Coordinate-aware organelle record

Scutellaria pacifica chloroplast genome

Available PQ059298.1 152,521 bp 133 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

133 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	2	76	74
psbA	gene	photosystem-ii	−	368	1427	1059
trnK-UUU	gene	translation-rna	−	1660	4248	2588
matK	gene	other	−	1955	3491	1536
rps16	gene	ribosomal-protein	−	5146	6307	1161
trnQ-UUG	gene	translation-rna	−	7426	7498	72
psbK	gene	photosystem-ii	+	7822	8008	186
psbI	gene	photosystem-ii	+	8398	8509	111
trnS-GCU	gene	translation-rna	−	8626	8714	88
trnG-UCC	gene	translation-rna	+	9392	10154	762
trnR-UCU	gene	translation-rna	+	10328	10400	72
atpA	gene	atp-synthase	−	10496	12020	1524
atpF	gene	atp-synthase	−	12093	13321	1228
atpH	gene	atp-synthase	−	13676	13922	246
atpI	gene	atp-synthase	−	14929	15673	744
rps2	gene	ribosomal-protein	−	16020	16857	837
rpoC2	gene	rna-polymerase	−	16942	21148	4206
rpoC1	gene	rna-polymerase	−	21298	24139	2841
rpoB	gene	rna-polymerase	−	24165	27378	3213
trnC-GCA	gene	translation-rna	+	28543	28614	71
petN	gene	cytochrome	+	29316	29406	90
psbM	gene	photosystem-ii	−	30422	30527	105
trnD-GUC	gene	translation-rna	−	31060	31134	74
trnY-GUA	gene	translation-rna	−	31247	31331	84
trnE-UUC	gene	translation-rna	−	31390	31463	73
trnT-GGU	gene	translation-rna	+	32045	32117	72
psbD	gene	photosystem-ii	+	33426	34488	1062
psbC	gene	photosystem-ii	+	34435	35857	1422
trnS-UGA	gene	translation-rna	−	36099	36191	92
psbZ	gene	photosystem-ii	+	36510	36699	189
trnG-GCC	gene	translation-rna	+	36970	37041	71
trnfM-CAU	gene	translation-rna	−	37193	37267	74
rps14	gene	ribosomal-protein	−	37416	37719	303
psaB	gene	photosystem-i	−	37846	40051	2205
psaA	gene	photosystem-i	−	40076	42329	2253
ycf3	gene	other	−	42997	44921	1924
trnS-GGA	gene	translation-rna	+	45807	45894	87
rps4	gene	ribosomal-protein	−	46179	46785	606
trnT-UGU	gene	translation-rna	−	47129	47202	73
trnL-UAA	gene	translation-rna	+	47879	48448	569
trnF-GAA	gene	translation-rna	+	48752	48825	73
ndhJ	gene	nad-dehydrogenase	−	49473	49950	477
ndhK	gene	nad-dehydrogenase	−	50057	50735	678
ndhC	gene	nad-dehydrogenase	−	50787	51150	363
trnV-UAC	gene	translation-rna	−	52118	52771	653
trnM-CAU	gene	translation-rna	+	52952	53025	73
atpE	gene	atp-synthase	−	53234	53636	402
atpB	gene	atp-synthase	−	53632	55120	1488
rbcL	gene	other	+	55880	57344	1464
accD	gene	other	+	58065	59532	1467
psaI	gene	photosystem-i	+	60248	60359	111
ycf4	gene	other	+	60792	61347	555
cemA	gene	other	+	62088	62688	600
petA	gene	cytochrome	+	62894	63857	963
psbJ	gene	photosystem-ii	−	64887	65010	123
psbL	gene	photosystem-ii	−	65143	65365	222
psbF	gene	photosystem-ii	−	65283	65403	120
psbE	gene	photosystem-ii	−	65417	65669	252
petL	gene	cytochrome	+	66577	66673	96
petG	gene	cytochrome	+	66848	66962	114
trnW-CCA	gene	translation-rna	−	67080	67154	74
trnP-UGG	gene	translation-rna	−	67323	67397	74
psaJ	gene	photosystem-i	+	67669	67804	135
rpl33	gene	ribosomal-protein	+	68280	68481	201
rps18	gene	ribosomal-protein	+	68655	68961	306
rpl20	gene	ribosomal-protein	−	69198	69585	387
rps12	gene	ribosomal-protein	−	70375	98515	28140
rps12	gene	ribosomal-protein	+	70375	139298	68923
clpP	gene	other	−	70643	72576	1933
psbB	gene	photosystem-ii	+	73049	74576	1527
psbT	gene	photosystem-ii	+	74768	74870	102
psbN	gene	photosystem-ii	−	74943	75075	132
psbH	gene	photosystem-ii	+	75178	75400	222
petB	gene	cytochrome	+	75524	76891	1367
petD	gene	cytochrome	+	77079	78282	1203
rpoA	gene	rna-polymerase	−	78444	79458	1014
rps11	gene	ribosomal-protein	−	79529	79946	417
rpl36	gene	ribosomal-protein	−	80047	80161	114
infA	gene	other	−	80256	80490	234
rps8	gene	ribosomal-protein	−	80609	81020	411
rpl14	gene	ribosomal-protein	−	81191	81560	369
rpl16	gene	ribosomal-protein	−	81686	82930	1244
rps3	gene	ribosomal-protein	−	83084	83747	663
rpl22	gene	ribosomal-protein	−	83748	84204	456
rps19	gene	ribosomal-protein	−	84263	84542	279
rpl2	gene	ribosomal-protein	−	84597	86080	1483
rpl23	gene	ribosomal-protein	−	86098	86380	282
trnI-CAU	gene	translation-rna	−	86528	86602	74
ycf2	gene	other	+	86690	93500	6810
ycf15	gene	other	+	93590	93839	249
trnL-CAA	gene	translation-rna	−	94094	94175	81
ndhB	gene	nad-dehydrogenase	−	94717	96929	2212
rps7	gene	ribosomal-protein	−	97203	97671	468
trnV-GAC	gene	translation-rna	+	100092	100164	72
rrn16	gene	ribosomal-rna	+	100391	101882	1491
trnI-GAU	gene	translation-rna	+	102180	103201	1021
trnA-UGC	gene	translation-rna	+	103265	104146	881
rrn23	gene	ribosomal-rna	+	104315	107128	2813
rrn4.5	gene	ribosomal-rna	+	107226	107329	103
rrn5	gene	ribosomal-rna	+	107576	107697	121
trnR-ACG	gene	translation-rna	+	107931	108005	74
trnN-GUU	gene	translation-rna	−	108551	108623	72
ndhF	gene	nad-dehydrogenase	−	109699	111940	2241
rpl32	gene	ribosomal-protein	+	112461	112638	177
trnL-UAG	gene	translation-rna	+	113077	113157	80
ccsA	gene	other	+	113254	114229	975
ndhD	gene	nad-dehydrogenase	−	114461	115964	1503
psaC	gene	photosystem-i	−	116083	116329	246
ndhE	gene	nad-dehydrogenase	−	116585	116891	306
ndhG	gene	nad-dehydrogenase	−	117121	117652	531
ndhI	gene	nad-dehydrogenase	−	118017	118518	501
ndhA	gene	nad-dehydrogenase	−	118598	120698	2100
ndhH	gene	nad-dehydrogenase	−	120699	121881	1182
rps15	gene	ribosomal-protein	−	121984	122257	273
ycf1	gene	other	−	122523	128181	5658
trnN-GUU	gene	translation-rna	+	128399	128471	72
trnR-ACG	gene	translation-rna	−	129017	129091	74
rrn5	gene	ribosomal-rna	−	129325	129446	121
rrn4.5	gene	ribosomal-rna	−	129693	129796	103
rrn23	gene	ribosomal-rna	−	129894	132707	2813
trnA-UGC	gene	translation-rna	−	132876	133757	881
trnI-GAU	gene	translation-rna	−	133821	134842	1021
ycf68	gene	other	−	134447	134687	240
rrn16	gene	ribosomal-rna	−	135140	136631	1491
trnV-GAC	gene	translation-rna	−	136858	136930	72
rps7	gene	ribosomal-protein	+	139351	139819	468
ndhB	gene	nad-dehydrogenase	+	140093	142305	2212
trnL-CAA	gene	translation-rna	+	142847	142928	81
ycf15	gene	other	−	143183	143432	249
ycf2	gene	other	−	143522	150332	6810
trnI-CAU	gene	translation-rna	+	150420	150494	74
rpl23	gene	ribosomal-protein	+	150642	150924	282
rpl2	gene	ribosomal-protein	+	150942	152425	1483

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomePQ059298.1DNA · accDPQ059298DNA · atpBPQ059298DNA · matKPQ059298DNA · ndhFPQ059298DNA · psbAPQ059298DNA · rbcLPQ059298DNA · rps12PQ059298DNA · ycf1PQ059298