Coordinate-aware organelle record

Scutellaria peregrina chloroplast genome

Available PQ059200.1 152,024 bp 133 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

133 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	3	77	74
psbA	gene	photosystem-ii	−	394	1453	1059
trnK-UUU	gene	translation-rna	−	1694	4288	2594
matK	gene	other	−	1983	3528	1545
rps16	gene	ribosomal-protein	−	5195	6368	1173
trnQ-UUG	gene	translation-rna	−	7479	7551	72
psbK	gene	photosystem-ii	+	7875	8061	186
psbI	gene	photosystem-ii	+	8458	8569	111
trnS-GCU	gene	translation-rna	−	8667	8755	88
trnG-UCC	gene	translation-rna	+	9451	10206	755
trnR-UCU	gene	translation-rna	+	10371	10443	72
atpA	gene	atp-synthase	−	10539	12063	1524
atpF	gene	atp-synthase	−	12146	13375	1229
atpH	gene	atp-synthase	−	13745	13991	246
atpI	gene	atp-synthase	−	14984	15728	744
rps2	gene	ribosomal-protein	−	16075	16786	711
rpoC2	gene	rna-polymerase	−	17003	21203	4200
rpoC1	gene	rna-polymerase	−	21357	24176	2819
rpoB	gene	rna-polymerase	−	24202	27415	3213
trnC-GCA	gene	translation-rna	+	28584	28655	71
petN	gene	cytochrome	+	29390	29480	90
psbM	gene	photosystem-ii	−	30516	30621	105
trnD-GUC	gene	translation-rna	−	31152	31226	74
trnY-GUA	gene	translation-rna	−	31339	31423	84
trnE-UUC	gene	translation-rna	−	31482	31555	73
trnT-GGU	gene	translation-rna	+	32126	32198	72
psbD	gene	photosystem-ii	+	33504	34566	1062
psbC	gene	photosystem-ii	+	34513	35935	1422
trnS-UGA	gene	translation-rna	−	36169	36261	92
psbZ	gene	photosystem-ii	+	36580	36769	189
trnG-GCC	gene	translation-rna	+	37041	37112	71
trnfM-CAU	gene	translation-rna	−	37256	37330	74
rps14	gene	ribosomal-protein	−	37479	37782	303
psaB	gene	photosystem-i	−	37912	40117	2205
psaA	gene	photosystem-i	−	40142	42395	2253
ycf3	gene	other	−	43098	45024	1926
trnS-GGA	gene	translation-rna	+	45899	45986	87
rps4	gene	ribosomal-protein	−	46265	46871	606
trnT-UGU	gene	translation-rna	−	47212	47285	73
trnL-UAA	gene	translation-rna	+	47952	48519	567
trnF-GAA	gene	translation-rna	+	48824	48897	73
ndhJ	gene	nad-dehydrogenase	−	49546	50023	477
ndhK	gene	nad-dehydrogenase	−	50127	50805	678
ndhC	gene	nad-dehydrogenase	−	50857	51220	363
trnV-UAC	gene	translation-rna	−	52208	52867	659
trnM-CAU	gene	translation-rna	+	53047	53120	73
atpE	gene	atp-synthase	−	53328	53730	402
atpB	gene	atp-synthase	−	53726	55223	1497
rbcL	gene	other	+	55970	57434	1464
accD	gene	other	+	58167	59658	1491
psaI	gene	photosystem-i	+	59895	60006	111
ycf4	gene	other	+	60439	60994	555
cemA	gene	other	+	61607	62207	600
petA	gene	cytochrome	+	62413	63382	969
psbJ	gene	photosystem-ii	−	64402	64525	123
psbL	gene	photosystem-ii	−	64658	64775	117
psbF	gene	photosystem-ii	−	64798	64918	120
psbE	gene	photosystem-ii	−	64932	65184	252
petL	gene	cytochrome	+	66106	66202	96
petG	gene	cytochrome	+	66377	66491	114
trnW-CCA	gene	translation-rna	−	66599	66673	74
trnP-UGG	gene	translation-rna	−	66842	66916	74
psaJ	gene	photosystem-i	+	67188	67323	135
rpl33	gene	ribosomal-protein	+	67796	67997	201
rps18	gene	ribosomal-protein	+	68171	68477	306
rpl20	gene	ribosomal-protein	−	68717	69104	387
rps12	gene	ribosomal-protein	−	69900	98006	28106
rps12	gene	ribosomal-protein	+	69900	138785	68885
clpP	gene	other	−	70155	72095	1940
psbB	gene	photosystem-ii	+	72548	74075	1527
psbT	gene	photosystem-ii	+	74254	74362	108
psbN	gene	photosystem-ii	−	74422	74554	132
psbH	gene	photosystem-ii	+	74657	74879	222
petB	gene	cytochrome	+	75003	76372	1369
petD	gene	cytochrome	+	76560	77772	1212
rpoA	gene	rna-polymerase	−	77934	78948	1014
rps11	gene	ribosomal-protein	−	79019	79436	417
rpl36	gene	ribosomal-protein	−	79537	79651	114
infA	gene	other	−	79746	79980	234
rps8	gene	ribosomal-protein	−	80102	80513	411
rpl14	gene	ribosomal-protein	−	80678	81047	369
rpl16	gene	ribosomal-protein	−	81173	82405	1232
rps3	gene	ribosomal-protein	−	82559	83222	663
rpl22	gene	ribosomal-protein	−	83223	83679	456
rps19	gene	ribosomal-protein	−	83738	84017	279
rpl2	gene	ribosomal-protein	−	84072	85555	1483
rpl23	gene	ribosomal-protein	−	85573	85855	282
trnI-CAU	gene	translation-rna	−	86014	86088	74
ycf2	gene	other	+	86176	92986	6810
ycf15	gene	other	+	93127	93325	198
trnL-CAA	gene	translation-rna	−	93585	93666	81
ndhB	gene	nad-dehydrogenase	−	94208	96420	2212
rps7	gene	ribosomal-protein	−	96694	97162	468
trnV-GAC	gene	translation-rna	+	99578	99650	72
rrn16	gene	ribosomal-rna	+	99872	101363	1491
trnI-GAU	gene	translation-rna	+	101661	102680	1019
trnA-UGC	gene	translation-rna	+	102744	103633	889
rrn23	gene	ribosomal-rna	+	103802	106614	2812
rrn4.5	gene	ribosomal-rna	+	106712	106815	103
rrn5	gene	ribosomal-rna	+	107062	107183	121
trnR-ACG	gene	translation-rna	+	107417	107491	74
trnN-GUU	gene	translation-rna	−	108046	108118	72
ndhF	gene	nad-dehydrogenase	−	109194	111435	2241
rpl32	gene	ribosomal-protein	+	111923	112127	204
trnL-UAG	gene	translation-rna	+	112562	112642	80
ccsA	gene	other	+	112730	113705	975
ndhD	gene	nad-dehydrogenase	−	113942	115445	1503
psaC	gene	photosystem-i	−	115578	115824	246
ndhE	gene	nad-dehydrogenase	−	116079	116385	306
ndhG	gene	nad-dehydrogenase	−	116608	117139	531
ndhI	gene	nad-dehydrogenase	−	117487	117988	501
ndhA	gene	nad-dehydrogenase	−	118068	120178	2110
ndhH	gene	nad-dehydrogenase	−	120179	121361	1182
rps15	gene	ribosomal-protein	−	121457	121730	273
ycf1	gene	other	−	121997	127664	5667
trnN-GUU	gene	translation-rna	+	127882	127954	72
trnR-ACG	gene	translation-rna	−	128509	128583	74
rrn5	gene	ribosomal-rna	−	128817	128938	121
rrn4.5	gene	ribosomal-rna	−	129185	129288	103
rrn23	gene	ribosomal-rna	−	129386	132198	2812
trnA-UGC	gene	translation-rna	−	132367	133256	889
trnI-GAU	gene	translation-rna	−	133320	134339	1019
ycf68	gene	other	−	133890	134184	294
rrn16	gene	ribosomal-rna	−	134637	136128	1491
trnV-GAC	gene	translation-rna	−	136350	136422	72
rps7	gene	ribosomal-protein	+	138838	139306	468
ndhB	gene	nad-dehydrogenase	+	139580	141792	2212
trnL-CAA	gene	translation-rna	+	142334	142415	81
ycf15	gene	other	−	142675	142873	198
ycf2	gene	other	−	143014	149824	6810
trnI-CAU	gene	translation-rna	+	149912	149986	74
rpl23	gene	ribosomal-protein	+	150145	150427	282
rpl2	gene	ribosomal-protein	+	150445	151928	1483

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomePQ059200.1DNA · accDPQ059200DNA · atpBPQ059200DNA · matKPQ059200DNA · ndhFPQ059200DNA · psbAPQ059200DNA · rbcLPQ059200DNA · rps12PQ059200DNA · ycf1PQ059200