Coordinate-aware organelle record

Scutellaria pekinensis var. transitra chloroplast genome

Available PQ059299.1 152,465 bp 133 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

133 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	2	76	74
psbA	gene	photosystem-ii	−	379	1438	1059
trnK-UUU	gene	translation-rna	−	1671	4259	2588
matK	gene	other	−	1966	3502	1536
rps16	gene	ribosomal-protein	−	5157	6318	1161
trnQ-UUG	gene	translation-rna	−	7434	7506	72
psbK	gene	photosystem-ii	+	7830	8016	186
psbI	gene	photosystem-ii	+	8406	8517	111
trnS-GCU	gene	translation-rna	−	8635	8723	88
trnG-UCC	gene	translation-rna	+	9401	10163	762
trnR-UCU	gene	translation-rna	+	10337	10409	72
atpA	gene	atp-synthase	−	10505	12029	1524
atpF	gene	atp-synthase	−	12111	13339	1228
atpH	gene	atp-synthase	−	13697	13943	246
atpI	gene	atp-synthase	−	14942	15686	744
rps2	gene	ribosomal-protein	−	16033	16744	711
rpoC2	gene	rna-polymerase	−	16955	21161	4206
rpoC1	gene	rna-polymerase	−	21311	24152	2841
rpoB	gene	rna-polymerase	−	24178	27391	3213
trnC-GCA	gene	translation-rna	+	28556	28627	71
petN	gene	cytochrome	+	29329	29419	90
psbM	gene	photosystem-ii	−	30426	30540	114
trnD-GUC	gene	translation-rna	−	31073	31147	74
trnY-GUA	gene	translation-rna	−	31260	31344	84
trnE-UUC	gene	translation-rna	−	31403	31476	73
trnT-GGU	gene	translation-rna	+	32058	32130	72
psbD	gene	photosystem-ii	+	33439	34501	1062
psbC	gene	photosystem-ii	+	34448	35870	1422
trnS-UGA	gene	translation-rna	−	36103	36195	92
psbZ	gene	photosystem-ii	+	36514	36703	189
trnG-GCC	gene	translation-rna	+	36974	37045	71
trnfM-CAU	gene	translation-rna	−	37197	37271	74
rps14	gene	ribosomal-protein	−	37420	37723	303
psaB	gene	photosystem-i	−	37850	40055	2205
psaA	gene	photosystem-i	−	40080	42333	2253
ycf3	gene	other	−	43000	44924	1924
trnS-GGA	gene	translation-rna	+	45809	45896	87
rps4	gene	ribosomal-protein	−	46181	46787	606
trnT-UGU	gene	translation-rna	−	47131	47204	73
trnL-UAA	gene	translation-rna	+	47845	48414	569
trnF-GAA	gene	translation-rna	+	48718	48791	73
ndhJ	gene	nad-dehydrogenase	−	49439	49916	477
ndhK	gene	nad-dehydrogenase	−	50023	50701	678
ndhC	gene	nad-dehydrogenase	−	50753	51116	363
trnV-UAC	gene	translation-rna	−	52084	52737	653
trnM-CAU	gene	translation-rna	+	52918	52991	73
atpE	gene	atp-synthase	−	53200	53602	402
atpB	gene	atp-synthase	−	53598	55086	1488
rbcL	gene	other	+	55846	57310	1464
accD	gene	other	+	58039	59506	1467
psaI	gene	photosystem-i	+	60222	60333	111
ycf4	gene	other	+	60766	61321	555
cemA	gene	other	+	62062	62662	600
petA	gene	cytochrome	+	62868	63831	963
psbJ	gene	photosystem-ii	−	64855	64978	123
psbL	gene	photosystem-ii	−	65111	65333	222
psbF	gene	photosystem-ii	−	65251	65371	120
psbE	gene	photosystem-ii	−	65385	65637	252
petL	gene	cytochrome	+	66545	66641	96
petG	gene	cytochrome	+	66816	66930	114
trnW-CCA	gene	translation-rna	−	67048	67122	74
trnP-UGG	gene	translation-rna	−	67291	67365	74
psaJ	gene	photosystem-i	+	67637	67772	135
rpl33	gene	ribosomal-protein	+	68248	68449	201
rps18	gene	ribosomal-protein	+	68623	68929	306
rpl20	gene	ribosomal-protein	−	69165	69552	387
rps12	gene	ribosomal-protein	−	70348	98477	28129
rps12	gene	ribosomal-protein	+	70348	139249	68901
clpP	gene	other	−	70616	72549	1933
psbB	gene	photosystem-ii	+	73022	74549	1527
psbT	gene	photosystem-ii	+	74741	74843	102
psbN	gene	photosystem-ii	−	74916	75048	132
psbH	gene	photosystem-ii	+	75151	75373	222
petB	gene	cytochrome	+	75497	76864	1367
petD	gene	cytochrome	+	77052	78255	1203
rpoA	gene	rna-polymerase	−	78417	79431	1014
rps11	gene	ribosomal-protein	−	79502	79919	417
rpl36	gene	ribosomal-protein	−	80020	80134	114
infA	gene	other	−	80229	80463	234
rps8	gene	ribosomal-protein	−	80582	80993	411
rpl14	gene	ribosomal-protein	−	81160	81529	369
rpl16	gene	ribosomal-protein	−	81655	82899	1244
rps3	gene	ribosomal-protein	−	83053	83716	663
rpl22	gene	ribosomal-protein	−	83717	84173	456
rps19	gene	ribosomal-protein	−	84232	84511	279
rpl2	gene	ribosomal-protein	−	84566	86049	1483
rpl23	gene	ribosomal-protein	−	86067	86349	282
trnI-CAU	gene	translation-rna	−	86497	86571	74
ycf2	gene	other	+	86659	93469	6810
ycf15	gene	other	+	93559	93808	249
trnL-CAA	gene	translation-rna	−	94056	94137	81
ndhB	gene	nad-dehydrogenase	−	94679	96837	2158
rps7	gene	ribosomal-protein	−	97165	97633	468
trnV-GAC	gene	translation-rna	+	100054	100126	72
rrn16	gene	ribosomal-rna	+	100353	101844	1491
trnI-GAU	gene	translation-rna	+	102142	103163	1021
trnA-UGC	gene	translation-rna	+	103227	104108	881
rrn23	gene	ribosomal-rna	+	104277	107090	2813
rrn4.5	gene	ribosomal-rna	+	107188	107291	103
rrn5	gene	ribosomal-rna	+	107538	107659	121
trnR-ACG	gene	translation-rna	+	107893	107967	74
trnN-GUU	gene	translation-rna	−	108513	108585	72
ndhF	gene	nad-dehydrogenase	−	109661	111902	2241
rpl32	gene	ribosomal-protein	+	112423	112600	177
trnL-UAG	gene	translation-rna	+	113040	113120	80
ccsA	gene	other	+	113217	114192	975
ndhD	gene	nad-dehydrogenase	−	114424	115927	1503
psaC	gene	photosystem-i	−	116046	116292	246
ndhE	gene	nad-dehydrogenase	−	116548	116854	306
ndhG	gene	nad-dehydrogenase	−	117084	117615	531
ndhI	gene	nad-dehydrogenase	−	117980	118481	501
ndhA	gene	nad-dehydrogenase	−	118561	120661	2100
ndhH	gene	nad-dehydrogenase	−	120662	121844	1182
rps15	gene	ribosomal-protein	−	121947	122220	273
ycf1	gene	other	−	122486	128132	5646
trnN-GUU	gene	translation-rna	+	128350	128422	72
trnR-ACG	gene	translation-rna	−	128968	129042	74
rrn5	gene	ribosomal-rna	−	129276	129397	121
rrn4.5	gene	ribosomal-rna	−	129644	129747	103
rrn23	gene	ribosomal-rna	−	129845	132658	2813
trnA-UGC	gene	translation-rna	−	132827	133708	881
trnI-GAU	gene	translation-rna	−	133772	134793	1021
ycf68	gene	other	−	134398	134638	240
rrn16	gene	ribosomal-rna	−	135091	136582	1491
trnV-GAC	gene	translation-rna	−	136809	136881	72
rps7	gene	ribosomal-protein	+	139302	139770	468
ndhB	gene	nad-dehydrogenase	+	140098	142256	2158
trnL-CAA	gene	translation-rna	+	142798	142879	81
ycf15	gene	other	−	143127	143376	249
ycf2	gene	other	−	143466	150276	6810
trnI-CAU	gene	translation-rna	+	150364	150438	74
rpl23	gene	ribosomal-protein	+	150586	150868	282
rpl2	gene	ribosomal-protein	+	150886	152369	1483

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomePQ059299.1DNA · accDPQ059299DNA · atpBPQ059299DNA · matKPQ059299DNA · ndhFPQ059299DNA · psbAPQ059299DNA · rbcLPQ059299DNA · rps12PQ059299DNA · ycf1PQ059299