Scutellaria petiolata chloroplast
Biopython GenomeDiagram 1.79; GenBank local location segments.
IR
IR
trnH-GUG · PQ059234.1 · 4–77 bp · −
psbA · PQ059234.1 · 377–1,435 bp · −
trnK-UUU · PQ059234.1 · 1,676–4,267 bp · −
matK · PQ059234.1 · 1,971–3,506 bp · −
rps16 · PQ059234.1 · 5,164–6,346 bp · −
trnQ-UUG · PQ059234.1 · 7,452–7,523 bp · −
trnS-GCU · PQ059234.1 · 8,638–8,725 bp · −
atpA · PQ059234.1 · 10,518–12,041 bp · −
atpF · PQ059234.1 · 12,124–13,352 bp · −
atpH · PQ059234.1 · 13,723–13,968 bp · −
atpI · PQ059234.1 · 14,972–15,715 bp · −
rps2 · PQ059234.1 · 16,063–16,773 bp · −
rpoC2 · PQ059234.1 · 16,990–21,189 bp · −
rpoC1 · PQ059234.1 · 21,335–24,171 bp · −
rpoB · PQ059234.1 · 24,198–27,404 bp · −
psbM · PQ059234.1 · 30,408–30,521 bp · −
trnD-GUC · PQ059234.1 · 31,048–31,121 bp · −
trnY-GUA · PQ059234.1 · 31,235–31,318 bp · −
trnE-UUC · PQ059234.1 · 31,378–31,450 bp · −
trnS-UGA · PQ059234.1 · 36,081–36,172 bp · −
trnfM-CAU · PQ059234.1 · 37,164–37,237 bp · −
rps14 · PQ059234.1 · 37,387–37,689 bp · −
psaB · PQ059234.1 · 37,817–40,021 bp · −
psaA · PQ059234.1 · 40,047–42,299 bp · −
ycf3 · PQ059234.1 · 43,013–44,936 bp · −
rps4 · PQ059234.1 · 46,201–46,806 bp · −
trnT-UGU · PQ059234.1 · 47,133–47,205 bp · −
ndhJ · PQ059234.1 · 49,471–49,833 bp · −
ndhK · PQ059234.1 · 50,051–50,728 bp · −
ndhC · PQ059234.1 · 50,781–51,137 bp · −
trnV-UAC · PQ059234.1 · 52,117–52,774 bp · −
atpE · PQ059234.1 · 53,237–53,638 bp · −
atpB · PQ059234.1 · 53,635–55,131 bp · −
psbJ · PQ059234.1 · 64,295–64,417 bp · −
psbL · PQ059234.1 · 64,551–64,667 bp · −
psbF · PQ059234.1 · 64,691–64,810 bp · −
psbE · PQ059234.1 · 64,825–65,076 bp · −
trnW-CCA · PQ059234.1 · 66,471–66,544 bp · −
trnP-UGG · PQ059234.1 · 66,706–66,779 bp · −
rpl20 · PQ059234.1 · 68,584–68,970 bp · −
rps12 · PQ059234.1 · 69,763–69,876 bp · −
rps12 · PQ059234.1 · 97,055–97,845 bp · −
clpP · PQ059234.1 · 70,020–71,954 bp · −
psbN · PQ059234.1 · 74,282–74,413 bp · −
rpoA · PQ059234.1 · 78,006–78,800 bp · −
rps11 · PQ059234.1 · 78,872–79,288 bp · −
rpl36 · PQ059234.1 · 79,390–79,503 bp · −
infA · PQ059234.1 · 79,599–79,832 bp · −
rps8 · PQ059234.1 · 79,955–80,365 bp · −
rpl14 · PQ059234.1 · 80,525–80,893 bp · −
rpl16 · PQ059234.1 · 81,020–82,244 bp · −
rps3 · PQ059234.1 · 82,399–83,061 bp · −
rpl22 · PQ059234.1 · 83,063–83,518 bp · −
rps19 · PQ059234.1 · 83,578–83,856 bp · −
rpl2 · PQ059234.1 · 83,911–85,393 bp · −
rpl23 · PQ059234.1 · 85,412–85,693 bp · −
trnI-CAU · PQ059234.1 · 85,853–85,926 bp · −
trnL-CAA · PQ059234.1 · 93,425–93,505 bp · −
ndhB · PQ059234.1 · 94,048–96,205 bp · −
rps7 · PQ059234.1 · 96,534–97,001 bp · −
trnN-GUU · PQ059234.1 · 107,878–107,949 bp · −
ndhF · PQ059234.1 · 110,455–111,339 bp · −
ndhD · PQ059234.1 · 113,858–115,366 bp · −
psaC · PQ059234.1 · 115,470–115,715 bp · −
ndhE · PQ059234.1 · 115,971–116,276 bp · −
ndhG · PQ059234.1 · 116,857–117,030 bp · −
ndhI · PQ059234.1 · 117,382–117,882 bp · −
ndhA · PQ059234.1 · 117,963–120,062 bp · −
ndhH · PQ059234.1 · 120,064–121,275 bp · −
rps15 · PQ059234.1 · 121,342–121,674 bp · −
ycf1 · PQ059234.1 · 121,885–127,500 bp · −
trnR-ACG · PQ059234.1 · 128,344–128,417 bp · −
rrn5 · PQ059234.1 · 128,652–128,772 bp · −
rrn4.5 · PQ059234.1 · 129,020–129,122 bp · −
rrn23 · PQ059234.1 · 129,221–132,032 bp · −
trnA-UGC · PQ059234.1 · 132,202–133,092 bp · −
trnI-GAU · PQ059234.1 · 133,157–134,176 bp · −
ycf68 · PQ059234.1 · 133,728–134,021 bp · −
rrn16 · PQ059234.1 · 134,475–135,965 bp · −
trnV-GAC · PQ059234.1 · 136,188–136,259 bp · −
ycf15 · PQ059234.1 · 142,499–142,696 bp · −
ycf2 · PQ059234.1 · 142,838–149,653 bp · −
psbK · PQ059234.1 · 7,848–8,033 bp · +
psbI · PQ059234.1 · 8,424–8,534 bp · +
trnG-UCC · PQ059234.1 · 9,431–10,184 bp · +
trnR-UCU · PQ059234.1 · 10,350–10,421 bp · +
trnC-GCA · PQ059234.1 · 28,580–28,650 bp · +
petN · PQ059234.1 · 29,380–29,469 bp · +
trnT-GGU · PQ059234.1 · 32,030–32,101 bp · +
psbD · PQ059234.1 · 33,415–34,476 bp · +
psbC · PQ059234.1 · 34,424–35,845 bp · +
psbZ · PQ059234.1 · 36,492–36,680 bp · +
trnG-GCC · PQ059234.1 · 36,950–37,020 bp · +
trnS-GGA · PQ059234.1 · 45,820–45,906 bp · +
trnL-UAA · PQ059234.1 · 47,904–48,460 bp · +
trnF-GAA · PQ059234.1 · 48,766–48,838 bp · +
trnM-CAU · PQ059234.1 · 52,955–53,027 bp · +
rbcL · PQ059234.1 · 55,869–57,332 bp · +
accD · PQ059234.1 · 58,062–59,546 bp · +
psaI · PQ059234.1 · 59,783–59,893 bp · +
ycf4 · PQ059234.1 · 60,327–60,881 bp · +
cemA · PQ059234.1 · 61,513–62,112 bp · +
petA · PQ059234.1 · 62,319–63,281 bp · +
petL · PQ059234.1 · 65,978–66,073 bp · +
petG · PQ059234.1 · 66,249–66,362 bp · +
psaJ · PQ059234.1 · 66,988–67,185 bp · +
rpl33 · PQ059234.1 · 67,662–67,862 bp · +
rps18 · PQ059234.1 · 68,038–68,343 bp · +
rps12 · PQ059234.1 · 137,823–138,613 bp · +
psbB · PQ059234.1 · 72,408–73,934 bp · +
psbT · PQ059234.1 · 74,114–74,221 bp · +
psbH · PQ059234.1 · 74,517–74,738 bp · +
petB · PQ059234.1 · 74,863–76,232 bp · +
petD · PQ059234.1 · 76,421–77,631 bp · +
ycf2 · PQ059234.1 · 86,015–92,830 bp · +
ycf15 · PQ059234.1 · 92,972–93,169 bp · +
trnV-GAC · PQ059234.1 · 99,409–99,480 bp · +
rrn16 · PQ059234.1 · 99,703–101,193 bp · +
trnI-GAU · PQ059234.1 · 101,492–102,511 bp · +
trnA-UGC · PQ059234.1 · 102,576–103,466 bp · +
rrn23 · PQ059234.1 · 103,636–106,447 bp · +
rrn4.5 · PQ059234.1 · 106,546–106,648 bp · +
rrn5 · PQ059234.1 · 106,896–107,016 bp · +
trnR-ACG · PQ059234.1 · 107,251–107,324 bp · +
rpl32 · PQ059234.1 · 111,833–112,036 bp · +
trnL-UAG · PQ059234.1 · 112,470–112,549 bp · +
ccsA · PQ059234.1 · 112,651–113,625 bp · +
trnN-GUU · PQ059234.1 · 127,719–127,790 bp · +
rps7 · PQ059234.1 · 138,667–139,134 bp · +
ndhB · PQ059234.1 · 139,463–141,620 bp · +
trnL-CAA · PQ059234.1 · 142,163–142,243 bp · +
trnI-CAU · PQ059234.1 · 149,742–149,815 bp · +
rpl23 · PQ059234.1 · 149,975–150,256 bp · +
rpl2 · PQ059234.1 · 150,275–151,757 bp · +
0 kb
13 kb
26 kb
39 kb
52 kb
65 kb
78 kb
91 kb
104 kb
117 kb
130 kb
143 kb
Scutellaria petiolata
ANNOTATED PLASTOME
PQ059234.1
151,852 bp · 133 genes
Gene function
Transfer RNA
Photosystem II
Other
Ribosomal protein
ATP synthase
RNA polymerase
Cytochrome
Photosystem I
NADH dehydrogenase
Ribosomal RNA
0 37963 75926 113889 151852 bp
Forward strand 5′ → 3′
psbK psbI trnG-UCC trnR-UCU trnC-GCA petN trnT-GGU psbD psbC psbZ trnG-GCC trnS-GGA trnL-UAA trnF-GAA trnM-CAU rbcL accD psaI ycf4 cemA petA petL petG psaJ rpl33 rps18 psbB psbT psbH petB petD ycf2 ycf15 trnV-GAC rrn16 trnI-GAU trnA-UGC rrn23 rrn4.5 rrn5 trnR-ACG rpl32 trnL-UAG ccsA trnN-GUU rps12 rps7 ndhB trnL-CAA trnI-CAU rpl23 rpl2
trnH-GUG psbA trnK-UUU matK rps16 trnQ-UUG trnS-GCU atpA atpF atpH atpI rps2 rpoC2 rpoC1 rpoB psbM trnD-GUC trnY-GUA trnE-UUC trnS-UGA trnfM-CAU rps14 psaB psaA ycf3 rps4 trnT-UGU ndhJ ndhK ndhC trnV-UAC atpE atpB psbJ psbL psbF psbE trnW-CCA trnP-UGG rpl20 rps12 clpP psbN rpoA rps11 rpl36 infA rps8 rpl14 rpl16 rps3 rpl22 rps19 rpl2 rpl23 trnI-CAU trnL-CAA ndhB rps7 rps12 trnN-GUU ndhF ndhD psaC ndhE ndhG ndhI ndhA ndhH rps15 ycf1 trnR-ACG rrn5 rrn4.5 rrn23 trnA-UGC trnI-GAU ycf68 rrn16 trnV-GAC ycf15 ycf2
Reverse strand 3′ ← 5′
Outer ring: forward strand; inner ring: reverse strand. The innermost ring shows overall GC percentage. GenBank gene locations may include introns; discontinuous parts are drawn separately. Hover for coordinates; click a segment to open its gene page. Biopython GenomeDiagram .
Gene-position browser Map and table selections are linked. Each row is one local segment; coordinates are 1-based and inclusive.
134 local segments
Gene Type Group Strand Start End Length
trnH-GUG gene − 4 77 74 Locate
psbA gene − 377 1435 1059 Locate
trnK-UUU gene − 1676 4267 2592 Locate
matK gene − 1971 3506 1536 Locate
rps16 gene − 5164 6346 1183 Locate
trnQ-UUG gene − 7452 7523 72 Locate
psbK gene + 7848 8033 186 Locate
psbI gene + 8424 8534 111 Locate
trnS-GCU gene − 8638 8725 88 Locate
trnG-UCC gene + 9431 10184 754 Locate
trnR-UCU gene + 10350 10421 72 Locate
atpA gene − 10518 12041 1524 Locate
atpF gene − 12124 13352 1229 Locate
atpH gene − 13723 13968 246 Locate
atpI gene − 14972 15715 744 Locate
rps2 gene − 16063 16773 711 Locate
rpoC2 gene − 16990 21189 4200 Locate
rpoC1 gene − 21335 24171 2837 Locate
rpoB gene − 24198 27404 3207 Locate
trnC-GCA gene + 28580 28650 71 Locate
petN gene + 29380 29469 90 Locate
psbM gene − 30408 30521 114 Locate
trnD-GUC gene − 31048 31121 74 Locate
trnY-GUA gene − 31235 31318 84 Locate
trnE-UUC gene − 31378 31450 73 Locate
trnT-GGU gene + 32030 32101 72 Locate
psbD gene + 33415 34476 1062 Locate
psbC gene + 34424 35845 1422 Locate
trnS-UGA gene − 36081 36172 92 Locate
psbZ gene + 36492 36680 189 Locate
trnG-GCC gene + 36950 37020 71 Locate
trnfM-CAU gene − 37164 37237 74 Locate
rps14 gene − 37387 37689 303 Locate
psaB gene − 37817 40021 2205 Locate
psaA gene − 40047 42299 2253 Locate
ycf3 gene − 43013 44936 1924 Locate
trnS-GGA gene + 45820 45906 87 Locate
rps4 gene − 46201 46806 606 Locate
trnT-UGU gene − 47133 47205 73 Locate
trnL-UAA gene + 47904 48460 557 Locate
trnF-GAA gene + 48766 48838 73 Locate
ndhJ gene − 49471 49833 363 Locate
ndhK gene − 50051 50728 678 Locate
ndhC gene − 50781 51137 357 Locate
trnV-UAC gene − 52117 52774 658 Locate
trnM-CAU gene + 52955 53027 73 Locate
atpE gene − 53237 53638 402 Locate
atpB gene − 53635 55131 1497 Locate
rbcL gene + 55869 57332 1464 Locate
accD gene + 58062 59546 1485 Locate
psaI gene + 59783 59893 111 Locate
ycf4 gene + 60327 60881 555 Locate
cemA gene + 61513 62112 600 Locate
petA gene + 62319 63281 963 Locate
psbJ gene − 64295 64417 123 Locate
psbL gene − 64551 64667 117 Locate
psbF gene − 64691 64810 120 Locate
psbE gene − 64825 65076 252 Locate
petL gene + 65978 66073 96 Locate
petG gene + 66249 66362 114 Locate
trnW-CCA gene − 66471 66544 74 Locate
trnP-UGG gene − 66706 66779 74 Locate
psaJ gene + 66988 67185 198 Locate
rpl33 gene + 67662 67862 201 Locate
rps18 gene + 68038 68343 306 Locate
rpl20 gene − 68584 68970 387 Locate
rps12 gene − 69763 69876 114 Locate
clpP gene − 70020 71954 1935 Locate
psbB gene + 72408 73934 1527 Locate
psbT gene + 74114 74221 108 Locate
psbN gene − 74282 74413 132 Locate
psbH gene + 74517 74738 222 Locate
petB gene + 74863 76232 1370 Locate
petD gene + 76421 77631 1211 Locate
rpoA gene − 78006 78800 795 Locate
rps11 gene − 78872 79288 417 Locate
rpl36 gene − 79390 79503 114 Locate
infA gene − 79599 79832 234 Locate
rps8 gene − 79955 80365 411 Locate
rpl14 gene − 80525 80893 369 Locate
rpl16 gene − 81020 82244 1225 Locate
rps3 gene − 82399 83061 663 Locate
rpl22 gene − 83063 83518 456 Locate
rps19 gene − 83578 83856 279 Locate
rpl2 gene − 83911 85393 1483 Locate
rpl23 gene − 85412 85693 282 Locate
trnI-CAU gene − 85853 85926 74 Locate
ycf2 gene + 86015 92830 6816 Locate
ycf15 gene + 92972 93169 198 Locate
trnL-CAA gene − 93425 93505 81 Locate
ndhB gene − 94048 96205 2158 Locate
rps7 gene − 96534 97001 468 Locate
rps12 gene − 97055 97845 791 Locate
trnV-GAC gene + 99409 99480 72 Locate
rrn16 gene + 99703 101193 1491 Locate
trnI-GAU gene + 101492 102511 1020 Locate
trnA-UGC gene + 102576 103466 891 Locate
rrn23 gene + 103636 106447 2812 Locate
rrn4.5 gene + 106546 106648 103 Locate
rrn5 gene + 106896 107016 121 Locate
trnR-ACG gene + 107251 107324 74 Locate
trnN-GUU gene − 107878 107949 72 Locate
ndhF gene − 110455 111339 885 Locate
rpl32 gene + 111833 112036 204 Locate
trnL-UAG gene + 112470 112549 80 Locate
ccsA gene + 112651 113625 975 Locate
ndhD gene − 113858 115366 1509 Locate
psaC gene − 115470 115715 246 Locate
ndhE gene − 115971 116276 306 Locate
ndhG gene − 116857 117030 174 Locate
ndhI gene − 117382 117882 501 Locate
ndhA gene − 117963 120062 2100 Locate
ndhH gene − 120064 121275 1212 Locate
rps15 gene − 121342 121674 333 Locate
ycf1 gene − 121885 127500 5616 Locate
trnN-GUU gene + 127719 127790 72 Locate
trnR-ACG gene − 128344 128417 74 Locate
rrn5 gene − 128652 128772 121 Locate
rrn4.5 gene − 129020 129122 103 Locate
rrn23 gene − 129221 132032 2812 Locate
trnA-UGC gene − 132202 133092 891 Locate
trnI-GAU gene − 133157 134176 1020 Locate
ycf68 gene − 133728 134021 294 Locate
rrn16 gene − 134475 135965 1491 Locate
trnV-GAC gene − 136188 136259 72 Locate
rps12 gene + 137823 138613 791 Locate
rps7 gene + 138667 139134 468 Locate
ndhB gene + 139463 141620 2158 Locate
trnL-CAA gene + 142163 142243 81 Locate
ycf15 gene − 142499 142696 198 Locate
ycf2 gene − 142838 149653 6816 Locate
trnI-CAU gene + 149742 149815 74 Locate
rpl23 gene + 149975 150256 282 Locate
rpl2 gene + 150275 151757 1483 Locate
Status Available
Accession PQ059234.1
Length 151,852 bp
GC content 38.2%
Annotated genes 133
Gene sequence records 8
Translation Rna 37 Photosystem Ii 15 Other 15 Ribosomal Protein 26 Atp Synthase 6 Rna Polymerase 4 Cytochrome 6 Photosystem I 5 Nad Dehydrogenase 12 Ribosomal Rna 8
SSR 0
Direct 0
Inverted 2
Palindromic 0
Sources and evidence boundary Accessions, release scope and coordinate evidence remain visible beside the visualization.
Full species sources