Coordinate-aware organelle record

Scutellaria pekinensis var. pekinensis chloroplast genome

Available PQ059333.1 151,972 bp 133 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

133 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	11	85	74
psbA	gene	photosystem-ii	−	435	1494	1059
trnK-UUU	gene	translation-rna	−	1735	4309	2574
matK	gene	other	−	2024	3554	1530
rps16	gene	ribosomal-protein	−	5185	6357	1172
trnQ-UUG	gene	translation-rna	−	7482	7554	72
psbK	gene	photosystem-ii	+	7875	8061	186
psbI	gene	photosystem-ii	+	8448	8559	111
trnS-GCU	gene	translation-rna	−	8674	8762	88
trnG-UCC	gene	translation-rna	+	9390	10143	753
trnR-UCU	gene	translation-rna	+	10317	10389	72
atpA	gene	atp-synthase	−	10485	12009	1524
atpF	gene	atp-synthase	−	12098	13327	1229
atpH	gene	atp-synthase	−	13690	13936	246
atpI	gene	atp-synthase	−	14910	15654	744
rps2	gene	ribosomal-protein	−	15998	16835	837
rpoC2	gene	rna-polymerase	−	16922	21128	4206
rpoC1	gene	rna-polymerase	−	21282	24124	2842
rpoB	gene	rna-polymerase	−	24150	27363	3213
trnC-GCA	gene	translation-rna	+	28519	28590	71
petN	gene	cytochrome	+	28891	28981	90
psbM	gene	photosystem-ii	−	30121	30226	105
trnD-GUC	gene	translation-rna	−	30752	30826	74
trnY-GUA	gene	translation-rna	−	30944	31028	84
trnE-UUC	gene	translation-rna	−	31087	31160	73
trnT-GGU	gene	translation-rna	+	31728	31800	72
psbD	gene	photosystem-ii	+	33120	34182	1062
psbC	gene	photosystem-ii	+	34129	35551	1422
trnS-UGA	gene	translation-rna	−	35785	35877	92
psbZ	gene	photosystem-ii	+	36193	36382	189
trnG-GCC	gene	translation-rna	+	36653	36724	71
trnfM-CAU	gene	translation-rna	−	36870	36944	74
rps14	gene	ribosomal-protein	−	37093	37396	303
psaB	gene	photosystem-i	−	37523	39728	2205
psaA	gene	photosystem-i	−	39753	42006	2253
ycf3	gene	other	−	42694	44617	1923
trnS-GGA	gene	translation-rna	+	45512	45599	87
rps4	gene	ribosomal-protein	−	45880	46486	606
trnT-UGU	gene	translation-rna	−	46826	46899	73
trnL-UAA	gene	translation-rna	+	47589	48165	576
trnF-GAA	gene	translation-rna	+	48474	48547	73
ndhJ	gene	nad-dehydrogenase	−	49193	49670	477
ndhK	gene	nad-dehydrogenase	−	49778	50456	678
ndhC	gene	nad-dehydrogenase	−	50508	50871	363
trnV-UAC	gene	translation-rna	−	51812	52465	653
trnM-CAU	gene	translation-rna	+	52653	52726	73
atpE	gene	atp-synthase	−	52934	53336	402
atpB	gene	atp-synthase	−	53332	54829	1497
rbcL	gene	other	+	55572	57036	1464
accD	gene	other	+	57757	59236	1479
psaI	gene	photosystem-i	+	59954	60065	111
ycf4	gene	other	+	60498	61053	555
cemA	gene	other	+	61795	62395	600
petA	gene	cytochrome	+	62596	63559	963
psbJ	gene	photosystem-ii	−	64569	64692	123
psbL	gene	photosystem-ii	−	64825	65047	222
psbF	gene	photosystem-ii	−	64965	65085	120
psbE	gene	photosystem-ii	−	65099	65351	252
petL	gene	cytochrome	+	66219	66315	96
petG	gene	cytochrome	+	66490	66604	114
trnW-CCA	gene	translation-rna	−	66722	66796	74
trnP-UGG	gene	translation-rna	−	66965	67039	74
psaJ	gene	photosystem-i	+	67246	67444	198
rpl33	gene	ribosomal-protein	+	67920	68121	201
rps18	gene	ribosomal-protein	+	68295	68601	306
rpl20	gene	ribosomal-protein	−	68835	69222	387
rps12	gene	ribosomal-protein	−	70006	98125	28119
rps12	gene	ribosomal-protein	+	70006	138701	68695
clpP	gene	other	−	70274	72216	1942
psbB	gene	photosystem-ii	+	72673	74200	1527
psbT	gene	photosystem-ii	+	74390	74498	108
psbN	gene	photosystem-ii	−	74558	74690	132
psbH	gene	photosystem-ii	+	74793	75015	222
petB	gene	cytochrome	+	75139	76508	1369
petD	gene	cytochrome	+	76696	77893	1197
rpoA	gene	rna-polymerase	−	78268	79069	801
rps11	gene	ribosomal-protein	−	79140	79557	417
rpl36	gene	ribosomal-protein	−	79658	79772	114
infA	gene	other	−	79866	80100	234
rps8	gene	ribosomal-protein	−	80222	80633	411
rpl14	gene	ribosomal-protein	−	80789	81158	369
rpl16	gene	ribosomal-protein	−	81284	82525	1241
rps3	gene	ribosomal-protein	−	82680	83343	663
rpl22	gene	ribosomal-protein	−	83344	83800	456
rps19	gene	ribosomal-protein	−	83859	84138	279
rpl2	gene	ribosomal-protein	−	84193	85675	1482
rpl23	gene	ribosomal-protein	−	85693	85975	282
trnI-CAU	gene	translation-rna	−	86134	86208	74
ycf2	gene	other	+	86296	93106	6810
ycf15	gene	other	+	93247	93445	198
trnL-CAA	gene	translation-rna	−	93704	93785	81
ndhB	gene	nad-dehydrogenase	−	94327	96539	2212
rps7	gene	ribosomal-protein	−	96813	97281	468
trnV-GAC	gene	translation-rna	+	99696	99768	72
rrn16	gene	ribosomal-rna	+	99994	101485	1491
trnI-GAU	gene	translation-rna	+	101783	102803	1020
trnA-UGC	gene	translation-rna	+	102867	103755	888
rrn23	gene	ribosomal-rna	+	103929	106741	2812
rrn4.5	gene	ribosomal-rna	+	106839	106942	103
rrn5	gene	ribosomal-rna	+	107189	107310	121
trnR-ACG	gene	translation-rna	+	107544	107618	74
trnN-GUU	gene	translation-rna	−	108174	108246	72
ndhF	gene	nad-dehydrogenase	−	109322	111563	2241
rpl32	gene	ribosomal-protein	+	112075	112252	177
trnL-UAG	gene	translation-rna	+	112537	112617	80
ccsA	gene	other	+	112710	113685	975
ndhD	gene	nad-dehydrogenase	−	113918	115448	1530
psaC	gene	photosystem-i	−	115549	115795	246
ndhE	gene	nad-dehydrogenase	−	116050	116356	306
ndhG	gene	nad-dehydrogenase	−	116577	117108	531
ndhI	gene	nad-dehydrogenase	−	117471	117972	501
ndhA	gene	nad-dehydrogenase	−	118052	120159	2107
ndhH	gene	nad-dehydrogenase	−	120160	121342	1182
rps15	gene	ribosomal-protein	−	121438	121711	273
ycf1	gene	other	−	121925	127571	5646
trnN-GUU	gene	translation-rna	+	127789	127861	72
trnR-ACG	gene	translation-rna	−	128417	128491	74
rrn5	gene	ribosomal-rna	−	128725	128846	121
rrn4.5	gene	ribosomal-rna	−	129093	129196	103
rrn23	gene	ribosomal-rna	−	129294	132106	2812
trnA-UGC	gene	translation-rna	−	132280	133168	888
trnI-GAU	gene	translation-rna	−	133232	134252	1020
ycf68	gene	other	−	133803	134097	294
rrn16	gene	ribosomal-rna	−	134550	136041	1491
trnV-GAC	gene	translation-rna	−	136267	136339	72
rps7	gene	ribosomal-protein	+	138754	139222	468
ndhB	gene	nad-dehydrogenase	+	139496	141708	2212
trnL-CAA	gene	translation-rna	+	142250	142331	81
ycf15	gene	other	−	142590	142788	198
ycf2	gene	other	−	142929	149739	6810
trnI-CAU	gene	translation-rna	+	149827	149901	74
rpl23	gene	ribosomal-protein	+	150060	150342	282
rpl2	gene	ribosomal-protein	+	150360	151842	1482

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomePQ059333.1DNA · accDPQ059333DNA · atpBPQ059333DNA · matKPQ059333DNA · ndhFPQ059333DNA · psbAPQ059333DNA · rbcLPQ059333DNA · rps12PQ059333DNA · ycf1PQ059333