	ribosomal-rna	−	129328	129449	121
rrn4.5	gene	ribosomal-rna	−	129696	129799	103
rrn23	gene	ribosomal-rna	−	129897	132710	2813
trnA-UGC	gene	translation-rna	−	132872	133753	881
trnI-GAU	gene	translation-rna	−	133817	134838	1021
ycf68	gene	other	−	134443	134683	240
rrn16	gene	ribosomal-rna	−	135136	136627	1491
trnV-GAC	gene	translation-rna	−	136854	136926	72
rps7	gene	ribosomal-protein	+	139347	139815	468
ndhB	gene	nad-dehydrogenase	+	140143	142301	2158
trnL-CAA	gene	translation-rna	+	142843	142924	81
ycf15	gene	other	−	143179	143428	249
ycf2	gene	other	−	143518	150328	6810
trnI-CAU	gene	translation-rna	+	150416	150490	74
rpl23	gene	ribosomal-protein	+	150649	150931	282
rpl2	gene	ribosomal-protein	+	150949	152432	1483

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomePQ059328.1DNA · accDPQ059328DNA · atpBPQ059328DNA · matKPQ059328DNA · ndhFPQ059328DNA · psbAPQ059328DNA · rbcLPQ059328DNA · rps12PQ059328DNA · ycf1PQ059328