Coordinate-aware organelle record

Scutellaria pinnatifida subsp. alpina chloroplast genome

Available PQ059206.1 151,861 bp 133 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

133 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	3	77	74
psbA	gene	photosystem-ii	−	373	1432	1059
trnK-UUU	gene	translation-rna	−	1673	4255	2582
matK	gene	other	−	1963	3490	1527
rps16	gene	ribosomal-protein	−	5156	6316	1160
trnQ-UUG	gene	translation-rna	−	7049	7121	72
psbK	gene	photosystem-ii	+	7445	7631	186
psbI	gene	photosystem-ii	+	8020	8131	111
trnS-GCU	gene	translation-rna	−	8252	8340	88
trnG-UCC	gene	translation-rna	+	9042	9799	757
trnR-UCU	gene	translation-rna	+	9973	10045	72
atpA	gene	atp-synthase	−	10141	11665	1524
atpF	gene	atp-synthase	−	11746	12975	1229
atpH	gene	atp-synthase	−	13330	13576	246
atpI	gene	atp-synthase	−	14563	15307	744
rps2	gene	ribosomal-protein	−	15652	16363	711
rpoC2	gene	rna-polymerase	−	16578	20784	4206
rpoC1	gene	rna-polymerase	−	20938	23775	2837
rpoB	gene	rna-polymerase	−	23801	27014	3213
trnC-GCA	gene	translation-rna	+	28175	28246	71
petN	gene	cytochrome	+	28962	29052	90
psbM	gene	photosystem-ii	−	30146	30251	105
trnD-GUC	gene	translation-rna	−	30776	30850	74
trnY-GUA	gene	translation-rna	−	30963	31047	84
trnE-UUC	gene	translation-rna	−	31106	31179	73
trnT-GGU	gene	translation-rna	+	31754	31826	72
psbD	gene	photosystem-ii	+	33131	34193	1062
psbC	gene	photosystem-ii	+	34140	35562	1422
trnS-UGA	gene	translation-rna	−	35796	35888	92
psbZ	gene	photosystem-ii	+	36203	36392	189
trnG-GCC	gene	translation-rna	+	36666	36737	71
trnfM-CAU	gene	translation-rna	−	36882	36956	74
rps14	gene	ribosomal-protein	−	37105	37408	303
psaB	gene	photosystem-i	−	37536	39741	2205
psaA	gene	photosystem-i	−	39766	42019	2253
ycf3	gene	other	−	42723	44647	1924
trnS-GGA	gene	translation-rna	+	45529	45616	87
rps4	gene	ribosomal-protein	−	45891	46497	606
trnT-UGU	gene	translation-rna	−	46838	46911	73
trnL-UAA	gene	translation-rna	+	47591	48151	560
trnF-GAA	gene	translation-rna	+	48452	48525	73
ndhJ	gene	nad-dehydrogenase	−	49173	49650	477
ndhK	gene	nad-dehydrogenase	−	49758	50520	762
ndhC	gene	nad-dehydrogenase	−	50489	50852	363
trnV-UAC	gene	translation-rna	−	51837	52490	653
trnM-CAU	gene	translation-rna	+	52678	52751	73
atpE	gene	atp-synthase	−	52944	53346	402
atpB	gene	atp-synthase	−	53342	54839	1497
rbcL	gene	other	+	55589	57053	1464
accD	gene	other	+	57767	59246	1479
psaI	gene	photosystem-i	+	59952	60063	111
ycf4	gene	other	+	60496	61051	555
cemA	gene	other	+	61799	62399	600
petA	gene	cytochrome	+	62605	63568	963
psbJ	gene	photosystem-ii	−	64577	64700	123
psbL	gene	photosystem-ii	−	64833	64950	117
psbF	gene	photosystem-ii	−	64973	65093	120
psbE	gene	photosystem-ii	−	65107	65359	252
petL	gene	cytochrome	+	66236	66332	96
petG	gene	cytochrome	+	66507	66621	114
trnW-CCA	gene	translation-rna	−	66739	66813	74
trnP-UGG	gene	translation-rna	−	66982	67056	74
psaJ	gene	photosystem-i	+	67327	67462	135
rpl33	gene	ribosomal-protein	+	67944	68145	201
rps18	gene	ribosomal-protein	+	68319	68625	306
rpl20	gene	ribosomal-protein	−	68859	69246	387
rps12	gene	ribosomal-protein	−	70040	98096	28056
rps12	gene	ribosomal-protein	+	70040	138629	68589
clpP	gene	other	−	70295	72224	1929
psbB	gene	photosystem-ii	+	72675	74202	1527
psbT	gene	photosystem-ii	+	74393	74501	108
psbN	gene	photosystem-ii	−	74561	74693	132
psbH	gene	photosystem-ii	+	74796	75018	222
petB	gene	cytochrome	+	75142	76517	1375
petD	gene	cytochrome	+	76699	77906	1207
rpoA	gene	rna-polymerase	−	78260	79061	801
rps11	gene	ribosomal-protein	−	79132	79549	417
rpl36	gene	ribosomal-protein	−	79650	79764	114
infA	gene	other	−	79858	80092	234
rps8	gene	ribosomal-protein	−	80214	80625	411
rpl14	gene	ribosomal-protein	−	80777	81146	369
rpl16	gene	ribosomal-protein	−	81272	82506	1234
rps3	gene	ribosomal-protein	−	82661	83324	663
rpl22	gene	ribosomal-protein	−	83325	83781	456
rps19	gene	ribosomal-protein	−	83840	84119	279
rpl2	gene	ribosomal-protein	−	84173	85655	1482
rpl23	gene	ribosomal-protein	−	85673	85955	282
trnI-CAU	gene	translation-rna	−	86114	86188	74
ycf2	gene	other	+	86276	93077	6801
ycf15	gene	other	+	93218	93416	198
trnL-CAA	gene	translation-rna	−	93675	93756	81
ndhB	gene	nad-dehydrogenase	−	94298	96456	2158
rps7	gene	ribosomal-protein	−	96784	97252	468
trnV-GAC	gene	translation-rna	+	99667	99739	72
rrn16	gene	ribosomal-rna	+	99965	101456	1491
trnI-GAU	gene	translation-rna	+	101754	102775	1021
trnA-UGC	gene	translation-rna	+	102839	103726	887
rrn23	gene	ribosomal-rna	+	103888	106700	2812
rrn4.5	gene	ribosomal-rna	+	106798	106901	103
rrn5	gene	ribosomal-rna	+	107148	107269	121
trnR-ACG	gene	translation-rna	+	107503	107577	74
trnN-GUU	gene	translation-rna	−	108125	108197	72
ndhF	gene	nad-dehydrogenase	−	109253	111515	2262
rpl32	gene	ribosomal-protein	+	111842	112019	177
trnL-UAG	gene	translation-rna	+	112465	112545	80
ccsA	gene	other	+	112646	113621	975
ndhD	gene	nad-dehydrogenase	−	113877	115407	1530
psaC	gene	photosystem-i	−	115507	115753	246
ndhE	gene	nad-dehydrogenase	−	116008	116314	306
ndhG	gene	nad-dehydrogenase	−	116530	117061	531
ndhI	gene	nad-dehydrogenase	−	117427	117928	501
ndhA	gene	nad-dehydrogenase	−	118013	120135	2122
ndhH	gene	nad-dehydrogenase	−	120136	121318	1182
rps15	gene	ribosomal-protein	−	121414	121687	273
ycf1	gene	other	−	121882	127519	5637
trnN-GUU	gene	translation-rna	+	127737	127809	72
trnR-ACG	gene	translation-rna	−	128357	128431	74
rrn5	gene	ribosomal-rna	−	128665	128786	121
rrn4.5	gene	ribosomal-rna	−	129033	129136	103
rrn23	gene	ribosomal-rna	−	129234	132046	2812
trnA-UGC	gene	translation-rna	−	132208	133095	887
trnI-GAU	gene	translation-rna	−	133159	134180	1021
ycf68	gene	other	−	133731	134025	294
rrn16	gene	ribosomal-rna	−	134478	135969	1491
trnV-GAC	gene	translation-rna	−	136195	136267	72
rps7	gene	ribosomal-protein	+	138682	139150	468
ndhB	gene	nad-dehydrogenase	+	139478	141636	2158
trnL-CAA	gene	translation-rna	+	142178	142259	81
ycf15	gene	other	−	142518	142716	198
ycf2	gene	other	−	142857	149658	6801
trnI-CAU	gene	translation-rna	+	149746	149820	74
rpl23	gene	ribosomal-protein	+	149979	150261	282
rpl2	gene	ribosomal-protein	+	150279	151761	1482

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomePQ059206.1DNA · accDPQ059206DNA · atpBPQ059206DNA · matKPQ059206DNA · ndhFPQ059206DNA · psbAPQ059206DNA · rbcLPQ059206DNA · rps12PQ059206DNA · ycf1PQ059206