Coordinate-aware organelle record

Scutellaria pinnatifida chloroplast genome

Available PQ059326.1 151,802 bp 133 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

133 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	3	77	74
psbA	gene	photosystem-ii	−	373	1432	1059
trnK-UUU	gene	translation-rna	−	1673	4255	2582
matK	gene	other	−	1963	3490	1527
rps16	gene	ribosomal-protein	−	5157	6320	1163
trnQ-UUG	gene	translation-rna	−	7055	7127	72
psbK	gene	photosystem-ii	+	7451	7637	186
psbI	gene	photosystem-ii	+	8026	8137	111
trnS-GCU	gene	translation-rna	−	8256	8344	88
trnG-UCC	gene	translation-rna	+	9047	9804	757
trnR-UCU	gene	translation-rna	+	9977	10049	72
atpA	gene	atp-synthase	−	10145	11669	1524
atpF	gene	atp-synthase	−	11750	12980	1230
atpH	gene	atp-synthase	−	13335	13581	246
atpI	gene	atp-synthase	−	14568	15312	744
rps2	gene	ribosomal-protein	−	15657	16368	711
rpoC2	gene	rna-polymerase	−	16583	20789	4206
rpoC1	gene	rna-polymerase	−	20943	23780	2837
rpoB	gene	rna-polymerase	−	23806	27019	3213
trnC-GCA	gene	translation-rna	+	28179	28250	71
petN	gene	cytochrome	+	28968	29058	90
psbM	gene	photosystem-ii	−	30061	30166	105
trnD-GUC	gene	translation-rna	−	30691	30765	74
trnY-GUA	gene	translation-rna	−	30878	30962	84
trnE-UUC	gene	translation-rna	−	31021	31094	73
trnT-GGU	gene	translation-rna	+	31669	31741	72
psbD	gene	photosystem-ii	+	33045	34107	1062
psbC	gene	photosystem-ii	+	34054	35476	1422
trnS-UGA	gene	translation-rna	−	35711	35803	92
psbZ	gene	photosystem-ii	+	36118	36307	189
trnG-GCC	gene	translation-rna	+	36582	36653	71
trnfM-CAU	gene	translation-rna	−	36800	36874	74
rps14	gene	ribosomal-protein	−	37028	37331	303
psaB	gene	photosystem-i	−	37459	39664	2205
psaA	gene	photosystem-i	−	39689	41942	2253
ycf3	gene	other	−	42646	44571	1925
trnS-GGA	gene	translation-rna	+	45453	45540	87
rps4	gene	ribosomal-protein	−	45815	46421	606
trnT-UGU	gene	translation-rna	−	46762	46835	73
trnL-UAA	gene	translation-rna	+	47515	48075	560
trnF-GAA	gene	translation-rna	+	48377	48450	73
ndhJ	gene	nad-dehydrogenase	−	49098	49575	477
ndhK	gene	nad-dehydrogenase	−	49683	50361	678
ndhC	gene	nad-dehydrogenase	−	50414	50777	363
trnV-UAC	gene	translation-rna	−	51762	52415	653
trnM-CAU	gene	translation-rna	+	52603	52676	73
atpE	gene	atp-synthase	−	52869	53271	402
atpB	gene	atp-synthase	−	53267	54764	1497
rbcL	gene	other	+	55514	56978	1464
accD	gene	other	+	57708	59187	1479
psaI	gene	photosystem-i	+	59893	60004	111
ycf4	gene	other	+	60437	60992	555
cemA	gene	other	+	61740	62340	600
petA	gene	cytochrome	+	62546	63509	963
psbJ	gene	photosystem-ii	−	64518	64641	123
psbL	gene	photosystem-ii	−	64774	64996	222
psbF	gene	photosystem-ii	−	64914	65034	120
psbE	gene	photosystem-ii	−	65048	65300	252
petL	gene	cytochrome	+	66177	66273	96
petG	gene	cytochrome	+	66448	66562	114
trnW-CCA	gene	translation-rna	−	66680	66754	74
trnP-UGG	gene	translation-rna	−	66923	66997	74
psaJ	gene	photosystem-i	+	67268	67403	135
rpl33	gene	ribosomal-protein	+	67886	68087	201
rps18	gene	ribosomal-protein	+	68261	68567	306
rpl20	gene	ribosomal-protein	−	68801	69188	387
rps12	gene	ribosomal-protein	−	69982	98033	28051
rps12	gene	ribosomal-protein	+	69982	138570	68588
clpP	gene	other	−	70237	72166	1929
psbB	gene	photosystem-ii	+	72617	74144	1527
psbT	gene	photosystem-ii	+	74335	74443	108
psbN	gene	photosystem-ii	−	74503	74635	132
psbH	gene	photosystem-ii	+	74738	74960	222
petB	gene	cytochrome	+	75084	76453	1369
petD	gene	cytochrome	+	76635	77842	1207
rpoA	gene	rna-polymerase	−	78196	78997	801
rps11	gene	ribosomal-protein	−	79068	79485	417
rpl36	gene	ribosomal-protein	−	79586	79700	114
infA	gene	other	−	79794	80028	234
rps8	gene	ribosomal-protein	−	80151	80562	411
rpl14	gene	ribosomal-protein	−	80714	81083	369
rpl16	gene	ribosomal-protein	−	81209	82443	1234
rps3	gene	ribosomal-protein	−	82598	83261	663
rpl22	gene	ribosomal-protein	−	83262	83718	456
rps19	gene	ribosomal-protein	−	83777	84056	279
rpl2	gene	ribosomal-protein	−	84110	85592	1482
rpl23	gene	ribosomal-protein	−	85610	85892	282
trnI-CAU	gene	translation-rna	−	86051	86125	74
ycf2	gene	other	+	86213	93014	6801
ycf15	gene	other	+	93104	93353	249
trnL-CAA	gene	translation-rna	−	93612	93693	81
ndhB	gene	nad-dehydrogenase	−	94235	96447	2212
rps7	gene	ribosomal-protein	−	96721	97189	468
trnV-GAC	gene	translation-rna	+	99604	99676	72
rrn16	gene	ribosomal-rna	+	99902	101393	1491
trnI-GAU	gene	translation-rna	+	101691	102712	1021
trnA-UGC	gene	translation-rna	+	102776	103663	887
rrn23	gene	ribosomal-rna	+	103825	106637	2812
rrn4.5	gene	ribosomal-rna	+	106735	106838	103
rrn5	gene	ribosomal-rna	+	107085	107206	121
trnR-ACG	gene	translation-rna	+	107440	107514	74
trnN-GUU	gene	translation-rna	−	108062	108134	72
ndhF	gene	nad-dehydrogenase	−	109190	111452	2262
rpl32	gene	ribosomal-protein	+	111780	111957	177
trnL-UAG	gene	translation-rna	+	112404	112484	80
ccsA	gene	other	+	112585	113560	975
ndhD	gene	nad-dehydrogenase	−	113816	115319	1503
psaC	gene	photosystem-i	−	115446	115692	246
ndhE	gene	nad-dehydrogenase	−	115947	116253	306
ndhG	gene	nad-dehydrogenase	−	116469	117000	531
ndhI	gene	nad-dehydrogenase	−	117366	117867	501
ndhA	gene	nad-dehydrogenase	−	117952	120074	2122
ndhH	gene	nad-dehydrogenase	−	120075	121257	1182
rps15	gene	ribosomal-protein	−	121353	121626	273
ycf1	gene	other	−	121823	127460	5637
trnN-GUU	gene	translation-rna	+	127678	127750	72
trnR-ACG	gene	translation-rna	−	128298	128372	74
rrn5	gene	ribosomal-rna	−	128606	128727	121
rrn4.5	gene	ribosomal-rna	−	128974	129077	103
rrn23	gene	ribosomal-rna	−	129175	131987	2812
trnA-UGC	gene	translation-rna	−	132149	133036	887
trnI-GAU	gene	translation-rna	−	133100	134121	1021
ycf68	gene	other	−	133672	133966	294
rrn16	gene	ribosomal-rna	−	134419	135910	1491
trnV-GAC	gene	translation-rna	−	136136	136208	72
rps7	gene	ribosomal-protein	+	138623	139091	468
ndhB	gene	nad-dehydrogenase	+	139365	141577	2212
trnL-CAA	gene	translation-rna	+	142119	142200	81
ycf15	gene	other	−	142459	142708	249
ycf2	gene	other	−	142798	149599	6801
trnI-CAU	gene	translation-rna	+	149687	149761	74
rpl23	gene	ribosomal-protein	+	149920	150202	282
rpl2	gene	ribosomal-protein	+	150220	151702	1482

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomePQ059326.1DNA · accDPQ059326DNA · atpBPQ059326DNA · matKPQ059326DNA · ndhFPQ059326DNA · psbAPQ059326DNA · rbcLPQ059326DNA · rps12PQ059326DNA · ycf1PQ059326