Coordinate-aware organelle record

Scutellaria ovata chloroplast genome

Available MW420970.1 151,637 bp 132 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

132 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	1	75	74
psbA	gene	photosystem-ii	−	378	1437	1059
trnK-UUU	gene	translation-rna	−	1673	4260	2587
matK	gene	other	−	1970	3506	1536
rps16	gene	ribosomal-protein	−	5165	6331	1166
trnQ-UUC	gene	translation-rna	−	7423	7495	72
psbK	gene	photosystem-ii	+	7827	8013	186
psbI	gene	photosystem-ii	+	8395	8506	111
trnS-GCU	gene	translation-rna	−	8615	8703	88
trnG-CGA	gene	translation-rna	+	9376	10138	762
trnR-UCU	gene	translation-rna	+	10312	10384	72
atpA	gene	atp-synthase	−	10486	12010	1524
atpF	gene	atp-synthase	−	12082	13316	1234
atpH	gene	atp-synthase	−	13685	13931	246
atpI	gene	atp-synthase	−	14920	15664	744
rps2	gene	ribosomal-protein	−	16003	16714	711
rpoC2	gene	rna-polymerase	−	16936	21130	4194
rpoC1	gene	rna-polymerase	−	21284	24093	2809
rpoB	gene	rna-polymerase	−	24119	27332	3213
trnC-GCA	gene	translation-rna	+	28488	28559	71
petN	gene	cytochrome	+	29270	29360	90
psbM	gene	photosystem-ii	−	30351	30465	114
trnD-GUC	gene	translation-rna	−	30994	31068	74
trnY-GUA	gene	translation-rna	−	31186	31270	84
trnE-UUC	gene	translation-rna	−	31329	31402	73
trnT-GGU	gene	translation-rna	+	31985	32057	72
psbD	gene	photosystem-ii	+	33349	34411	1062
psbC	gene	photosystem-ii	+	34358	35780	1422
trnS-UCA	gene	translation-rna	−	36019	36112	93
psbZ	gene	photosystem-ii	+	36431	36620	189
trnG-GCC	gene	translation-rna	+	36895	36966	71
trnfM-CAU	gene	translation-rna	−	37119	37193	74
rps14	gene	ribosomal-protein	−	37342	37645	303
psaB	gene	photosystem-i	−	37772	39977	2205
psaA	gene	photosystem-i	−	40001	42254	2253
ycf3	gene	other	−	42949	44861	1912
trnS-GGA	gene	translation-rna	+	45201	45288	87
rps4	gene	ribosomal-protein	−	45571	46177	606
trnT-UGU	gene	translation-rna	−	46515	46588	73
trnL-UAA	gene	translation-rna	+	47220	47785	565
trnF-GAA	gene	translation-rna	+	48089	48162	73
ndhJ	gene	nad-dehydrogenase	−	48813	49290	477
ndhK	gene	nad-dehydrogenase	−	49397	50075	678
ndhC	gene	nad-dehydrogenase	−	50127	50490	363
trnV-UAC	gene	translation-rna	−	51477	52130	653
trnM-CAU	gene	translation-rna	+	52310	52383	73
atpE	gene	atp-synthase	−	52593	52995	402
atpB	gene	atp-synthase	−	52991	54488	1497
rbcL	gene	other	+	55254	56697	1443
accD	gene	other	+	57408	58887	1479
psaI	gene	photosystem-i	+	59581	59692	111
ycf4	gene	other	+	60118	60673	555
cemA	gene	other	+	61353	62013	660
petA	gene	cytochrome	+	62219	63182	963
pabJ	gene	other	−	64224	64347	123
psbL	gene	photosystem-ii	−	64481	64598	117
psbF	gene	photosystem-ii	−	64621	64741	120
psbE	gene	photosystem-ii	−	64755	65007	252
petL	gene	cytochrome	+	65914	66010	96
petG	gene	cytochrome	+	66185	66299	114
trnW-CCA	gene	translation-rna	−	66417	66491	74
trnP-UGG	gene	translation-rna	−	66654	66728	74
psbJ	gene	photosystem-ii	+	66996	67131	135
rpl33	gene	ribosomal-protein	+	67602	67803	201
rps18	gene	ribosomal-protein	+	67976	68282	306
rpl20	gene	ribosomal-protein	−	68517	68904	387
rps12	gene	ribosomal-protein	−	69688	97788	28100
rps12	gene	ribosomal-protein	+	69688	138417	68729
clpP	gene	other	−	69955	71885	1930
psbB	gene	photosystem-ii	+	72336	73863	1527
psbT	gene	photosystem-ii	+	74054	74156	102
psbN	gene	photosystem-ii	−	74229	74361	132
psbH	gene	photosystem-ii	+	74464	74686	222
petB	gene	cytochrome	+	74810	76181	1371
petD	gene	cytochrome	+	76369	77575	1206
rpoA	gene	rna-polymerase	−	77737	78751	1014
rps11	gene	ribosomal-protein	−	78822	79239	417
rpl36	gene	ribosomal-protein	−	79340	79454	114
infA	gene	other	−	79549	79783	234
rps8	gene	ribosomal-protein	−	79903	80314	411
rpl14	gene	ribosomal-protein	−	80472	80841	369
rpl16	gene	ribosomal-protein	−	80958	82202	1244
rps3	gene	ribosomal-protein	−	82356	83019	663
rpl22	gene	ribosomal-protein	−	83020	83476	456
rps19	gene	ribosomal-protein	−	83540	83819	279
rpl2	gene	ribosomal-protein	−	83875	85358	1483
rpl23	gene	ribosomal-protein	−	85376	85658	282
trnI-CAU	gene	translation-rna	−	85817	85891	74
ycf2	gene	other	+	85979	92777	6798
ycf15	gene	other	+	92918	93116	198
trnL-CAA	gene	translation-rna	−	93376	93457	81
ndhB	gene	nad-dehydrogenase	−	93999	96202	2203
rps7	gene	ribosomal-protein	−	96476	96944	468
trnV-GAC	gene	translation-rna	+	99357	99429	72
rrn16	gene	ribosomal-rna	+	99656	101147	1491
trnI-GAU	gene	translation-rna	+	101445	102465	1020
trnA-UGC	gene	translation-rna	+	102530	103417	887
rrn23	gene	ribosomal-rna	+	103579	106392	2813
rrn4.5	gene	ribosomal-rna	+	106490	106593	103
rrn5	gene	ribosomal-rna	+	106840	106961	121
trnR-ACG	gene	translation-rna	+	107185	107259	74
trnN-GUU	gene	translation-rna	+	107806	107878	72
ndhF	gene	nad-dehydrogenase	−	108954	111195	2241
rpl32	gene	ribosomal-protein	+	111716	111893	177
trnL-UAG	gene	translation-rna	+	112328	112408	80
ccsA	gene	other	+	112501	113476	975
ndhD	gene	nad-dehydrogenase	−	113710	115231	1521
psaC	gene	photosystem-i	−	115339	115585	246
ndhE	gene	nad-dehydrogenase	−	115836	116142	306
ndhG	gene	nad-dehydrogenase	−	116372	116903	531
ndhI	gene	nad-dehydrogenase	−	117267	117768	501
ndhA	gene	nad-dehydrogenase	−	117848	119946	2098
ndhH	gene	nad-dehydrogenase	−	119947	121129	1182
rps15	gene	ribosomal-protein	−	121225	121498	273
ycf1	gene	other	−	121771	127207	5436
trnN-GUU	gene	translation-rna	+	127536	127608	72
trnR-ACG	gene	translation-rna	−	128155	128229	74
rrn5	gene	ribosomal-rna	−	128453	128574	121
rrn4.5	gene	ribosomal-rna	−	128821	128924	103
rrn23	gene	ribosomal-rna	−	129022	131835	2813
trnA-UGC	gene	translation-rna	−	131997	132884	887
trnI-GAU	gene	translation-rna	−	132949	133969	1020
rrn16	gene	ribosomal-rna	−	134267	135758	1491
trnV-GAC	gene	translation-rna	−	135985	136057	72
rps7	gene	ribosomal-protein	+	138470	138938	468
ndhB	gene	nad-dehydrogenase	+	139212	141415	2203
trnL-CAA	gene	translation-rna	+	141957	142038	81
ycf15	gene	other	−	142298	142496	198
ycf2	gene	other	−	142637	149435	6798
trnI-CAU	gene	translation-rna	+	149523	149597	74
rpl23	gene	ribosomal-protein	+	149756	150038	282
rpl2	gene	ribosomal-protein	+	150056	151539	1483

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomeMW420970.1DNA · accDMW420970DNA · atpBMW420970DNA · matKMW420970DNA · ndhFMW420970DNA · psbAMW420970DNA · rbcLMW420970DNA · rps12MW420970DNA · ycf1MW420970