Coordinate-aware organelle record

Scutellaria pinnatifida subsp. mucida chloroplast genome

Available MW420948.1 151,813 bp 132 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

132 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	3	77	74
psbA	gene	photosystem-ii	−	372	1431	1059
trnK-UUU	gene	translation-rna	−	1668	4242	2574
matK	gene	other	−	1954	3481	1527
rps16	gene	ribosomal-protein	−	5148	6309	1161
trnQ-UUC	gene	translation-rna	−	7053	7125	72
psbK	gene	photosystem-ii	+	7449	7635	186
psbI	gene	photosystem-ii	+	8024	8135	111
trnS-GCU	gene	translation-rna	−	8253	8341	88
trnG-CGA	gene	translation-rna	+	9056	9814	758
trnR-UCU	gene	translation-rna	+	9988	10060	72
atpA	gene	atp-synthase	−	10156	11680	1524
atpF	gene	atp-synthase	−	11761	12991	1230
atpH	gene	atp-synthase	−	13351	13597	246
atpI	gene	atp-synthase	−	14584	15328	744
rps2	gene	ribosomal-protein	−	15673	16384	711
rpoC2	gene	rna-polymerase	−	16599	20805	4206
rpoC1	gene	rna-polymerase	−	20959	23796	2837
rpoB	gene	rna-polymerase	−	23822	27035	3213
trnC-GCA	gene	translation-rna	+	28195	28266	71
petN	gene	cytochrome	+	28980	29070	90
psbM	gene	photosystem-ii	−	30073	30178	105
trnD-GUC	gene	translation-rna	−	30703	30777	74
trnY-GUA	gene	translation-rna	−	30890	30974	84
trnE-UUC	gene	translation-rna	−	31033	31106	73
trnT-GGU	gene	translation-rna	+	31681	31753	72
psbD	gene	photosystem-ii	+	33058	34120	1062
psbC	gene	photosystem-ii	+	34067	35489	1422
trnS-UCA	gene	translation-rna	−	35723	35816	93
psbZ	gene	photosystem-ii	+	36131	36320	189
trnG-GCC	gene	translation-rna	+	36600	36671	71
trnfM-CAU	gene	translation-rna	−	36819	36893	74
rps14	gene	ribosomal-protein	−	37047	37350	303
psaB	gene	photosystem-i	−	37478	39683	2205
psaA	gene	photosystem-i	−	39708	41961	2253
ycf3	gene	other	−	42667	44589	1922
trnS-GGA	gene	translation-rna	+	45471	45558	87
rps4	gene	ribosomal-protein	−	45833	46439	606
trnT-UGU	gene	translation-rna	−	46780	46853	73
trnL-UAA	gene	translation-rna	+	47533	48094	561
trnF-GAA	gene	translation-rna	+	48394	48467	73
ndhJ	gene	nad-dehydrogenase	−	49115	49592	477
ndhK	gene	nad-dehydrogenase	−	49700	50378	678
ndhC	gene	nad-dehydrogenase	−	50431	50794	363
trnV-UAC	gene	translation-rna	−	51779	52432	653
trnM-CAU	gene	translation-rna	+	52620	52693	73
atpE	gene	atp-synthase	−	52886	53288	402
atpB	gene	atp-synthase	−	53284	54781	1497
rbcL	gene	other	+	55552	56995	1443
accD	gene	other	+	57708	59187	1479
psaI	gene	photosystem-i	+	59893	60004	111
ycf4	gene	other	+	60437	60992	555
cemA	gene	other	+	61651	62341	690
petA	gene	cytochrome	+	62547	63510	963
pabJ	gene	other	−	64518	64641	123
psbL	gene	photosystem-ii	−	64774	64891	117
psbF	gene	photosystem-ii	−	64914	65034	120
psbE	gene	photosystem-ii	−	65048	65300	252
petL	gene	cytochrome	+	66177	66273	96
petG	gene	cytochrome	+	66448	66562	114
trnW-CCA	gene	translation-rna	−	66680	66754	74
trnP-UGG	gene	translation-rna	−	66923	66997	74
psbJ	gene	photosystem-ii	+	67268	67403	135
rpl33	gene	ribosomal-protein	+	67886	68087	201
rps18	gene	ribosomal-protein	+	68261	68567	306
rpl20	gene	ribosomal-protein	−	68800	69187	387
rps12	gene	ribosomal-protein	−	69969	98034	28065
rps12	gene	ribosomal-protein	+	69969	138581	68612
clpP	gene	other	−	70236	72164	1928
psbB	gene	photosystem-ii	+	72615	74142	1527
psbT	gene	photosystem-ii	+	74333	74441	108
psbN	gene	photosystem-ii	−	74501	74633	132
psbH	gene	photosystem-ii	+	74736	74958	222
petB	gene	cytochrome	+	75082	76454	1372
petD	gene	cytochrome	+	76636	77843	1207
rpoA	gene	rna-polymerase	−	78197	78998	801
rps11	gene	ribosomal-protein	−	79069	79486	417
rpl36	gene	ribosomal-protein	−	79587	79701	114
infA	gene	other	−	79795	80029	234
rps8	gene	ribosomal-protein	−	80152	80563	411
rpl14	gene	ribosomal-protein	−	80715	81084	369
rpl16	gene	ribosomal-protein	−	81210	82444	1234
rps3	gene	ribosomal-protein	−	82599	83262	663
rpl22	gene	ribosomal-protein	−	83263	83719	456
rps19	gene	ribosomal-protein	−	83778	84057	279
rpl2	gene	ribosomal-protein	−	84111	85593	1482
rpl23	gene	ribosomal-protein	−	85611	85893	282
trnI-CAU	gene	translation-rna	−	86052	86126	74
ycf2	gene	other	+	86214	93015	6801
ycf15	gene	other	+	93156	93354	198
trnL-CAA	gene	translation-rna	−	93613	93694	81
ndhB	gene	nad-dehydrogenase	−	94236	96448	2212
rps7	gene	ribosomal-protein	−	96722	97190	468
trnV-GAC	gene	translation-rna	+	99605	99677	72
rrn16	gene	ribosomal-rna	+	99903	101394	1491
trnI-GAU	gene	translation-rna	+	101692	102712	1020
trnA-UGC	gene	translation-rna	+	102777	103663	886
rrn23	gene	ribosomal-rna	+	103832	106644	2812
rrn4.5	gene	ribosomal-rna	+	106742	106845	103
rrn5	gene	ribosomal-rna	+	107092	107213	121
trnR-ACG	gene	translation-rna	+	107447	107521	74
trnN-GUU	gene	translation-rna	+	108069	108141	72
ndhF	gene	nad-dehydrogenase	−	109197	111459	2262
rpl32	gene	ribosomal-protein	+	111786	111963	177
trnL-UAG	gene	translation-rna	+	112409	112489	80
ccsA	gene	other	+	112590	113565	975
ndhD	gene	nad-dehydrogenase	−	113821	115351	1530
psaC	gene	photosystem-i	−	115451	115697	246
ndhE	gene	nad-dehydrogenase	−	115952	116258	306
ndhG	gene	nad-dehydrogenase	−	116474	117005	531
ndhI	gene	nad-dehydrogenase	−	117371	117872	501
ndhA	gene	nad-dehydrogenase	−	117957	120079	2122
ndhH	gene	nad-dehydrogenase	−	120080	121262	1182
rps15	gene	ribosomal-protein	−	121358	121631	273
ycf1	gene	other	−	121828	127354	5526
trnN-GUU	gene	translation-rna	+	127683	127755	72
trnR-ACG	gene	translation-rna	−	128303	128377	74
rrn5	gene	ribosomal-rna	−	128611	128732	121
rrn4.5	gene	ribosomal-rna	−	128979	129082	103
rrn23	gene	ribosomal-rna	−	129180	131992	2812
trnA-UGC	gene	translation-rna	−	132161	133047	886
trnI-GAU	gene	translation-rna	−	133112	134132	1020
rrn16	gene	ribosomal-rna	−	134430	135921	1491
trnV-GAC	gene	translation-rna	−	136147	136219	72
rps7	gene	ribosomal-protein	+	138634	139102	468
ndhB	gene	nad-dehydrogenase	+	139376	141588	2212
trnL-CAA	gene	translation-rna	+	142130	142211	81
ycf15	gene	other	−	142470	142668	198
ycf2	gene	other	−	142809	149610	6801
trnI-CAU	gene	translation-rna	+	149698	149772	74
rpl23	gene	ribosomal-protein	+	149931	150213	282
rpl2	gene	ribosomal-protein	+	150231	151713	1482

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomeMW420948.1DNA · accDMW420948DNA · atpBMW420948DNA · matKMW420948DNA · ndhFMW420948DNA · psbAMW420948DNA · rbcLMW420948DNA · rps12MW420948DNA · ycf1MW420948