Coordinate-aware organelle record

Scutellaria paulsenii chloroplast genome

Available PQ058238.1 151,751 bp 133 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

133 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	3	77	74
psbA	gene	photosystem-ii	−	372	1431	1059
trnK-UUU	gene	translation-rna	−	1672	4254	2582
matK	gene	other	−	1962	3489	1527
rps16	gene	ribosomal-protein	−	5155	6314	1159
trnQ-UUG	gene	translation-rna	−	7059	7131	72
psbK	gene	photosystem-ii	+	7455	7641	186
psbI	gene	photosystem-ii	+	8032	8143	111
trnS-GCU	gene	translation-rna	−	8261	8349	88
trnG-UCC	gene	translation-rna	+	9047	9804	757
trnR-UCU	gene	translation-rna	+	9978	10050	72
atpA	gene	atp-synthase	−	10146	11670	1524
atpF	gene	atp-synthase	−	11751	12980	1229
atpH	gene	atp-synthase	−	13339	13585	246
atpI	gene	atp-synthase	−	14572	15316	744
rps2	gene	ribosomal-protein	−	15661	16372	711
rpoC2	gene	rna-polymerase	−	16586	20792	4206
rpoC1	gene	rna-polymerase	−	20946	23783	2837
rpoB	gene	rna-polymerase	−	23809	27022	3213
trnC-GCA	gene	translation-rna	+	28182	28253	71
petN	gene	cytochrome	+	28961	29051	90
psbM	gene	photosystem-ii	−	30041	30146	105
trnD-GUC	gene	translation-rna	−	30671	30745	74
trnY-GUA	gene	translation-rna	−	30858	30942	84
trnE-UUC	gene	translation-rna	−	31001	31074	73
trnT-GGU	gene	translation-rna	+	31649	31721	72
psbD	gene	photosystem-ii	+	33025	34087	1062
psbC	gene	photosystem-ii	+	34034	35456	1422
trnS-UGA	gene	translation-rna	−	35691	35783	92
psbZ	gene	photosystem-ii	+	36098	36287	189
trnG-GCC	gene	translation-rna	+	36565	36636	71
trnfM-CAU	gene	translation-rna	−	36784	36858	74
rps14	gene	ribosomal-protein	−	37012	37315	303
psaB	gene	photosystem-i	−	37443	39648	2205
psaA	gene	photosystem-i	−	39673	41926	2253
ycf3	gene	other	−	42635	44556	1921
trnS-GGA	gene	translation-rna	+	45438	45525	87
rps4	gene	ribosomal-protein	−	45800	46406	606
trnT-UGU	gene	translation-rna	−	46750	46823	73
trnL-UAA	gene	translation-rna	+	47494	48054	560
trnF-GAA	gene	translation-rna	+	48354	48427	73
ndhJ	gene	nad-dehydrogenase	−	49074	49551	477
ndhK	gene	nad-dehydrogenase	−	49659	50421	762
ndhC	gene	nad-dehydrogenase	−	50390	50753	363
trnV-UAC	gene	translation-rna	−	51727	52380	653
trnM-CAU	gene	translation-rna	+	52568	52641	73
atpE	gene	atp-synthase	−	52834	53236	402
atpB	gene	atp-synthase	−	53232	54729	1497
rbcL	gene	other	+	55479	56943	1464
accD	gene	other	+	57656	59135	1479
psaI	gene	photosystem-i	+	59841	59952	111
ycf4	gene	other	+	60385	60940	555
cemA	gene	other	+	61688	62288	600
petA	gene	cytochrome	+	62494	63457	963
psbJ	gene	photosystem-ii	−	64463	64586	123
psbL	gene	photosystem-ii	−	64719	64941	222
psbF	gene	photosystem-ii	−	64859	64979	120
psbE	gene	photosystem-ii	−	64993	65245	252
petL	gene	cytochrome	+	66122	66218	96
petG	gene	cytochrome	+	66393	66507	114
trnW-CCA	gene	translation-rna	−	66625	66699	74
trnP-UGG	gene	translation-rna	−	66868	66942	74
psaJ	gene	photosystem-i	+	67213	67348	135
rpl33	gene	ribosomal-protein	+	67823	68024	201
rps18	gene	ribosomal-protein	+	68198	68504	306
rpl20	gene	ribosomal-protein	−	68738	69125	387
rps12	gene	ribosomal-protein	−	69919	97971	28052
rps12	gene	ribosomal-protein	+	69919	138519	68600
clpP	gene	other	−	70174	72103	1929
psbB	gene	photosystem-ii	+	72554	74081	1527
psbT	gene	photosystem-ii	+	74272	74380	108
psbN	gene	photosystem-ii	−	74440	74572	132
psbH	gene	photosystem-ii	+	74675	74897	222
petB	gene	cytochrome	+	75021	76392	1371
petD	gene	cytochrome	+	76574	77781	1207
rpoA	gene	rna-polymerase	−	78135	78936	801
rps11	gene	ribosomal-protein	−	79007	79424	417
rpl36	gene	ribosomal-protein	−	79525	79639	114
infA	gene	other	−	79733	79967	234
rps8	gene	ribosomal-protein	−	80090	80501	411
rpl14	gene	ribosomal-protein	−	80652	81021	369
rpl16	gene	ribosomal-protein	−	81147	82381	1234
rps3	gene	ribosomal-protein	−	82536	83199	663
rpl22	gene	ribosomal-protein	−	83200	83656	456
rps19	gene	ribosomal-protein	−	83715	83994	279
rpl2	gene	ribosomal-protein	−	84048	85530	1482
rpl23	gene	ribosomal-protein	−	85548	85830	282
trnI-CAU	gene	translation-rna	−	85989	86063	74
ycf2	gene	other	+	86151	92952	6801
ycf15	gene	other	+	93093	93291	198
trnL-CAA	gene	translation-rna	−	93550	93631	81
ndhB	gene	nad-dehydrogenase	−	94173	96385	2212
rps7	gene	ribosomal-protein	−	96659	97127	468
trnV-GAC	gene	translation-rna	+	99542	99614	72
rrn16	gene	ribosomal-rna	+	99840	101331	1491
trnI-GAU	gene	translation-rna	+	101629	102649	1020
trnA-UGC	gene	translation-rna	+	102713	103600	887
rrn23	gene	ribosomal-rna	+	103769	106581	2812
rrn4.5	gene	ribosomal-rna	+	106679	106782	103
rrn5	gene	ribosomal-rna	+	107029	107150	121
trnR-ACG	gene	translation-rna	+	107384	107458	74
trnN-GUU	gene	translation-rna	−	108006	108078	72
ndhF	gene	nad-dehydrogenase	−	109134	111396	2262
rpl32	gene	ribosomal-protein	+	111723	111900	177
trnL-UAG	gene	translation-rna	+	112343	112423	80
ccsA	gene	other	+	112524	113499	975
ndhD	gene	nad-dehydrogenase	−	113755	115285	1530
psaC	gene	photosystem-i	−	115385	115631	246
ndhE	gene	nad-dehydrogenase	−	115886	116192	306
ndhG	gene	nad-dehydrogenase	−	116408	116939	531
ndhI	gene	nad-dehydrogenase	−	117309	117810	501
ndhA	gene	nad-dehydrogenase	−	117895	120017	2122
ndhH	gene	nad-dehydrogenase	−	120018	121230	1212
rps15	gene	ribosomal-protein	−	121296	121569	273
ycf1	gene	other	−	121766	127403	5637
trnN-GUU	gene	translation-rna	+	127621	127693	72
trnR-ACG	gene	translation-rna	−	128241	128315	74
rrn5	gene	ribosomal-rna	−	128549	128670	121
rrn4.5	gene	ribosomal-rna	−	128917	129020	103
rrn23	gene	ribosomal-rna	−	129118	131930	2812
trnA-UGC	gene	translation-rna	−	132099	132986	887
trnI-GAU	gene	translation-rna	−	133050	134070	1020
ycf68	gene	other	−	133621	133915	294
rrn16	gene	ribosomal-rna	−	134368	135859	1491
trnV-GAC	gene	translation-rna	−	136085	136157	72
rps7	gene	ribosomal-protein	+	138572	139040	468
ndhB	gene	nad-dehydrogenase	+	139314	141526	2212
trnL-CAA	gene	translation-rna	+	142068	142149	81
ycf15	gene	other	−	142408	142606	198
ycf2	gene	other	−	142747	149548	6801
trnI-CAU	gene	translation-rna	+	149636	149710	74
rpl23	gene	ribosomal-protein	+	149869	150151	282
rpl2	gene	ribosomal-protein	+	150169	151651	1482

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomePQ058238.1DNA · accDPQ058238DNA · atpBPQ058238DNA · matKPQ058238DNA · ndhFPQ058238DNA · psbAPQ058238DNA · rbcLPQ058238DNA · rps12PQ058238DNA · ycf1PQ058238